Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02314 and RBAM_013590
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:00
# Commandline: needle
# -asequence dna-align/BSNT_02314___ykvT.1.9828.seq
# -bsequence dna-align/RBAM_013590___ykvT.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02314___ykvT-RBAM_013590___ykvT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02314___ykvT-RBAM_013590___ykvT.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02314___ykvT
# 2: RBAM_013590___ykvT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 660
# Identity: 442/660 (67.0%)
# Similarity: 442/660 (67.0%)
# Gaps: 69/660 (10.5%)
# Score: 1437.0
#
#
#=======================================
BSNT_02314___ 1 ATGACAACGAAATTCACTGCTCTGGCTGTTTTTCTTCTTTGTTTCATGCC 50
|||||.||.|||||..||||..||||.||.|||.||||.|||||.|||||
RBAM_013590__ 1 ATGACGACAAAATTTGCTGCCTTGGCAGTCTTTTTTCTATGTTTTATGCC 50
BSNT_02314___ 51 TGCAGCCAAAATTGAGCATACACAAGC----TTCACTACTGAGCGCAAAG 96
||||.|.||||||||.||||||.|||| ||.|||..| ||.|||
RBAM_013590__ 51 TGCATCAAAAATTGAACATACAGAAGCTCTGTTTACTTTT----GCGAAG 96
BSNT_02314___ 97 AAGACAAAACATGAA-GAAGCGAAATGGCTTACACATATAGATCGAAATA 145
|||.||||.||.||| ..|||..|.||| ||.|..||.||.||..|||
RBAM_013590__ 97 AAGCCAAAGCAAGAACCCAGCACACTGG-TTGCTGATTTAAATAAAAA-- 143
BSNT_02314___ 146 CGAATGAATCT---TTC-----CCTTCACTGTCTGCTGATAAGGA----- 182
||.|| ||| |.||||....|.|.|.|||||.|
RBAM_013590__ 144 ------AAGCTCGGTTCCGAAGCTTTCAAAAACGGATCATAAGCATTCTA 187
BSNT_02314___ 183 --CAAGAAAATAACACCGATTAAGCTATCAGCACACACTGAAAAGAAAGA 230
|| ||||||.|||||.|||.|.||| .||||.| |
RBAM_013590__ 188 TCCA----------ACCGATAAAGCTGTCATCTCAC-----CAAGAGA-A 221
BSNT_02314___ 231 GAAAGATAAACCGGACAAAACAAATGATGA------GAAAGAAACATATA 274
|||||..||||||||..|.||...|.||.| ||||.||||.|||.
RBAM_013590__ 222 GAAAGCAAAACCGGAGGAGACGGCTTATCAGCCGCCGAAAAAAACGTATT 271
BSNT_02314___ 275 CACAGTCTGAAAAAGAGTTGCTGTCCCGTCTCGTTCACGCAGAGGCCAAA 324
|.|...||||.|.|.|..|.|||||.||.||||||||||||||.||.|||
RBAM_013590__ 272 CCCGCGCTGACAGACAACTTCTGTCACGGCTCGTTCACGCAGAAGCGAAA 321
BSNT_02314___ 325 GGAGAATCATATAAAGGCAAGGTCGCTGTAGCAAGCGTTGTACTGAACAG 374
||.|||||.||||||||.|||||.||.|||||.|||||.||.||||||.|
RBAM_013590__ 322 GGTGAATCTTATAAAGGGAAGGTTGCGGTAGCCAGCGTAGTGCTGAACCG 371
BSNT_02314___ 375 GACGGAGAAAAAAGGTTTTCCTGATACGATAAGAGGAGTTATTTATCAGA 424
.||.||.|||||.||.||.||.|||||.||..|.||.||.||.|||||.|
RBAM_013590__ 372 CACTGAAAAAAACGGCTTCCCGGATACCATTCGGGGCGTGATCTATCAAA 421
BSNT_02314___ 425 AAAACGCCTTTGAACCGGTCGCAAACGGGAGCATTAACCAAAAGCCTGAT 474
..||.||.|||||||||||.||||||||.||||||||.||||||||.|||
RBAM_013590__ 422 GGAATGCATTTGAACCGGTAGCAAACGGAAGCATTAATCAAAAGCCGGAT 471
BSNT_02314___ 475 AAAGAATCGATTGAAGCTGCCGAAGAAGCGC-TGTCCTCAAAAAAT---- 519
||.||.||.||.|..||.||..|.||.|||| ||.|| ||
RBAM_013590__ 472 AAGGATTCCATCGCCGCCGCAAATGAGGCGCTTGACC-------ATCCGG 514
BSNT_02314___ 520 --AGAGAAACAGATGCCATATTCTTTTATAATCCGAAAACAGCGTCAGAT 567
||||||||..|.||..|.||.||.||.|||||||||||.||.||.||.
RBAM_013590__ 515 GCAGAGAAACGAACGCGTTGTTTTTCTACAATCCGAAAACGGCATCTGAC 564
BSNT_02314___ 568 AATTGGATTCGTTCAAGAAAAATCGTAGAAAAAATCGGCAGACACGTTTT 617
.|.|||||.|||||..|||||||..|.|||...||||||||||||||.||
RBAM_013590__ 565 CACTGGATCCGTTCCCGAAAAATTATCGAACGGATCGGCAGACACGTATT 614
BSNT_02314___ 618 TGCCGTCTAA 627
|||..|.|||
RBAM_013590__ 615 TGCGATGTAA 624
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