Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02314 and RBAM_013590

See Amino acid alignment / Visit BSNT_02314 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:00
# Commandline: needle
#    -asequence dna-align/BSNT_02314___ykvT.1.9828.seq
#    -bsequence dna-align/RBAM_013590___ykvT.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02314___ykvT-RBAM_013590___ykvT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02314___ykvT-RBAM_013590___ykvT.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02314___ykvT
# 2: RBAM_013590___ykvT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 660
# Identity:     442/660 (67.0%)
# Similarity:   442/660 (67.0%)
# Gaps:          69/660 (10.5%)
# Score: 1437.0
# 
#
#=======================================

BSNT_02314___      1 ATGACAACGAAATTCACTGCTCTGGCTGTTTTTCTTCTTTGTTTCATGCC     50
                     |||||.||.|||||..||||..||||.||.|||.||||.|||||.|||||
RBAM_013590__      1 ATGACGACAAAATTTGCTGCCTTGGCAGTCTTTTTTCTATGTTTTATGCC     50

BSNT_02314___     51 TGCAGCCAAAATTGAGCATACACAAGC----TTCACTACTGAGCGCAAAG     96
                     ||||.|.||||||||.||||||.||||    ||.|||..|    ||.|||
RBAM_013590__     51 TGCATCAAAAATTGAACATACAGAAGCTCTGTTTACTTTT----GCGAAG     96

BSNT_02314___     97 AAGACAAAACATGAA-GAAGCGAAATGGCTTACACATATAGATCGAAATA    145
                     |||.||||.||.||| ..|||..|.||| ||.|..||.||.||..|||  
RBAM_013590__     97 AAGCCAAAGCAAGAACCCAGCACACTGG-TTGCTGATTTAAATAAAAA--    143

BSNT_02314___    146 CGAATGAATCT---TTC-----CCTTCACTGTCTGCTGATAAGGA-----    182
                           ||.||   |||     |.||||....|.|.|.|||||.|     
RBAM_013590__    144 ------AAGCTCGGTTCCGAAGCTTTCAAAAACGGATCATAAGCATTCTA    187

BSNT_02314___    183 --CAAGAAAATAACACCGATTAAGCTATCAGCACACACTGAAAAGAAAGA    230
                       ||          ||||||.|||||.|||.|.|||     .||||.| |
RBAM_013590__    188 TCCA----------ACCGATAAAGCTGTCATCTCAC-----CAAGAGA-A    221

BSNT_02314___    231 GAAAGATAAACCGGACAAAACAAATGATGA------GAAAGAAACATATA    274
                     |||||..||||||||..|.||...|.||.|      ||||.||||.|||.
RBAM_013590__    222 GAAAGCAAAACCGGAGGAGACGGCTTATCAGCCGCCGAAAAAAACGTATT    271

BSNT_02314___    275 CACAGTCTGAAAAAGAGTTGCTGTCCCGTCTCGTTCACGCAGAGGCCAAA    324
                     |.|...||||.|.|.|..|.|||||.||.||||||||||||||.||.|||
RBAM_013590__    272 CCCGCGCTGACAGACAACTTCTGTCACGGCTCGTTCACGCAGAAGCGAAA    321

BSNT_02314___    325 GGAGAATCATATAAAGGCAAGGTCGCTGTAGCAAGCGTTGTACTGAACAG    374
                     ||.|||||.||||||||.|||||.||.|||||.|||||.||.||||||.|
RBAM_013590__    322 GGTGAATCTTATAAAGGGAAGGTTGCGGTAGCCAGCGTAGTGCTGAACCG    371

BSNT_02314___    375 GACGGAGAAAAAAGGTTTTCCTGATACGATAAGAGGAGTTATTTATCAGA    424
                     .||.||.|||||.||.||.||.|||||.||..|.||.||.||.|||||.|
RBAM_013590__    372 CACTGAAAAAAACGGCTTCCCGGATACCATTCGGGGCGTGATCTATCAAA    421

BSNT_02314___    425 AAAACGCCTTTGAACCGGTCGCAAACGGGAGCATTAACCAAAAGCCTGAT    474
                     ..||.||.|||||||||||.||||||||.||||||||.||||||||.|||
RBAM_013590__    422 GGAATGCATTTGAACCGGTAGCAAACGGAAGCATTAATCAAAAGCCGGAT    471

BSNT_02314___    475 AAAGAATCGATTGAAGCTGCCGAAGAAGCGC-TGTCCTCAAAAAAT----    519
                     ||.||.||.||.|..||.||..|.||.|||| ||.||       ||    
RBAM_013590__    472 AAGGATTCCATCGCCGCCGCAAATGAGGCGCTTGACC-------ATCCGG    514

BSNT_02314___    520 --AGAGAAACAGATGCCATATTCTTTTATAATCCGAAAACAGCGTCAGAT    567
                       ||||||||..|.||..|.||.||.||.|||||||||||.||.||.||.
RBAM_013590__    515 GCAGAGAAACGAACGCGTTGTTTTTCTACAATCCGAAAACGGCATCTGAC    564

BSNT_02314___    568 AATTGGATTCGTTCAAGAAAAATCGTAGAAAAAATCGGCAGACACGTTTT    617
                     .|.|||||.|||||..|||||||..|.|||...||||||||||||||.||
RBAM_013590__    565 CACTGGATCCGTTCCCGAAAAATTATCGAACGGATCGGCAGACACGTATT    614

BSNT_02314___    618 TGCCGTCTAA    627
                     |||..|.|||
RBAM_013590__    615 TGCGATGTAA    624


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