Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02332 and RBAM_013690

See Amino acid alignment / Visit BSNT_02332 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:02
# Commandline: needle
#    -asequence dna-align/BSNT_02332___splA.1.9828.seq
#    -bsequence dna-align/RBAM_013690___splA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02332___splA-RBAM_013690___splA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02332___splA-RBAM_013690___splA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02332___splA
# 2: RBAM_013690___splA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 250
# Identity:     172/250 (68.8%)
# Similarity:   172/250 (68.8%)
# Gaps:          20/250 ( 8.0%)
# Score: 591.5
# 
#
#=======================================

BSNT_02332___      1 ATGTCAAACCAATTTAACGCAGGAGATACTGTTTATGTGATCTACAGAAA     50
                     |||.||||...||||...||.||.|||||.||.||||||||.|||.|.||
RBAM_013690__      1 ATGACAAAATCATTTGCAGCGGGGGATACGGTCTATGTGATTTACCGCAA     50

BSNT_02332___     51 TCCGCACGCCGCCAATGTAGCTCACATAAAGGAAGCCGAAATTGTGCACC    100
                     ||||||.|||||||||||.||.||.||.||.||.||.||.||.||.||.|
RBAM_013690__     51 TCCGCATGCCGCCAATGTTGCCCATATTAAAGAGGCGGAGATCGTCCATC    100

BSNT_02332___    101 ATCCATACCATGAAGGCGAGCTTTCCCTGTTTATTTATGAAACCTATCAC    150
                     |.||.||.|||||.||.||.||.||.||||||.|.||.|||||||||||.
RBAM_013690__    101 ACCCGTATCATGAGGGAGAACTGTCTCTGTTTTTATACGAAACCTATCAT    150

BSNT_02332___    151 CCGTTCGCAGAGGACGATGCTGTGTTTGCAAGCTATGAAGAAGCTAAATC    200
                     |||.|.||.||.||.||.||.||.|||.|.|..|||||.|||||..||.|
RBAM_013690__    151 CCGCTGGCCGAAGATGACGCGGTCTTTTCGACATATGAGGAAGCGGAAGC    200

BSNT_02332___    201 GCTTTACAAAGAACTCTTTGA----------TATTGATCCATATGAGTAA    240
                     ||||||||..||.||.|||||          |||     ||| |||    
RBAM_013690__    201 GCTTTACAGCGAGCTTTTTGAAGAAGACCGGTAT-----CAT-TGA----    240


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