Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02286 and RBAM_013360
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:58
# Commandline: needle
# -asequence dna-align/BSNT_02286___ykrV.1.9828.seq
# -bsequence dna-align/RBAM_013360___mtnE.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02286___ykrV-RBAM_013360___mtnE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02286___ykrV-RBAM_013360___mtnE.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02286___ykrV
# 2: RBAM_013360___mtnE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1222
# Identity: 926/1222 (75.8%)
# Similarity: 926/1222 (75.8%)
# Gaps: 50/1222 ( 4.1%)
# Score: 3402.5
#
#
#=======================================
BSNT_02286___ 1 ATGAAATTTGAACAGTCTC--ATGTATTGAAGGAATTGCCTAAACAATTC 48
|||||.||||| |.|||| |||||.|.||..|..||||..|||||||.
RBAM_013360__ 1 ATGAACTTTGA--AATCTCAGATGTACTCAAACAGCTGCCGGAACAATTT 48
BSNT_02286___ 49 TTCGCTTCTCTGGTGCAGAAAGTGAACCGAAAGCTCGCAGAAGGACA-TG 97
|||||.||..|||||||.||||||||.|.||||||...|||||| || .|
RBAM_013360__ 49 TTCGCATCATTGGTGCAAAAAGTGAATCAAAAGCTGAAAGAAGG-CAGAG 97
BSNT_02286___ 98 ACGTTATCAATCTAGGACAGGGAAATCCAGATCAGCCGACTCCTGAACAT 147
||||.||||||.||||.||||||||.||.|||||||||||.|||.|.|||
RBAM_013360__ 98 ACGTCATCAATTTAGGGCAGGGAAACCCTGATCAGCCGACGCCTCAGCAT 147
BSNT_02286___ 148 ATTGTTGAGGAGATGAAACGAGCTGTTGCTGATCCTGAGAATCATAAATA 197
||.|||||.||.|||||.||.||.||.|.....||.||.|||||||||||
RBAM_013360__ 148 ATCGTTGAAGAAATGAAGCGCGCCGTCGAAAGGCCGGAAAATCATAAATA 197
BSNT_02286___ 198 TTCTTCTTTTCGCGGCTCATACCGTCTGAAGTCAGCGGCTGCTGCATTTT 247
.||.||.||.||.|||.|.|||.|..|.||...|||.||.||||||||||
RBAM_013360__ 198 CTCATCATTCCGGGGCGCTTACAGCTTCAAAAAAGCAGCCGCTGCATTTT 247
BSNT_02286___ 248 ACAAAAGAGAATACGGCATTGAT----CTGGATCCGGAAACCGAAGTCGC 293
|..||||.||.||||| |.| ||.|||||||||||.||||||||
RBAM_013360__ 248 ATGAAAGGGAGTACGG----GGTCACGCTTGATCCGGAAACGGAAGTCGC 293
BSNT_02286___ 294 TGTATTATTCGGCGGAAAAGCGGGTCTAGTCGAGCTCCCGCAATG-CTTG 342
.||..|.|||||.||.||.|||||.||.||.|||||.|||||||| |||
RBAM_013360__ 294 CGTGCTGTTCGGAGGCAAGGCGGGACTTGTTGAGCTTCCGCAATGTCTT- 342
BSNT_02286___ 343 TTGAATCCCGGTGATACGATTTTAGTTCCCGATCCGGGTTATCCTGATTA 392
||.||.||.||.|||||.|||.|.||.||.|||||.||.|||||||||||
RBAM_013360__ 343 TTAAACCCGGGAGATACCATTCTGGTGCCTGATCCCGGATATCCTGATTA 392
BSNT_02286___ 393 CTGGTCGGGTGTCACACTTGCAAAAGCAAAGATGGAAATGATGCCGCT-- 440
||||||.||.|||.|.|||||.|||||.||.|||||||||||||||||
RBAM_013360__ 393 CTGGTCAGGCGTCGCCCTTGCGAAAGCGAAAATGGAAATGATGCCGCTGA 442
BSNT_02286___ 441 CGTAAAGGACAGGGCGTTTCTCCCTGATTACAGCAGCATAACCGCTGAAG 490
||.|| ||.||.|.||||||||||||||| ||||.|||...|||||
RBAM_013360__ 443 CGGAA--GAAAGAGGGTTTCTCCCTGATTA---CAGCGTAATTCCTGAA- 486
BSNT_02286___ 491 TAAG----GGAAC-AGGCGAAATTGATGTATTTGAATTATCCGAATAATC 535
||| |||.| |||||||..||.|||||.|.||||||||||||||||
RBAM_013360__ 487 -AAGGTGCGGAGCGAGGCGAAGCTGCTGTATCTCAATTATCCGAATAATC 535
BSNT_02286___ 536 CGACTGGAGCTGTTGCTACTTCCGAGTTCTTTGAAGATACCGTGCGTTTT 585
||||.||.|||||.||.||....|.|||.||.||.||.||.||..|||||
RBAM_013360__ 536 CGACCGGCGCTGTGGCGACAGAGGCGTTTTTCGAGGAGACGGTCGGTTTT 585
BSNT_02286___ 586 GCGGCTGAAAACGGAATCTGCGTCGTTCACGATTTTGCTTACGGCGCTGT 635
||||...|||||||.||.||.||||||||.|||||.||.|||||.||.||
RBAM_013360__ 586 GCGGAGCAAAACGGCATTTGTGTCGTTCATGATTTCGCGTACGGAGCCGT 635
BSNT_02286___ 636 AGGATTTGACGGCTGC--AAGCCTTTAAGCTTTTTGCAGACTGAAGGTGC 683
.||.|||||||| || ||.||..|.||||||||||||||.|||||.||
RBAM_013360__ 636 CGGTTTTGACGG--GCATAAACCGCTGAGCTTTTTGCAGACCGAAGGCGC 683
BSNT_02286___ 684 GAAGGATATCGGAATTGAAATTTACACGCTGTCAAAAACGTATAATATGG 733
.||.||.|..|||||.|||||.||.||..||||.||||||||||||||||
RBAM_013360__ 684 AAAAGAGACGGGAATCGAAATCTATACCTTGTCCAAAACGTATAATATGG 733
BSNT_02286___ 734 CAGGATGGCGGGTTGGCTTTGCCGTCGGAAACGCTTCGGTCATTGAAGCG 783
|.||.||||||||.||.||||||||||||||||||||.|||||.||||||
RBAM_013360__ 734 CGGGCTGGCGGGTCGGATTTGCCGTCGGAAACGCTTCTGTCATCGAAGCG 783
BSNT_02286___ 784 ATCAATCTTTATCAAGACCATATGTTTGTCAGTCT-TTTCAGAGCGACTC 832
|||||.||||||||.||.||||||||||||||.|| |||| ..|||.|.|
RBAM_013360__ 784 ATCAACCTTTATCAGGATCATATGTTTGTCAGCCTGTTTC-CCGCGGCGC 832
BSNT_02286___ 833 AGGAGGCTGCAGCAGAGGCACTGTTAGCCGATCAGACGTGTGTGGCAGAG 882
||.||||.||.||||..|||||.|||||.||||||.|.||.||.||.|.|
RBAM_013360__ 833 AGCAGGCGGCGGCAGCCGCACTTTTAGCGGATCAGGCATGCGTCGCGGCG 882
BSNT_02286___ 883 CAAAATGCCAGGTATGAGAGCAGGAGA---AACGCTTGGATCACGGCATG 929
|||||||.|||.||||| |.| |||| ||.||.|||||.|..||.||
RBAM_013360__ 883 CAAAATGACAGATATGA-ATC--GAGACGCAATGCATGGATTAAAGCCTG 929
BSNT_02286___ 930 CCGGGAAATCGGCTGGGATGTAACAGCTCCCGCAGGTTCTTTTTTTGCAT 979
|||..|.||||||||||||||.||.|||||.||.||.||.||||||||||
RBAM_013360__ 930 CCGCAATATCGGCTGGGATGTGACGGCTCCGGCGGGCTCCTTTTTTGCAT 979
BSNT_02286___ 980 GGCTGCCTGTGCCTGAAGGCTATACTTCTGAGCAGTTCTCAGATCTTTTG 1029
||||.|||||||||||.||.|||||.||..||..|||.||||||||..||
RBAM_013360__ 980 GGCTCCCTGTGCCTGACGGTTATACGTCACAGTCGTTTTCAGATCTGCTG 1029
BSNT_02286___ 1030 CTGGAAAAAGCGAATGTGGCAGTTGCGGCTGGAAACGGCTTCGGTGAATA 1079
||.||.||||||.||||.||.||.||.||.||||||||.|||||..|||.
RBAM_013360__ 1030 CTCGAGAAAGCGGATGTCGCGGTCGCTGCCGGAAACGGGTTCGGAAAATG 1079
BSNT_02286___ 1080 TGGCGAGGGCTACGTCAGAGTCGGACTTTTAACAAGTGAAGAAAGACTTA 1129
.||.||.|||||..|.||||||||.|||.|.|||||||||.|||||||||
RBAM_013360__ 1080 GGGGGAAGGCTATATAAGAGTCGGTCTTCTGACAAGTGAACAAAGACTTA 1129
BSNT_02286___ 1130 AGGAAGCCGCTTATCGAATTGGCAAACTGAACCTGTTTACCCAAAAAAGC 1179
..|||||.||..|.||.||.||.||||||||.||.||.||||.|||||||
RBAM_013360__ 1130 CAGAAGCTGCGGAACGGATCGGGAAACTGAATCTTTTCACCCGAAAAAGC 1179
BSNT_02286___ 1180 ATTGACA----AGACCTTATAA 1197
||||||| ||| ||||
RBAM_013360__ 1180 ATTGACATATCAGA----ATAA 1197
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