Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02333 and RBAM_013700
See
Amino acid alignment /
Visit
BSNT_02333 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:02
# Commandline: needle
# -asequence dna-align/BSNT_02333___splB.1.9828.seq
# -bsequence dna-align/RBAM_013700___spIB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02333___splB-RBAM_013700___spIB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02333___splB-RBAM_013700___spIB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02333___splB
# 2: RBAM_013700___spIB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1033
# Identity: 825/1033 (79.9%)
# Similarity: 825/1033 (79.9%)
# Gaps: 8/1033 ( 0.8%)
# Score: 3245.0
#
#
#=======================================
BSNT_02333___ 1 ATGCAGAACCCATTTGTTCCGCAGCTTGTATATATAGAACCGAGGGCGCT 50
||||.|||.||.|||||.||.||||||||.|||||.||||||||.|||||
RBAM_013700__ 1 ATGCTGAAGCCGTTTGTGCCCCAGCTTGTTTATATTGAACCGAGAGCGCT 50
BSNT_02333___ 51 GGAATATCCGCTAGGCCAAGAATTACAAGAA-AAATTTGAGAATATGGGC 99
.|||||.|||.||||.|||||..| .||||| ||.|||||.||.|||||.
RBAM_013700__ 51 CGAATACCCGTTAGGACAAGAGCT-GAAGAATAAGTTTGAAAACATGGGG 99
BSNT_02333___ 100 ATTGAAATCAGAGAAACAACATCCCACAATCAGGTGCGTAATATTCCTGG 149
.||||.|||||||||||.|||||.||.|||||.||.||.||||||||.||
RBAM_013700__ 100 CTTGAGATCAGAGAAACGACATCACATAATCAAGTCCGGAATATTCCGGG 149
BSNT_02333___ 150 GAAAAATCATCTT-CAGCAATATCGCAATGCGAAATCAACTTTAGTTATC 198
.|||||||| ||| ||||||||.||.||.|||||||||||.||.||.|||
RBAM_013700__ 150 AAAAAATCA-CTTGCAGCAATACCGGAACGCGAAATCAACATTGGTAATC 198
BSNT_02333___ 199 GGTGTCCGGAAAACATTAAAGTTTGATTCATCCAAACCCTCGGCTGAATA 248
||.||||||||||||.|.||.||.|||||.||.||.||.||.||.|||||
RBAM_013700__ 199 GGCGTCCGGAAAACACTGAAATTCGATTCTTCAAAGCCGTCCGCCGAATA 248
BSNT_02333___ 249 TGCCATTCCGTTTGCAACAGGCTGCATGGGGCATTGTCATTACTGCTACC 298
|||||||||.|||||.||.|||||.|||||||||||.||.||.|||||||
RBAM_013700__ 249 TGCCATTCCATTTGCGACGGGCTGTATGGGGCATTGCCACTATTGCTACC 298
BSNT_02333___ 299 TGCAAACAACCATGGGATCAAAGCCGTATATCAGAACTTATGTAAACGTC 348
||||.||.||.|||||.||||||||.||.|||.|.||.|||||.||.||.
RBAM_013700__ 299 TGCAGACGACGATGGGGTCAAAGCCTTACATCCGGACATATGTCAATGTG 348
BSNT_02333___ 349 GAAGAGATTTTGGATCAGGCAGATAAGTATATGAAGGAGCGCGCACCAGA 398
|||||||||.||||||||||.|||.||||||||||.||.||.||.||.||
RBAM_013700__ 349 GAAGAGATTCTGGATCAGGCTGATGAGTATATGAAAGAACGGGCGCCGGA 398
BSNT_02333___ 399 GTTCACAAGGTTCGAAGCATCATGTACGTCAGACATTGTAGGAATTGATC 448
.||.|||||.||.|||||.||.|||||.||.||.||.||.||||||||||
RBAM_013700__ 399 ATTTACAAGATTTGAAGCCTCTTGTACATCTGATATCGTCGGAATTGATC 448
BSNT_02333___ 449 ATCTGACACACACGCTGAAGCGCGCCATTGAACATTTTGGTCAAAGTGAT 498
||||||||||.||..|.||..|.||||||||||||||.||.|||||.||.
RBAM_013700__ 449 ATCTGACACATACATTAAAAAGAGCCATTGAACATTTCGGACAAAGCGAA 498
BSNT_02333___ 499 CTCGGAAAGCTCCGATTTGTAACGAAATTTCATCATGTCGATCACCTATT 548
.|.|||.|||||.||||.||.||.||||||||.||.||||||||..|..|
RBAM_013700__ 499 TTGGGACAGCTCAGATTCGTGACTAAATTTCACCACGTCGATCATTTGCT 548
BSNT_02333___ 549 AGACGCAAAGCATAACGGGAAAACGAGATTCAGATTCAGTATTAATGCCG 598
.||.|||||.||||||||.||.||.||.|||||||||||.||.|||||.|
RBAM_013700__ 549 TGATGCAAAACATAACGGAAAGACTAGGTTCAGATTCAGCATCAATGCGG 598
BSNT_02333___ 599 ACTATGTGATTAAAAACTTTGAGCCGGGAACTTCACCTCTTGATAAGCGG 648
|.|||||.||||||||||||||.|||||||||||.||.||.||.||.|||
RBAM_013700__ 599 ATTATGTCATTAAAAACTTTGAACCGGGAACTTCTCCGCTCGACAAACGG 648
BSNT_02333___ 649 ATAGAGGCGGCAGTAAAAGTTGCAAAAGCAGGCTACCCGCTAGGCTTTAT 698
|||||.||.||.||.|||||.||.|||||.|||||.|||||.||.||.||
RBAM_013700__ 649 ATAGAAGCCGCCGTGAAAGTCGCTAAAGCGGGCTATCCGCTCGGTTTCAT 698
BSNT_02333___ 699 TGTTGCTCCGATTTATATTCATGAAGGCTGGGAAGAAGGATACAGACATC 748
.||.||.||||||||||||||.||.||||||||.|||||.||.|...|.|
RBAM_013700__ 699 CGTGGCGCCGATTTATATTCACGATGGCTGGGAGGAAGGCTATAAGGAAC 748
BSNT_02333___ 749 TGTTTGAAAAGCTTGATGCTGC-TTTGCCGCAGGACGTTAGACATGACAT 797
|||||||.||.||.|||||.|| .|||..| |.||||||.|.||||||||
RBAM_013700__ 749 TGTTTGAGAAACTGGATGCGGCGCTTGATG-AAGACGTTCGGCATGACAT 797
BSNT_02333___ 798 AACGTTTGAATTAATTCAACACCGTTTTACAAAACCGGCCAAACGAGTGA 847
.||.||||||.|.||.||.||||||||||||||||||||||||||.||||
RBAM_013700__ 798 TACATTTGAACTGATCCAGCACCGTTTTACAAAACCGGCCAAACGGGTGA 847
BSNT_02333___ 848 TAGAGAAAAATTATCCGAAGACGAAGCTCGAATTAGATGAAGAAAAGCGC 897
|.|||||.||.||||||||.||.|||||.||..|.|||||||||||||||
RBAM_013700__ 848 TTGAGAAGAACTATCCGAAAACAAAGCTTGAGCTTGATGAAGAAAAGCGC 897
BSNT_02333___ 898 CGTTATAAATGGGGACGCTACGGGATCGGAAAATATATATATCAGAAAGA 947
.|.||.|||||||||||||||||.|||||.||.||||||||.||.||.||
RBAM_013700__ 898 AGATACAAATGGGGACGCTACGGAATCGGCAAGTATATATACCAAAAGGA 947
BSNT_02333___ 948 TGAAGAGCATGCACTT-CGAGAAGCACTTGAATCCTATATTGATACCTTT 996
.|||||.|||| |||| .|.|||.||||.|||||.|||||.||.||||.|
RBAM_013700__ 948 CGAAGAACATG-ACTTAAGGGAAACACTCGAATCTTATATCGAAACCTAT 996
BSNT_02333___ 997 TTCCCTAACGCGAAAATTGAATATTTCACTTAA 1029
||.||.||.||||||||.||||||||.||.|||
RBAM_013700__ 997 TTTCCGAAAGCGAAAATCGAATATTTTACGTAA 1029
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.