Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02290 and RBAM_013400

See Amino acid alignment / Visit BSNT_02290 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:59
# Commandline: needle
#    -asequence dna-align/BSNT_02290___ykrZ.1.9828.seq
#    -bsequence dna-align/RBAM_013400___mtnD.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02290___ykrZ-RBAM_013400___mtnD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02290___ykrZ-RBAM_013400___mtnD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02290___ykrZ
# 2: RBAM_013400___mtnD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 548
# Identity:     406/548 (74.1%)
# Similarity:   406/548 (74.1%)
# Gaps:          22/548 ( 4.0%)
# Score: 1484.0
# 
#
#=======================================

BSNT_02290___      1 ATGGCTACAATTCGAATTCATGATGAGGCAAATACAACGATTGAAAATCA     50
                     |||||.||.||..||||||||||.||...||||||....||||||.||||
RBAM_013400__      1 ATGGCGACCATCAGAATTCATGACGAAAAAAATACGCTCATTGAACATCA     50

BSNT_02290___     51 AGAGGAAGTGGCAAGCTTTCTGGACAGTCAAGAGGTTATTTATGAGCAAT    100
                     .||.|||||.||..||||..|.|||...||||||||.||.||||||||.|
RBAM_013400__     51 GGAAGAAGTAGCGCGCTTCTTAGACGAACAAGAGGTGATCTATGAGCAGT    100

BSNT_02290___    101 GGGATATCATG--AAGCTTCCGGAACATCTCTCAGAGAAATATGACCTGA    148
                     ||.|.||  ||  ||.||||||....|.||.||.||.|||||.|||||.|
RBAM_013400__    101 GGAACAT--TGAAAAACTTCCGTCTGAGCTTTCGGAAAAATACGACCTAA    148

BSNT_02290___    149 CAGAAGAAGAAAAACAGCAAATTCT-----TGATACCTTCGAAACTGAAA    193
                     |.|||||.||||||.|.|..|||||     ||     ||.||.||.||.|
RBAM_013400__    149 CCGAAGATGAAAAAGAACGGATTCTCGCGGTG-----TTTGACACGGAGA    193

BSNT_02290___    194 TTAAAGATATCTCAACCCGCCGCGGCTATAAAGCACAGGATGTTATTTCA    243
                     ||.|.||.||.|||.||||.|||||.|||.|..|.||||||||.|||||.
RBAM_013400__    194 TTCAGGACATTTCAGCCCGGCGCGGATATCAGTCTCAGGATGTCATTTCT    243

BSNT_02290___    244 TTGTCAGACAGCAATCCGAAACTTGATGAACTGCTTGAAAACTTTAAAAG    293
                     ||.|||||||.||..|||||.|||||||||.|..|..|||||||..||||
RBAM_013400__    244 TTATCAGACACCACGCCGAATCTTGATGAATTATTAAAAAACTTCCAAAG    293

BSNT_02290___    294 AGAGCATCACCATACAGACGATGAGGTTCGTTTTATTGTAAGCGGACACG    343
                     |||.||||||||.||.||.|||||.||.||.|||||.||.||||||||||
RBAM_013400__    294 AGAACATCACCACACGGATGATGAAGTCCGCTTTATCGTCAGCGGACACG    343

BSNT_02290___    344 GTATTTTTGTCATTCAAGGCAAGGACGGCACGTTTTTTGATGTCCGTTTA    393
                     |.||.||.||||||||||||||.||||||||.|||||.||.|||||||||
RBAM_013400__    344 GCATCTTCGTCATTCAAGGCAAAGACGGCACATTTTTCGACGTCCGTTTA    393

BSNT_02290___    394 AACCCTGGAGATTTAATCTCCGTGCCTGAGAATATCCGCCATTACTTCAC    443
                     ||.||.||||||||.||.||.||.||.|||||.||||||||.|||||.||
RBAM_013400__    394 AATCCGGGAGATTTGATTTCAGTTCCGGAGAACATCCGCCACTACTTTAC    443

BSNT_02290___    444 GCTTCAGGAGGACCGCAAAGTTGTCGCGGTGAGAATTTTTGTCACAACTG    493
                     |||||||||.||||||...||.|||||..|..||||.||.||.||.||||
RBAM_013400__    444 GCTTCAGGAAGACCGCCGGGTCGTCGCAATCCGAATCTTCGTGACGACTG    493

BSNT_02290___    494 AAGGCTGGGTTCCGATTTATGAAAAAGACAGCGTGAATCAATAA----    537
                     |.||||||||.||||||||.|||||.||.||.|||   ||| ||    
RBAM_013400__    494 AGGGCTGGGTGCCGATTTACGAAAATGAAAGTGTG---CAA-AACTGA    537


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