Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02238 and RBAM_013130

See Amino acid alignment / Visit BSNT_02238 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:56
# Commandline: needle
#    -asequence dna-align/BSNT_02238___tnrA.1.9828.seq
#    -bsequence dna-align/RBAM_013130___tnrA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02238___tnrA-RBAM_013130___tnrA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02238___tnrA-RBAM_013130___tnrA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02238___tnrA
# 2: RBAM_013130___tnrA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 333
# Identity:     272/333 (81.7%)
# Similarity:   272/333 (81.7%)
# Gaps:           0/333 ( 0.0%)
# Score: 1116.0
# 
#
#=======================================

BSNT_02238___      1 ATGACCACAGAAGATCATTCTTATAAAGACAAAAAAGTGATTTCAATCGG     50
                     |||||.|||||.||.||.|||||.|||||.||||||||.||.||.|||||
RBAM_013130__      1 ATGACGACAGACGAACAATCTTACAAAGATAAAAAAGTAATCTCGATCGG     50

BSNT_02238___     51 AATTGTGAGTGAATTGACAGGATTGTCCGTAAGACAGATCAGGTATTATG    100
                     .|||||.||.|||||.||.||||||||.||.|||||||||||.||.||||
RBAM_013130__     51 CATTGTAAGCGAATTAACCGGATTGTCAGTCAGACAGATCAGATACTATG    100

BSNT_02238___    101 AGGAACGAAAGCTCATTTACCCGCAGCGTTCTTCAAGGGGGACAAGAAAA    150
                     |.|||||.||..|.||.||.|||||||||||.|||.||||.||.|||||.
RBAM_013130__    101 AAGAACGGAAATTAATCTATCCGCAGCGTTCATCACGGGGAACGAGAAAG    150

BSNT_02238___    151 TACTCCTTTGCCGATGTGGAGCGGCTGATGGATATCGCCAATAAGCGTGA    200
                     ||.|||||.||.||.||.|||||||||||||||||.|||||.|||||.||
RBAM_013130__    151 TATTCCTTCGCGGACGTTGAGCGGCTGATGGATATTGCCAACAAGCGGGA    200

BSNT_02238___    201 AGACGGCGTACAGACGGCAGAGATTTTAAAGGATATGCGCAAAAAAGAAC    250
                     |||||||||.||||||||.|||||||||||.||.|||||.||||||||||
RBAM_013130__    201 AGACGGCGTGCAGACGGCTGAGATTTTAAAAGACATGCGAAAAAAAGAAC    250

BSNT_02238___    251 AGATGTTAAAAAACGATCCGCAAGTGCGGAAAAAAATGCTGGAGGGGCAG    300
                     ||....|.||||||||.|||||..|.||.||||||||||||||.||.|||
RBAM_013130__    251 AGGCTCTCAAAAACGACCCGCAGCTCCGCAAAAAAATGCTGGAAGGACAG    300

BSNT_02238___    301 CTTAATGCTCACTTTCGGTACAAAAACCGTTAA    333
                     |||||||||||.|||..|||.||||||||.|.|
RBAM_013130__    301 CTTAATGCTCATTTTAAGTATAAAAACCGCTGA    333


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