Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02330 and RBAM_013670
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:02
# Commandline: needle
# -asequence dna-align/BSNT_02330___ptsH.1.9828.seq
# -bsequence dna-align/RBAM_013670___ptsH.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02330___ptsH-RBAM_013670___ptsH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02330___ptsH-RBAM_013670___ptsH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02330___ptsH
# 2: RBAM_013670___ptsH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 267
# Identity: 246/267 (92.1%)
# Similarity: 246/267 (92.1%)
# Gaps: 0/267 ( 0.0%)
# Score: 1146.0
#
#
#=======================================
BSNT_02330___ 1 ATGGCACAAAAAACATTTAAAGTAACTGCAGATTCTGGAATCCATGCTCG 50
||||||||||||||||||||||||||.||||||||.||||||||.|||||
RBAM_013670__ 1 ATGGCACAAAAAACATTTAAAGTAACAGCAGATTCCGGAATCCACGCTCG 50
BSNT_02330___ 51 TCCTGCGACAGTTCTTGTTCAAACTGCTAGCAAATACGACGCTGACGTTA 100
||||||||||||||||||.||.|||||.|||||||||||.||||||||.|
RBAM_013670__ 51 TCCTGCGACAGTTCTTGTACAGACTGCAAGCAAATACGATGCTGACGTAA 100
BSNT_02330___ 101 ATTTAGAATATAACGGCAAAACAGTTAACCTTAAATCTATTATGGGTGTT 150
|.|||||||||||||||||||||||.||||||||.||.||.|||||.|||
RBAM_013670__ 101 ACTTAGAATATAACGGCAAAACAGTAAACCTTAAGTCAATCATGGGCGTT 150
BSNT_02330___ 151 ATGTCTTTAGGTATCGCTAAAGGCGCTGAGATCACAATCTCTGCTTCCGG 200
||||||.|||||||.||||||||||||||.||||||||.||.|||||.||
RBAM_013670__ 151 ATGTCTCTAGGTATTGCTAAAGGCGCTGAAATCACAATTTCCGCTTCAGG 200
BSNT_02330___ 201 AGCTGACGAAAACGATGCTCTTAACGCTTTAGAAGAAACAATGAAAAGCG 250
.|||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_013670__ 201 CGCTGACGAAAACGATGCTCTTAACGCTTTAGAAGAAACAATGAAAAGCG 250
BSNT_02330___ 251 AAGGACTCGGCGAGTAA 267
|||||||||||||||||
RBAM_013670__ 251 AAGGACTCGGCGAGTAA 267
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