Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02282 and RBAM_013330
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:58
# Commandline: needle
# -asequence dna-align/BSNT_02282___mtnA.1.9828.seq
# -bsequence dna-align/RBAM_013330___mtnA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02282___mtnA-RBAM_013330___mtnA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02282___mtnA-RBAM_013330___mtnA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02282___mtnA
# 2: RBAM_013330___mtnA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1097
# Identity: 814/1097 (74.2%)
# Similarity: 814/1097 (74.2%)
# Gaps: 70/1097 ( 6.4%)
# Score: 3009.0
#
#
#=======================================
BSNT_02282___ 1 ATGACCCATTCATTTGCTGTTCCACGTTCTGTTGAATGGAAAGAAACAGC 50
||||||.||..||||||..|.||.||||||||.|||||||||||||| |
RBAM_013330__ 1 ATGACCAATGAATTTGCCATCCCCCGTTCTGTAGAATGGAAAGAAAC--C 48
BSNT_02282___ 51 T--ATTACCATTTTAAATCAGCAAAAGCTTCCTGATGAGACGGAATATTT 98
| ||...||||||||||||||||||||||||.||.|..||.||||||.|
RBAM_013330__ 49 TACATCCGCATTTTAAATCAGCAAAAGCTTCCCGACGTCACTGAATATGT 98
BSNT_02282___ 99 GGAGC-TGACGACGAAAGAGGATGTATTTGATGCGATTGTCACGCTCAAA 147
|||.| ||| .||.||.||.||||||||.||.||||||||||||||.|||
RBAM_013330__ 99 GGAACTTGA-AACAAAGGAAGATGTATTCGACGCGATTGTCACGCTGAAA 147
BSNT_02282___ 148 GTAAGGGGCGCTCCGGCGATCGGCATTACGGCTGCCTTCGGGCTGGCGCT 197
|||||||||||.|||||.|||||.||.||.||.||.|||||.||.|||||
RBAM_013330__ 148 GTAAGGGGCGCCCCGGCCATCGGTATAACCGCGGCGTTCGGACTCGCGCT 197
BSNT_02282___ 198 TGCTGCCAAAAACATTGAA-------ACAGATAATGTCACGGAATTCCGC 240
..|.|||||.....||||| || .|.||| ||.|||||.
RBAM_013330__ 198 CTCCGCCAAGTCGTTTGAAGCCCGCGAC-----CTTTCA--GATTTCCGA 240
BSNT_02282___ 241 CG-CAGACTGGAAGACATCAAACAATATTTAAACAGCTCACGGCCTACCG 289
|| ||| .|.|.|||..|||||...|||||||||||.||..||||.||.|
RBAM_013330__ 241 CGTCAG-TTCGCAGATGTCAAAACGTATTTAAACAGTTCGAGGCCCACTG 289
BSNT_02282___ 290 CCATTAATTTGTCATGGGCGCTTGAGAGACTGAGTCATTCGGTCGAAAAC 339
||.|.||..|..|.|||||||||||.|||||||...||||..||....|.
RBAM_013330__ 290 CCGTCAACCTCGCGTGGGCGCTTGACAGACTGACGGATTCCATCAGGGAT 339
BSNT_02282___ 340 GCGATTTCCGTAAATGAAGCAAAAACAAACCTTGTCCATGAAGCCATTCA 389
|||||.||..|.||||||||.||.||||..||.||.||||||||||||||
RBAM_013330__ 340 GCGATCTCAATCAATGAAGCGAAGACAACGCTCGTTCATGAAGCCATTCA 389
BSNT_02282___ 390 GATTCAGGTCGAGGATGAGGAAACGTGCCGGTTGATCGGCCAAAACGCCC 439
.||||||.|.||||||||.|||||.|||||..||||||||||.||.||.|
RBAM_013330__ 390 AATTCAGATTGAGGATGAAGAAACATGCCGAATGATCGGCCAGAATGCGC 439
BSNT_02282___ 440 TGCAGCTTTTCAAAAAAGGCGACAGGATCATGACAATCTGCAATGCCGGC 489
||||.|||||.||||||||||||..|||||||||.|||||||||||.|||
RBAM_013330__ 440 TGCACCTTTTTAAAAAAGGCGACCAGATCATGACCATCTGCAATGCGGGC 489
BSNT_02282___ 490 TCAATCGCGACAAGCCGCTATGGAACGGCGCTAGCTCCGTTTTACTTGGC 539
||.||.||.||||||||.||.||.||||||||.||.||.||||||||.||
RBAM_013330__ 490 TCGATTGCCACAAGCCGATACGGTACGGCGCTTGCCCCCTTTTACTTAGC 539
BSNT_02282___ 540 CAAACAAAAAGATTTGGGATTGCACATTTATGCCTGTGAAACAAGGCCTG 589
.||||||||||||.|.||..|.||.||.||.||.|||||||||||.||.|
RBAM_013330__ 540 GAAACAAAAAGATCTCGGCCTTCATATCTACGCATGTGAAACAAGACCCG 589
BSNT_02282___ 590 TCCTGCAAGGTTCACGCCTTACTGCTTGGGAGCTGATGCAGGGGGGCATT 639
|.||.|||||.|||||.||.||.||.|||||||||||||||||.||.|||
RBAM_013330__ 590 TTCTCCAAGGATCACGGCTGACGGCGTGGGAGCTGATGCAGGGCGGAATT 639
BSNT_02282___ 640 GATGTCACTCTGATCACAGACAGCATGGCCGCCCATACGATGAAGGAAAA 689
||||||||.||.||.||.||||||||||||||||||||.|||||||||||
RBAM_013330__ 640 GATGTCACGCTCATTACCGACAGCATGGCCGCCCATACAATGAAGGAAAA 689
BSNT_02282___ 690 ACAAATTTCCGCTGTTATCGTCGGAGCCGACCGAATTGCAAAGAACGGTG 739
|||.|||||.||.||.||.|||||.||.|||.||||||||||.|||||||
RBAM_013330__ 690 ACATATTTCTGCGGTCATTGTCGGCGCTGACAGAATTGCAAAAAACGGTG 739
BSNT_02282___ 740 ATACGGCAAATAAAATCGGCACATACGGTCTTGCTGTTTTAGCAAACGCC 789
|||||||.||.||||||||.||.|||||.||.|||.||||.|||||||||
RBAM_013330__ 740 ATACGGCCAACAAAATCGGAACGTACGGCCTCGCTATTTTGGCAAACGCC 789
BSNT_02282___ 790 TTTGATATTCCGTTTTTTGTCGCCGCACCTTTATCTACATTTGA--TACA 837
|||.|.||||||||||||||.||||||||..|.||.|||||||| |.|
RBAM_013330__ 790 TTTCAAATTCCGTTTTTTGTGGCCGCACCGCTTTCGACATTTGACTTGC- 838
BSNT_02282___ 838 AAGGTCAAATGCGGCGCTGATATCCCGATAGAGGAACGGGATCCCGAGGA 887
||.|..||..|||||.|.|.||.|||||.||.||..|.|||||.||.||
RBAM_013330__ 839 -AGATTGAAAACGGCGATCAGATTCCGATTGAAGAGAGAGATCCGGATGA 887
BSNT_02282___ 888 AGTCAGGCAGATTTCCGGAGTTCGGACCGCTCCATCCA--ATGTGCCTGT 935
||||||.|||||.|||||..|.||.|||||||| |.| |||||||.||
RBAM_013330__ 888 AGTCAGACAGATCTCCGGCATACGCACCGCTCC--CGAAGATGTGCCGGT 935
BSNT_02282___ 936 CTTTAATCCCGCTTTCGACATTACACC--TCATGATCTCATTTCAGGAAT 983
|||.|||||.||.||.|||||.||||| .|| ..||.|||||.||.||
RBAM_013330__ 936 CTTCAATCCGGCCTTTGACATCACACCGGGCA--GCCTGATTTCCGGCAT 983
BSNT_02282___ 984 CATCACAGAAAAAGGGATTATGACCGG-----AAACTATGAAGAAGAGAT 1028
.||.||.||.|||||.|||.||||||| |.|| .|||||.||
RBAM_013330__ 984 TATAACCGAGAAAGGAATTGTGACCGGTTCTTACAC-----GGAAGAAAT 1028
BSNT_02282___ 1029 TGAACA-------GCTGTTT------AGAGGAGAAAAGGTGCATTAA 1062
|||||| ||||..| .|||..||
RBAM_013330__ 1029 TGAACAATTATTCGCTGACTGCCAGCTGAGCTGA------------- 1062
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