Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02365 and RBAM_013950
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:05
# Commandline: needle
# -asequence dna-align/BSNT_02365___ykuQ.1.9828.seq
# -bsequence dna-align/RBAM_013950___ykuQ.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02365___ykuQ-RBAM_013950___ykuQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02365___ykuQ-RBAM_013950___ykuQ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02365___ykuQ
# 2: RBAM_013950___ykuQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 714
# Identity: 607/714 (85.0%)
# Similarity: 607/714 (85.0%)
# Gaps: 6/714 ( 0.8%)
# Score: 2571.0
#
#
#=======================================
BSNT_02365___ 1 ATGAAAATGATGGACGCAAATGAAATTATTTCATTTATTCAAAATAGTAC 50
||||||||||||||.|||||||||||||||||||||||||||||||||||
RBAM_013950__ 1 ATGAAAATGATGGATGCAAATGAAATTATTTCATTTATTCAAAATAGTAC 50
BSNT_02365___ 51 AAAATCAACACCTGTAAAGGTTTACGTGAAAGGTGAGCTGGAAGGAATCA 100
|||||||||.||||||||.||.||.||.|||||.||.||.||||||||||
RBAM_013950__ 51 AAAATCAACGCCTGTAAAAGTGTATGTAAAAGGCGATCTTGAAGGAATCA 100
BSNT_02365___ 101 ATTTCGGCGAATCTGCGAAAGCTTTTATCAACGGAAACACTGGTGTCGTT 150
..||.|||||.||.||.|||.|.||..|.|||||..|..|.||.||||||
RBAM_013950__ 101 GCTTTGGCGATTCCGCTAAAACATTCCTGAACGGCCAATCCGGCGTCGTT 150
BSNT_02365___ 151 TTCGGTGAGTGGAGC-GAAATCCAAACAGCAATCGAAGAAAACCAAAG-C 198
||.||.|||||| || |||||..|||..|.|||||||||||| ||||| |
RBAM_013950__ 151 TTTGGCGAGTGG-GCTGAAATTAAAAGCGTAATCGAAGAAAA-CAAAGAC 198
BSNT_02365___ 199 AAAATCGAAGACTATGTGGTTGAAAATGACCGCCGCAATTCTGCGATCCC 248
|||||.||.||.||.||..|||||||||||||||||||.|||||||||||
RBAM_013950__ 199 AAAATTGAGGATTACGTCATTGAAAATGACCGCCGCAACTCTGCGATCCC 248
BSNT_02365___ 249 AATGCTTGATCTTAAAA-ACATCAAAGCGCGTATCGAGCCGGGCGCGATC 297
.||||||||| |||||| |..|.||||||.|.||||||||.|||||.||.
RBAM_013950__ 249 GATGCTTGAT-TTAAAAGATGTTAAAGCGAGAATCGAGCCCGGCGCTATT 297
BSNT_02365___ 298 ATCCGCGACCAAGTTGAAATCGGTGATAACGCAGTCATCATGATGGGTGC 347
|||||||||||||||||||||||.||.||.||.||.||||||||||||||
RBAM_013950__ 298 ATCCGCGACCAAGTTGAAATCGGCGACAATGCCGTTATCATGATGGGTGC 347
BSNT_02365___ 348 TTCTATTAATATCGGTTCAGTCATCGGCGAAGGCACAATGATTGATATGA 397
.||||||||||||||||||||||||||||||||.||.|||||||||||||
RBAM_013950__ 348 ATCTATTAATATCGGTTCAGTCATCGGCGAAGGTACGATGATTGATATGA 397
BSNT_02365___ 398 ACGTTGTGCTTGGCGGACGAGCTACTGTTGGAAAAAACTGCCATATCGGC 447
|||||||.||.||||||||.||.|||||.||.|||||||||||.|||||.
RBAM_013950__ 398 ACGTTGTTCTCGGCGGACGCGCGACTGTCGGCAAAAACTGCCACATCGGA 447
BSNT_02365___ 448 GCGGGTTCTGTACTTGCGGGCGTTATTGAGCCGCCATCCGCTAAACCGGT 497
||||||||||||.|.||||||||||||||||||||...||||||.||.||
RBAM_013950__ 448 GCGGGTTCTGTATTAGCGGGCGTTATTGAGCCGCCTAGCGCTAAGCCTGT 497
BSNT_02365___ 498 TGTGATTGAAGACGACGTCGTAATCGGCGCAAATGCTGTTGTGCTTGAAG 547
|||..|.|||||||||||.||.||||||||||||||.|||||||||||||
RBAM_013950__ 498 TGTCGTGGAAGACGACGTTGTGATCGGCGCAAATGCGGTTGTGCTTGAAG 547
BSNT_02365___ 548 GCGTAACAGTAGGTAAAGGAGCTGTTGTTGCTGCGGGCGCGATCGTGGTA 597
||||||||.|.||||||||.||.|||||.|||||.||.||.|||||.|||
RBAM_013950__ 548 GCGTAACAATCGGTAAAGGCGCGGTTGTCGCTGCCGGAGCCATCGTTGTA 597
BSNT_02365___ 598 AACGACGTTGAGCCATACACTGTCGTTGCAGGCACACCAGCTAAAAAAAT 647
||.|||||.||||||||.||.||.||.||.||.|||||.||.||||||||
RBAM_013950__ 598 AATGACGTCGAGCCATATACCGTTGTAGCGGGAACACCTGCGAAAAAAAT 647
BSNT_02365___ 648 CAAAGACATTGATGAAAAAACAAAAGGCAAAACTGAAATCAAGCAGGAAT 697
||||||.||.|||||||||||||||||||||||.||||||||.|||||||
RBAM_013950__ 648 CAAAGATATCGATGAAAAAACAAAAGGCAAAACAGAAATCAAACAGGAAT 697
BSNT_02365___ 698 TACGCCAGCTGTAA 711
||||||||||||||
RBAM_013950__ 698 TACGCCAGCTGTAA 711
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