Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02283 and RBAM_013340
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:58
# Commandline: needle
# -asequence dna-align/BSNT_02283___mtnK.1.9828.seq
# -bsequence dna-align/RBAM_013340___mtnK.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02283___mtnK-RBAM_013340___mtnK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02283___mtnK-RBAM_013340___mtnK.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02283___mtnK
# 2: RBAM_013340___mtnK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1240
# Identity: 904/1240 (72.9%)
# Similarity: 904/1240 (72.9%)
# Gaps: 98/1240 ( 7.9%)
# Score: 3188.0
#
#
#=======================================
BSNT_02283___ 1 ATGATGGGAGTCACAAAAACA--CCTTTATACGAAACGTTAAATGAAAGC 48
|||..||..||.|||||| .|||||| |||...||||..||||||
RBAM_013340__ 1 ---ATGTCAGCAACTAAAACAAGTCTTTAT--GAACAATTAACAGAAAGC 45
BSNT_02283___ 49 TCCGCTGTGGCGTTGGCGGTGAAGCTTGGCCTTTTTCC-AAGCAAAAGCA 97
|||||.|..|||||.||.||.|||||.|| |||.|||| |||||||||||
RBAM_013340__ 46 TCCGCCGCCGCGTTAGCCGTCAAGCTCGG-CTTATTCCAAAGCAAAAGCA 94
BSNT_02283___ 98 CGCTGACATGCCAGGAGATCGGAGACGGCAACTTAAATTACGTTTTTCAT 147
|.||||||||||..||.|||||.||||||||.|||||||||||.||||||
RBAM_013340__ 95 CTCTGACATGCCGTGAAATCGGCGACGGCAATTTAAATTACGTCTTTCAT 144
BSNT_02283___ 148 ATTTATGATCAAGAACATGACAGAGCATTGATCATTAAACAGGCGGTTCC 197
.||||.|||.|||||.|..|.|.||.|.||||.|||||||||||..|.||
RBAM_013340__ 145 GTTTACGATAAAGAAAACAAAAAAGGACTGATTATTAAACAGGCAATCCC 194
BSNT_02283___ 198 GTATGCAAAAGTGGTGGGAGAAAGCTGGCCGCTGACAATCGACCGTGCAA 247
.||.||.|||||.||.||.||||||||||||||.||.||.|||||.||.|
RBAM_013340__ 195 TTACGCGAAAGTCGTCGGTGAAAGCTGGCCGCTTACCATTGACCGGGCGA 244
BSNT_02283___ 248 GAATCGAAAGCAGCGCTCTCATCCGTCAGGGCGAGCATGTGCCTCACCTG 297
||||||||||||||||.||||||||.||||||||.||.|||||.|||||.
RBAM_013340__ 245 GAATCGAAAGCAGCGCCCTCATCCGCCAGGGCGAACACGTGCCGCACCTC 294
BSNT_02283___ 298 GTTCCAAGAGTGTTT--TATTCTGATACGGAAATGGCCGTTACCGTCATG 345
||||| |...|||| |||||.|||||.|||||||||||.||.||.|||
RBAM_013340__ 295 GTTCC--GGCCGTTTACTATTCCGATACTGAAATGGCCGTCACGGTAATG 342
BSNT_02283___ 346 GAGGATCTCTCTCACCT-CAAGATCGCAAGAAAAGGACT-CATTAAGGGT 393
||.||.|||||.||..| |.| ||..||||||||||.|| |...|||||
RBAM_013340__ 343 GAAGACCTCTCGCATTTGCGA-ATTTCAAGAAAAGGGCTGCTGGAAGGG- 390
BSNT_02283___ 394 GAAAACTATC----CTCATCTGTCGCAGCACATCGGTGAATTTTTAGGAA 439
.|..|||||| ||.|||.|.| ||.|||||||||||||||||.|
RBAM_013340__ 391 CAGCACTATCCCAACTTATCCGCC----CATATCGGTGAATTTTTAGGGA 436
BSNT_02283___ 440 AAACACTTTTCTACTCATCAGATTACGCGCTTGAACCTAAGGTGAAAAAA 489
||||.|||||.||||||||.|||||.||||||||..|.||.||.||..|.
RBAM_013340__ 437 AAACGCTTTTTTACTCATCCGATTATGCGCTTGATGCGAAAGTAAAGCAG 486
BSNT_02283___ 490 CAGCTTGTTAAACAGTTTACAAATCCAGAGCTTTGCGACATTACGGAAAG 539
|||||.|..||.||||||||||||||.|||||||||.|.|||||||||||
RBAM_013340__ 487 CAGCTCGCAAAGCAGTTTACAAATCCTGAGCTTTGCAATATTACGGAAAG 536
BSNT_02283___ 540 ACTTGTTTTTACAGATCC-TTTCTTCGACCATGACACAAATGATTTTGAA 588
.|||||.||||||||.|| |||| ||||||||||.|||||.|||||||||
RBAM_013340__ 537 GCTTGTGTTTACAGAACCGTTTC-TCGACCATGAGACAAACGATTTTGAA 585
BSNT_02283___ 589 GAAGAGCTTCGTCCTTTTGTCGAAAAGCTCTGGAATAATGACAGCGTTAA 638
||.|||||.||.||.|..|..|||||..|.|||||.|||..|.|..|.||
RBAM_013340__ 586 GAGGAGCTGCGCCCATACGCAGAAAAAGTTTGGAACAATTCCCGGCTGAA 635
BSNT_02283___ 639 AATCGAAGCCGCTAAGCTGAA---AAAGTCATTTTT---AACGTCTGCGG 682
| ||||.|||| |..||| ||||.|||.||| || .||.||||
RBAM_013340__ 636 A---GAAGGCGCT--GACGAATTGAAAGCCATCTTTCTGAA-TTCCGCGG 679
BSNT_02283___ 683 AAACGTTGATTCATGGTGATTTGCATACAGGAAGCATTTTCGCAAGTGAG 732
||||.|||.||||.||||||.||||.||.||||||||.|||||...|||.
RBAM_013340__ 680 AAACATTGGTTCACGGTGATCTGCACACGGGAAGCATCTTCGCCGATGAA 729
BSNT_02283___ 733 CACGAAACAAAGGTGATTGATCCTGAGTTTGCTTTTTACGGACCGATCGG 782
||.||||||||||||||||||||.|||||||||||.|.||||||||||||
RBAM_013340__ 730 CATGAAACAAAGGTGATTGATCCCGAGTTTGCTTTCTTCGGACCGATCGG 779
BSNT_02283___ 783 CTTTGATGTAGGGCAATTTATCGCCAACTTATTTTTGAACGCACTCAGCC 832
.||||||.|.||.||||||||||||||..|..|.||.|||||.|||||||
RBAM_013340__ 780 GTTTGATATCGGCCAATTTATCGCCAATCTGCTGTTAAACGCCCTCAGCC 829
BSNT_02283___ 833 GTGACGAGGCTGACAGAGAGCCGTTATATGAACATGTCAAC--CAG--GT 878
|.||||..|..||||||.|||||||||||||.||| || |.| ||
RBAM_013340__ 830 GCGACGGTGACGACAGACAGCCGTTATATGATCAT----ACTGCCGCCGT 875
BSNT_02283___ 879 CTGGGAAACGTTTGAAGAGACGTTTAGTGAAGCCTGGCAGAAGGACAGTC 928
.|||||.||.||||...|.||.||.||||||||.|||.|||| ||.|
RBAM_013340__ 876 ATGGGATACATTTGTGAAAACATTCAGTGAAGCATGGGAGAA----AGAC 921
BSNT_02283___ 929 TGGATG--TTTACGCCAACA-----TCGACGGTTACCTCACTG--ATACG 969
||..|| ||..|||..||| |.||.| .|.||||| |.|||
RBAM_013340__ 922 TGCTTGCCTTCCCGCAGACACCTGCTGGAAG----ACACACTGAAAAACG 967
BSNT_02283___ 970 CTCAGCCATATTTTTGAAGAAGCAATCGGATTTGCGGGCTGTGAGCTGAT 1019
| .|||||.|||||..||||.||||||||.||.||.|||||
RBAM_013340__ 968 C----------GTTTGAGGAAGCGGTCGGTTTTGCGGGATGCGAACTGAT 1007
BSNT_02283___ 1020 ACGACGCACGATCGGCCTTGCCCACGTAGCTGACCTGGATACGATCTTGC 1069
.||.|||||||||||.||.||.||.||.||||||.|.|||...|||...|
RBAM_013340__ 1008 CCGGCGCACGATCGGACTCGCTCATGTGGCTGACTTAGATGAAATCACTC 1057
BSNT_02283___ 1070 CGTTTGATAAACGAAT----TGGCAGAAAACGTCTGGCGCTCGAAACCGG 1115
|||||||.|||||||| .||.|||| .||||||||.||.|.|||
RBAM_013340__ 1058 CGTTTGACAAACGAATCGAACGGAAGAA----GCTGGCGCTTGACATCGG 1103
BSNT_02283___ 1116 CACAGCC---TTTATCGAAAAACGTTCGGAATTCAA---AACGATA--AC 1157
| ||| |.||||||||| |.|||...|| ||..||| ||
RBAM_013340__ 1104 C---GCCTATTATATCGAAAA-----CAGAAAAGAACTGAAGCATATCAC 1145
BSNT_02283___ 1158 AGATGTTATTGAATTATTTAAGTTACTTGTAAAGGAATGA 1197
.||.|||.|.||...|||||||.|.|.|||||||||||||
RBAM_013340__ 1146 CGAGGTTCTGGACCAATTTAAGCTCCGTGTAAAGGAATGA 1185
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