Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02329 and RBAM_013660
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########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:01
# Commandline: needle
# -asequence dna-align/BSNT_02329___ptsG.1.9828.seq
# -bsequence dna-align/RBAM_013660___ptsG.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02329___ptsG-RBAM_013660___ptsG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02329___ptsG-RBAM_013660___ptsG.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02329___ptsG
# 2: RBAM_013660___ptsG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2119
# Identity: 1694/2119 (79.9%)
# Similarity: 1694/2119 (79.9%)
# Gaps: 41/2119 ( 1.9%)
# Score: 6818.5
#
#
#=======================================
BSNT_02329___ 1 ATGTTTAAAGCATTATTCGGCGTTCTTCAAAAAATTGGGCGTGCGCTTAT 50
||||||||||||||||||||||||||.||.|||||.||.|||||.|||||
RBAM_013660__ 1 ATGTTTAAAGCATTATTCGGCGTTCTCCAGAAAATCGGCCGTGCTCTTAT 50
BSNT_02329___ 51 GCTTCCAGTTGCGATCCTTCCGGCTGCGGGGATTTTGCTTGCGATCGGGA 100
||||||.||||||||..|.||||||||||||||.|||||||||.|.||||
RBAM_013660__ 51 GCTTCCGGTTGCGATTTTACCGGCTGCGGGGATCTTGCTTGCGTTAGGGA 100
BSNT_02329___ 101 ATGCGATGCAAAATAAGGACATGATTCAGGTCCTGCATTTCTTGAGCAAT 150
||||.|||||.||.||.||.||||||||.|||.||||.|||||.||||||
RBAM_013660__ 101 ATGCCATGCAGAACAAAGATATGATTCAAGTCATGCACTTCTTAAGCAAT 150
BSNT_02329___ 151 GACAATGTTCAGCTTGTAGCAGGTGTGATGGAAAGCGCTGGGCAGATTGT 200
||.||.|||||||||||.||...|||.|||||||||||.||.||.||.||
RBAM_013660__ 151 GATAACGTTCAGCTTGTGGCGAATGTCATGGAAAGCGCCGGCCAAATCGT 200
BSNT_02329___ 201 TTTCGATAACCTTCCGCTTCTTTTCGCAGTAGGTGTAGCCATCGGGCTTG 250
.||.||.|||||.|||||||||||.||||||||.||.||.|||||.||||
RBAM_013660__ 201 ATTTGACAACCTGCCGCTTCTTTTTGCAGTAGGGGTTGCGATCGGTCTTG 250
BSNT_02329___ 251 CCAACGGTGATGGAGTTGCAGGGATTGCAGCAATTATCGGTTATCTT-GT 299
|||||||.||.||.|||||.||.||.||.||.||||||||.|| ||| ||
RBAM_013660__ 251 CCAACGGAGACGGTGTTGCCGGAATCGCGGCTATTATCGGATA-CTTGGT 299
BSNT_02329___ 300 AATGAATGTATCCATGAGTGCGGTTCTTCTTGCAAACGGAACCATTCCTT 349
.|||||.|||||||||||.||.||.|||.|.||||||||.|..|||||.|
RBAM_013660__ 300 CATGAACGTATCCATGAGCGCCGTGCTTATGGCAAACGGCAGTATTCCGT 349
BSNT_02329___ 350 CGGATTCAGTTGAAAGAGCCAAGTTCTTTACGGAAAACCATCCTGCATAT 399
|.||...|.|||||.|.||.|||||.|||.|||||||||||||.||.|||
RBAM_013660__ 350 CTGACAAAATTGAACGGGCAAAGTTTTTTGCGGAAAACCATCCGGCCTAT 399
BSNT_02329___ 400 GTAAACATGCTTGGTATACCTACCCTGGCGACAGGGGTGTTCGGCGGTAT 449
.|.||||||||.||.|||||.||..|||||||.||.||||||||||||||
RBAM_013660__ 400 ATTAACATGCTGGGGATACCCACTTTGGCGACGGGCGTGTTCGGCGGTAT 449
BSNT_02329___ 450 TATCGTCGGTGTGTTAGCTGCATTATTGTTTAACAGATTTTACACAATTG 499
|||||||||.||..|.||.||.||||||||.||||..|||||.|.|||||
RBAM_013660__ 450 TATCGTCGGGGTTCTGGCCGCGTTATTGTTCAACAAGTTTTATAAAATTG 499
BSNT_02329___ 500 AACTGCCGCAATACCTTGGTTTCTTTGCGGGTAAACGTTTCGTTCCAATT 549
||||.|||||.|||||.||.||||||||||||||.||.|||||.||.|||
RBAM_013660__ 500 AACTTCCGCAGTACCTCGGATTCTTTGCGGGTAAGCGGTTCGTCCCGATT 549
BSNT_02329___ 550 GTTACGTCAATTTCTGCACTGATTCTGGGTCTTATTATGTTAGTGATCTG 599
.|.||.||.|||||.|||.|.|||||.|||||||||||||||||||||||
RBAM_013660__ 550 ATCACATCGATTTCCGCATTAATTCTCGGTCTTATTATGTTAGTGATCTG 599
BSNT_02329___ 600 GCCTCCGATCCAGCATGGATTGAATGCCTTTTCAACAGGATTAGTGGAAG 649
|||||||||||||||.||..|||||.|.||.||.||.||..|.|||||||
RBAM_013660__ 600 GCCTCCGATCCAGCACGGTCTGAATTCTTTCTCCACGGGTCTTGTGGAAG 649
BSNT_02329___ 650 CGAATCCAACCCTTGCTGCATTTATCTTCGGGGTGATTGAACGTTCGCTT 699
|||||||||||.|.||.||.|||||.||||||.|||||||.||.||..|.
RBAM_013660__ 650 CGAATCCAACCTTGGCGGCCTTTATTTTCGGGATGATTGAGCGGTCATTG 699
BSNT_02329___ 700 ATCCCATTCGGATTGCACCACATTTTCTATTCGCCGTTCTGGTATGAATT 749
||.||.|||||..|.||.|||||||||||.||||||||||||||||||||
RBAM_013660__ 700 ATTCCGTTCGGTCTTCATCACATTTTCTACTCGCCGTTCTGGTATGAATT 749
BSNT_02329___ 750 CTTCAGCTATAAGAG-TGCAGCAGGAGAAATCATCCGCGGGGATCAGCGT 798
.||||||||||| || |||.||.|||||.|||||||||||.||||||||.
RBAM_013660__ 750 TTTCAGCTATAA-AGATGCGGCCGGAGACATCATCCGCGGAGATCAGCGG 798
BSNT_02329___ 799 ATCTTTATGGCGCAGATTAAAGACGGCGTACAGTTAACGGCAGGTACGTT 848
||.||.|||||.|||||.|||||||||||||||.|.|||||.||.||.||
RBAM_013660__ 799 ATTTTCATGGCTCAGATCAAAGACGGCGTACAGCTGACGGCGGGAACATT 848
BSNT_02329___ 849 TATGACAGGTAAATATCCATTTATGATGTTCGGTCTGCCTGCTGCGGCGC 898
||||||.||.||||||||.|||||||||||||||||.||.||.||.||||
RBAM_013660__ 849 TATGACGGGGAAATATCCGTTTATGATGTTCGGTCTTCCGGCGGCAGCGC 898
BSNT_02329___ 899 TTGCCATTTATCATGAAGCAAAACCGCAAAACAAAAAACTCGTTGCAGGT 948
||||.||.|||||||||||.||.||..||||.||||||||.||.||.||.
RBAM_013660__ 899 TTGCAATCTATCATGAAGCGAAGCCTGAAAAGAAAAAACTTGTAGCCGGA 948
BSNT_02329___ 949 ATTATGGGTTCAGCGGCCTTGACATCCTTCTTAACGGGGATCACAGAGCC 998
||.||||||||.||.||..|||||...|||||||||||.||.||.|||||
RBAM_013660__ 949 ATCATGGGTTCTGCCGCTCTGACAAGTTTCTTAACGGGAATTACCGAGCC 998
BSNT_02329___ 999 ATTGGAATTTTCTTTCTTATTCGTTGCTCCAGTCCTGTTTGCGATTCACT 1048
..|.|||||.||.|||||.||.||.|||||..||||||||||||||||||
RBAM_013660__ 999 GCTTGAATTCTCATTCTTGTTTGTGGCTCCTATCCTGTTTGCGATTCACT 1048
BSNT_02329___ 1049 GTTTGTTTGCGGGACTTTCATTCATGGTCATGCAGCTGTTGAATGTTAAG 1098
|..|.||.|||||||||||.||.|||||.|||||||||.||.||||.||.
RBAM_013660__ 1049 GCGTATTCGCGGGACTTTCCTTTATGGTTATGCAGCTGCTGCATGTAAAA 1098
BSNT_02329___ 1099 ATTGGTATGACATTCTCCGGCGGTTTAATTGACTACTTCCTATTCGGTAT 1148
||.||||||||.|||||.||||||.|.||||||||||||||.|||||.||
RBAM_013660__ 1099 ATCGGTATGACCTTCTCAGGCGGTCTGATTGACTACTTCCTGTTCGGAAT 1148
BSNT_02329___ 1149 TTTACCGAACCGGACGGCATGGTGGCTTGTCATCCCTGTCGGCTTAGGGT 1198
|.|.||.|||||||||||.||||||||||||||.||.|||||||||||.|
RBAM_013660__ 1149 TCTGCCTAACCGGACGGCTTGGTGGCTTGTCATTCCGGTCGGCTTAGGAT 1198
BSNT_02329___ 1199 TAGCGGTCATTTACTACTTCGGATTCCGATTTGCCATCCGCAAATTTAAT 1248
||||.|||||||||||||||||.|||||.|||||.|||.|.||.||.|||
RBAM_013660__ 1199 TAGCCGTCATTTACTACTTCGGTTTCCGGTTTGCGATCAGAAAGTTCAAT 1248
BSNT_02329___ 1249 CTGAAAACACCTGGACG---CGAGGATGCTGCGGAAGAAACAGC-AGCAC 1294
||||||||.||.||.|| .||.||.||||||||.|||...|| .||.|
RBAM_013660__ 1249 CTGAAAACGCCGGGCCGTGAAGAAGAGGCTGCGGATGAAGGTGCGGGCGC 1298
BSNT_02329___ 1295 CTGGGAAAACAGGTGAAGCAGGGGATCTTCCTTATGAGATTCTGCAGGCA 1344
|| ||||.|||||.||.||.|||||||||||.||.|||||||||
RBAM_013660__ 1299 CT-------CAGGCGAAGCCGGCGACCTTCCTTATGAAATCCTGCAGGCA 1341
BSNT_02329___ 1345 ATGGGTGACCAGGAAAACATCAAACACCTTGATGCTTGTATCACTCGTCT 1394
||||||||.|||||||||||.||.||||||||.|||||||||||..|.||
RBAM_013660__ 1342 ATGGGTGATCAGGAAAACATTAAGCACCTTGACGCTTGTATCACGAGACT 1391
BSNT_02329___ 1395 GCGTGTGACTGTAAACGATCAGAAAAAGGTTGATAAAGACCGTCTGAAAC 1444
.||.||.||.||.|||||.|||||.||.||.|||||.|.||||||.||||
RBAM_013660__ 1392 TCGCGTTACGGTCAACGACCAGAAGAAAGTGGATAAGGCCCGTCTCAAAC 1441
BSNT_02329___ 1445 AGCTTGGCGCTTCCGGAGTGCTGGAAGTCGGCAACAACATTCAGGCTATT 1494
||||||||||.||.||.||.||.||||||||.|||||.||||||||.|||
RBAM_013660__ 1442 AGCTTGGCGCCTCAGGCGTTCTTGAAGTCGGAAACAATATTCAGGCCATT 1491
BSNT_02329___ 1495 TTCGGACCGCGTTCTGACGGGTTAAAAACACAAATGCAAGACATTATTGC 1544
|||||.||||||||||||||.|||||||||||.|||||.||.|||||.||
RBAM_013660__ 1492 TTCGGCCCGCGTTCTGACGGTTTAAAAACACAGATGCAGGATATTATCGC 1541
BSNT_02329___ 1545 GGGACGCAAGCCTAGACCTGAACCGAAAACATCTGCTCAAGAGGAAGTAG 1594
.|||||||.|||..|.||||||||||||..|||.||.|||||.|||||..
RBAM_013660__ 1542 CGGACGCACGCCGCGCCCTGAACCGAAAGTATCCGCGCAAGAAGAAGTCA 1591
BSNT_02329___ 1595 GACAGCAGGTTGAGGAAGTGATTGCAGAACCGCTGCAAAATGAAATCGGA 1644
|.|||||||||||.||.||.||.|||||.|||||.|.|||.||....||.
RBAM_013660__ 1592 GCCAGCAGGTTGAAGAGGTTATCGCAGATCCGCTCCGAAACGAGCAGGGT 1641
BSNT_02329___ 1645 GAGGAAGTTTTCGTTTCTCCGATTACCGGGGAAATTCACCCGATTACGGA 1694
||.|||||.||||.|||||||||.|||||.|||||.||.||||||||.||
RBAM_013660__ 1642 GAAGAAGTGTTCGCTTCTCCGATCACCGGCGAAATCCATCCGATTACCGA 1691
BSNT_02329___ 1695 TGTTCCTGACCAAGTCTTCTCAGGAAAAATGATGGGTGACGGTTTTGCGA 1744
|||.||||||||.||.||||||||||||||||||||.|||||||||||||
RBAM_013660__ 1692 TGTGCCTGACCAGGTGTTCTCAGGAAAAATGATGGGCGACGGTTTTGCGA 1741
BSNT_02329___ 1745 TTCTCCCTTCTGAAGGAATTGTCGTATCACCGGTTCGCGGAAAAATTCTA 1794
||||.|||...||||||||.||||||||.||.||.|||||||||.|.||.
RBAM_013660__ 1742 TTCTTCCTGAAGAAGGAATCGTCGTATCGCCTGTCCGCGGAAAAGTGCTG 1791
BSNT_02329___ 1795 AATGTGTTCCCGACGAAACATGCGATCGGCCTGCAATCCGACGGCGGAAG 1844
|||||.||||||||.|||||||||||||||||.||.||.|||||||||||
RBAM_013660__ 1792 AATGTTTTCCCGACAAAACATGCGATCGGCCTTCAGTCTGACGGCGGAAG 1841
BSNT_02329___ 1845 AGAAATTTTAATCCACTTTGGTATTGATACCGTCAGCCTGAAGGGCGAAG 1894
|||.||..|.||.||.||.||.||.||.||.|||||||||||.|||||||
RBAM_013660__ 1842 AGAGATCCTCATTCATTTCGGAATCGACACAGTCAGCCTGAAAGGCGAAG 1891
BSNT_02329___ 1895 GATTTACGTCTTTCGTATCAGAAGGAGACCGCGTTGAGCCTGGACAAAAA 1944
||||.||.|||||.||.||.||.||.|||||.|||||.||.||||||||.
RBAM_013660__ 1892 GATTCACTTCTTTTGTTTCTGAGGGTGACCGGGTTGAACCGGGACAAAAG 1941
BSNT_02329___ 1945 CTTCTTGAAGTTGATCTGGATAAAGTCAAACCGAATGTACCATCTCTCAT 1994
||.||||||||||||||.||....||.|||||..||||.||.||..|.||
RBAM_013660__ 1942 CTGCTTGAAGTTGATCTTGAAGCGGTTAAACCTCATGTTCCTTCATTAAT 1991
BSNT_02329___ 1995 GACACCGATTGTATTTACAAACCTTGCTGAAGGAGAAACAGTCAGTATT- 2043
||||||||||||.||||||||.|||||.||.||.|||.| .|||
RBAM_013660__ 1992 GACACCGATTGTCTTTACAAATCTTGCCGAGGGTGAAGC------GATTT 2035
BSNT_02329___ 2044 ------------AAAGCAAGCGGTTCAGTCAACAGAGAACAAGAAGATAT 2081
|| |||.|.||.||..|.||||||.|||||||
RBAM_013660__ 2036 CCCTTTCGGCCGAA-------GGTACCGTAAAACGGGAACAAAAAGATAT 2078
BSNT_02329___ 2082 TGTGAAGATTGAAAAATAA 2100
||||||.||.|.|||||||
RBAM_013660__ 2079 TGTGAAAATCGGAAAATAA 2097
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