Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02354 and RBAM_013850

See Amino acid alignment / Visit BSNT_02354 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:04
# Commandline: needle
#    -asequence dna-align/BSNT_02354___ykuF.1.9828.seq
#    -bsequence dna-align/RBAM_013850___ykuF.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02354___ykuF-RBAM_013850___ykuF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02354___ykuF-RBAM_013850___ykuF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02354___ykuF
# 2: RBAM_013850___ykuF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 765
# Identity:     713/765 (93.2%)
# Similarity:   713/765 (93.2%)
# Gaps:           0/765 ( 0.0%)
# Score: 3357.0
# 
#
#=======================================

BSNT_02354___      1 ATGGAAAAAAAGGCGGTAATTATTACCGGCGGGTCAAGCGGCATGGGAAA     50
                     |||||.||.||.||||||||.|||||.|||||.|||||||||||||||||
RBAM_013850__      1 ATGGATAAGAAAGCGGTAATCATTACAGGCGGTTCAAGCGGCATGGGAAA     50

BSNT_02354___     51 AGCGATGGCAAAAAAACAGGCTGAATTAGGGTGGCACGTTATGGTGACAG    100
                     |||.|||||.||||||||||||||||||||.||||||||.||||||||||
RBAM_013850__     51 AGCAATGGCGAAAAAACAGGCTGAATTAGGATGGCACGTCATGGTGACAG    100

BSNT_02354___    101 GGAGGAACCATGAGGCACTTGAGGAAACAAAAAAAGAAATTCAGACCTTT    150
                     |||||||||||||.|||||||||||||||||||||||||||.||||||||
RBAM_013850__    101 GGAGGAACCATGAAGCACTTGAGGAAACAAAAAAAGAAATTGAGACCTTT    150

BSNT_02354___    151 GAGGGACAGGTCGCTTGTTTTCAAATGGATGTCCGTTCCGATTCCGCCGC    200
                     ||||||||||||||.|||||||||||||||||||||||.|||||||||||
RBAM_013850__    151 GAGGGACAGGTCGCCTGTTTTCAAATGGATGTCCGTTCTGATTCCGCCGC    200

BSNT_02354___    201 TTCAGACATGATTAAAGAAGCGGTAAAAGCCTTTGGCCGGCTTGACGCGC    250
                     ||||||||||||||.|||||||..|||||.||||||||||||.||.||||
RBAM_013850__    201 TTCAGACATGATTACAGAAGCGAAAAAAGTCTTTGGCCGGCTCGATGCGC    250

BSNT_02354___    251 TGATTAACAACGCGGCCGGAAACTTTATTTGTCCGGCAGAAAAGCTGACG    300
                     ||||||||||.||||||||.|||||||||||.||||||||.|||||||||
RBAM_013850__    251 TGATTAACAATGCGGCCGGCAACTTTATTTGCCCGGCAGAGAAGCTGACG    300

BSNT_02354___    301 CCCAATGGATGGAAAGCCGTTATTGAGATTGTTTTAAACGGCACATTTTT    350
                     |||||||||||||||||.||||||||||||||||||||||||||||||||
RBAM_013850__    301 CCCAATGGATGGAAAGCTGTTATTGAGATTGTTTTAAACGGCACATTTTT    350

BSNT_02354___    351 TTGCAGCCAAGCAGCGGCAAGGCATTGGATTGACCAGAAGCAGCAGGGTG    400
                     .|||||||||||||||||||||||||||||.||.|||.|||||.||||.|
RBAM_013850__    351 CTGCAGCCAAGCAGCGGCAAGGCATTGGATCGAGCAGGAGCAGAAGGGCG    400

BSNT_02354___    401 TCATTTTAAATATGGCAGCCACGTACGCTTGGGGAGCGGGAGCGGGGGTC    450
                     ||||.|||||||||||.||.||.|||||.|||||||||||||||||.|||
RBAM_013850__    401 TCATCTTAAATATGGCCGCTACATACGCATGGGGAGCGGGAGCGGGTGTC    450

BSNT_02354___    451 GTTCATTCCGCTGCAGCCAAAGCGGGGGTATTGTCATTGACAAGAACGCT    500
                     ||||||||||||||||||||||||||||||||||||.|||||||||||||
RBAM_013850__    451 GTTCATTCCGCTGCAGCCAAAGCGGGGGTATTGTCACTGACAAGAACGCT    500

BSNT_02354___    501 GGCCGTTGAATGGGGGAGCAAATACGGCATTCGTACAAACGCGATAGCCC    550
                     ||||||||||||||||||||||||||||||.||.||||||||||||||||
RBAM_013850__    501 GGCCGTTGAATGGGGGAGCAAATACGGCATCCGCACAAACGCGATAGCCC    550

BSNT_02354___    551 CCGGACCGATTGAACGAACAGGCGGTGCGGAGAAGCTATTTGAATCGGAA    600
                     |.||.|||||||||||.||||||||||||||||||||.||||||||||||
RBAM_013850__    551 CAGGCCCGATTGAACGGACAGGCGGTGCGGAGAAGCTGTTTGAATCGGAA    600

BSNT_02354___    601 AAAGCGATGGCCCGCACGATGAACAGTGTGCCGCTCGGCCGATTGGGCAC    650
                     ||||||.||.|||||||.|||||||||||||||||||||||..|||||||
RBAM_013850__    601 AAAGCGGTGTCCCGCACTATGAACAGTGTGCCGCTCGGCCGGCTGGGCAC    650

BSNT_02354___    651 ACCGGAGGAAATCGCCGCTTTGGCAGCGTTTTTGCTTTCTGATGAAGCAT    700
                     ||||||||||||||||||.|||||||||||||||||||||||||||||.|
RBAM_013850__    651 ACCGGAGGAAATCGCCGCGTTGGCAGCGTTTTTGCTTTCTGATGAAGCGT    700

BSNT_02354___    701 CCTATATAAACGGGGATTGTATCACAATGGACGGGGGGCAATGGCTGAAT    750
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
RBAM_013850__    701 CCTACATAAACGGGGATTGTATCACAATGGACGGGGGGCAATGGCTGAAT    750

BSNT_02354___    751 CCTTATCCGTTTTAA    765
                     |||||||||||||||
RBAM_013850__    751 CCTTATCCGTTTTAA    765


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