Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02205 and RBAM_012930
See
Amino acid alignment /
Visit
BSNT_02205 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:54
# Commandline: needle
# -asequence dna-align/BSNT_02205___proB.1.9828.seq
# -bsequence dna-align/RBAM_012930___proB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02205___proB-RBAM_012930___proB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02205___proB-RBAM_012930___proB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02205___proB
# 2: RBAM_012930___proB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1131
# Identity: 852/1131 (75.3%)
# Similarity: 852/1131 (75.3%)
# Gaps: 51/1131 ( 4.5%)
# Score: 3178.0
#
#
#=======================================
BSNT_02205___ 1 ATGAAAAAACAAAGAATAGTAGTGAAAATAGGAAGCAGTTCGCTCACAAA 50
|||||||||||||||||.||.||||||||.||.|||||.||||||||.||
RBAM_012930__ 1 ATGAAAAAACAAAGAATTGTTGTGAAAATCGGGAGCAGCTCGCTCACCAA 50
BSNT_02205___ 51 TAGCAAAGGAAGCATTGATGAGGCAAAAATCAGAGAGCATGTTCAGGCCA 100
.||.||.|||||.||||||||.||||||||||..||.|||....|.||||
RBAM_012930__ 51 CAGTAACGGAAGTATTGATGAAGCAAAAATCAAGGAACATACGGAAGCCA 100
BSNT_02205___ 101 TTTCCGTGTTAAAA-AAAGCGGGGCATGAAATGATTCTGATTACCTCGGG 149
||||..|.|||||| |||.| |||||||||.||||.||.||||||||.||
RBAM_012930__ 101 TTTCTTTATTAAAAGAAAAC-GGGCATGAAGTGATCCTCATTACCTCAGG 149
BSNT_02205___ 150 TGCCGTAGCGGCGGGGTTTTCCAGC-CTCGGTTATCCGTCCCGTCCCGTT 198
.||.||.||.|||||.|||||| || |||||.||||||||.||.||||||
RBAM_012930__ 150 CGCGGTGGCAGCGGGTTTTTCC-GCTCTCGGCTATCCGTCGCGACCCGTT 198
BSNT_02205___ 199 ACCATCAAAGGAAAACAGGCGGCGGCCGCGGTCGGACAAACACTGTTAAT 248
||.||.||||||||.|||||.||.|||||.|||||.||.|||||.|||||
RBAM_012930__ 199 ACGATAAAAGGAAAGCAGGCAGCTGCCGCAGTCGGCCAGACACTTTTAAT 248
BSNT_02205___ 249 GCAGCAATATATGAATCAATTTAAACA-ATACTCACTGACTCCGGGACAA 297
|||||||||||||.| |.|||||||.| ||||...|||||.||||.||||
RBAM_012930__ 249 GCAGCAATATATGGA-CCATTTAAAAAGATACGGTCTGACGCCGGCACAA 297
BSNT_02205___ 298 ATCCTTTTAACGAGAAATGATTTTTCGAAAAGAGAACGGTATCGAAACGC 347
||..|.|||||.|||||||||||.||.||||||||.|||||..||||.||
RBAM_012930__ 298 ATTTTATTAACAAGAAATGATTTCTCAAAAAGAGAGCGGTACAGAAATGC 347
BSNT_02205___ 348 GTATGCTACGATAATGGAATTATTAGAGCGGGGCGTCATTCCGATTATCA 397
.|||||.||..||||||||.|.||.||||||||.|||.|.||||||||.|
RBAM_012930__ 348 CTATGCCACTGTAATGGAACTGTTGGAGCGGGGAGTCGTGCCGATTATTA 397
BSNT_02205___ 398 ACGAGAACGATTCTACATCTGTTGAAGAATTGACATTCGGAGATAATGAT 447
|.||.||.|||||.|||||.||.|||||..||||.|||||.|||||.||.
RBAM_012930__ 398 ATGAAAATGATTCCACATCAGTCGAAGAGCTGACGTTCGGTGATAACGAC 447
BSNT_02205___ 448 ATGCTTTCTGCGTTAGTCAGCGGATTGATTCACGCGGACCAGCTCATGAT 497
|||||.||.|||.|.||.|||||.||||||||.||.|||||..|.|||||
RBAM_012930__ 448 ATGCTGTCGGCGCTTGTAAGCGGTTTGATTCATGCAGACCAATTAATGAT 497
BSNT_02205___ 498 TCTCACCGACATTAACGGACTGTATGATGCCAATCCAAATGAAAATCCTG 547
||||||.|||||||||||.|||||.|||||||||||.||||||||.||.|
RBAM_012930__ 498 TCTCACAGACATTAACGGGCTGTACGATGCCAATCCGAATGAAAACCCGG 547
BSNT_02205___ 548 AGGCGAAACGATTTGATTATTTGCCGGAGATCACGCCTGAATTGCTTGGA 597
|.||.||.||.||.||.|||.||...||.|||||.||.||||||||.|||
RBAM_012930__ 548 ACGCAAAGCGGTTCGACTATCTGAATGACATCACACCAGAATTGCTCGGA 597
BSNT_02205___ 598 TATGCAGGTTCAGCCGGATCAAAGGTCGGCACCGGCGGAATGAAATCAAA 647
|||||.||.|||||.||.|||||||||||||||||.||.|||||.|||||
RBAM_012930__ 598 TATGCCGGATCAGCAGGCTCAAAGGTCGGCACCGGAGGCATGAAGTCAAA 647
BSNT_02205___ 648 GCTGTTAGCCGCACAAACCGCGCTGTCTCTGGGAGTGAAAGTATTCATTG 697
.||..|.|||||.||.|||||..||||.||.||.||.||.|||||.||.|
RBAM_012930__ 648 ACTTCTCGCCGCCCAGACCGCATTGTCGCTCGGGGTAAAGGTATTTATCG 697
BSNT_02205___ 698 GAACAGGCAGCGGAGAGCAAAAACTTGCGGAT----ATTTTGGACGGCAG 743
||||.|||..||||..|.||||||| ||| |||||.|||||.|.
RBAM_012930__ 698 GAACCGGCTCCGGACGGGAAAAACT----GATGGTGATTTTAGACGGAAA 743
BSNT_02205___ 744 GGGAGACGGCACTTATATCGGAGACAAAGAACTATCTTCGGTTAACAACA 793
.||.||||||||.||||||||.||.|||||.||.||.||.||.||.||.|
RBAM_012930__ 744 AGGCGACGGCACATATATCGGCGATAAAGACCTGTCCTCAGTGAATAATA 793
BSNT_02205___ 794 CAAGGCAGTGGATTCA-GTTCCACTCGCCGATATCGGGAGAAATTATCAT 842
||.||||.|||| ||| |||.||.||.||||||||.||.|||||.|||||
RBAM_012930__ 794 CACGGCAATGGA-TCATGTTTCATTCTCCGATATCAGGGGAAATCATCAT 842
BSNT_02205___ 843 TGATGCGGGTGCCGAGGAGGCGATGATCCATAATGG---AAGCAGCCTTT 889
|||||.|||.||.|||.||||||||||||||||.|| |||...|||
RBAM_012930__ 843 TGATGGGGGAGCGGAGCAGGCGATGATCCATAACGGGTCAAGTCTCCT-- 890
BSNT_02205___ 890 TGCCC-GCTGGCGTTGTGGGTGTGAACGGAAGCTTTCCGAAAGGGGCGGT 938
||| ||.|||||.|..|.|||...|||.||.||||||||||||||.||
RBAM_012930__ 891 --CCCGGCCGGCGTCGCCGATGTCTGCGGCAGTTTTCCGAAAGGGGCCGT 938
BSNT_02205___ 939 TGTGGAAGTCAGGGGACCGGGCGGCGTGATCGGCAAAGGCCAAACCCATT 988
.||||||||||..||.||.||||||.|.|||||||||||.||.||.||.|
RBAM_012930__ 939 AGTGGAAGTCAAAGGGCCCGGCGGCATTATCGGCAAAGGGCAGACGCAGT 988
BSNT_02205___ 989 ACTCCTCTGAGGAGATTATGGAGGCCAAGGGCAAACGCAGTGACGAACTT 1038
||||.||.||.||.|||.|.||.|.|||.||.||.||.||.|||.|.|
RBAM_012930__ 989 ACTCATCCGATGAAATTTTAGAAGTCAAAGGGAAGCGGAGCGACCAGC-- 1036
BSNT_02205___ 1039 GATTTTGAGAAAAC------GTTTGAGGTTATTCATAGGAATGACTGGGT 1082
|||.|| .||| |.|.||.||.|||||.||..||||.|||||
RBAM_012930__ 1037 ---TTTCAG-GAACGAAGCAGGTGGAAGTGATTCACAGAGATGATTGGGT 1082
BSNT_02205___ 1083 CAATGTAAAAGACTAG--------------- 1098
.|||.||...|||.||
RBAM_012930__ 1083 GAATTTATTTGACGAGGGGGAACACAAATGA 1113
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.