Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02172 and RBAM_012690
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:51
# Commandline: needle
# -asequence dna-align/BSNT_02172___pit.1.9828.seq
# -bsequence dna-align/RBAM_012690___pit.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02172___pit-RBAM_012690___pit.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02172___pit-RBAM_012690___pit.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02172___pit
# 2: RBAM_012690___pit
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1007
# Identity: 802/1007 (79.6%)
# Similarity: 802/1007 (79.6%)
# Gaps: 13/1007 ( 1.3%)
# Score: 3207.0
#
#
#=======================================
BSNT_02172___ 1 ATGGATATTCTATTAATATTAACGATACTAATAGTCATTTGTGCTCTGGC 50
|||||||.|||||||.|.|||||||||.||||.|||||.||.|||.|||.
RBAM_012690__ 1 ATGGATACTCTATTACTTTTAACGATATTAATTGTCATATGCGCTTTGGT 50
BSNT_02172___ 51 GTTTGATTTCATCAACGGGTTTCATGATACGGCAAACGCAATTGCGACTT 100
.|||||.|||||.|||||.|||||.|||||.|||||||||||.||.||.|
RBAM_012690__ 51 ATTTGACTTCATTAACGGATTTCACGATACCGCAAACGCAATCGCCACCT 100
BSNT_02172___ 101 CAGTATCAACAAAAGCGTTGAAACCGCGCCATGCCATTATATTGGCGGCT 150
||||.||.|||||||||.||||.|||||.||.||.||..|..||||.||.
RBAM_012690__ 101 CAGTTTCGACAAAAGCGCTGAAGCCGCGGCACGCAATCGTCATGGCCGCC 150
BSNT_02172___ 151 GTGATGAACTTTATCGGAGCAATGACGTTTACGGGTGTTGCCAAAACCAT 200
.|.|||||||||.|||||||.|||||.|||||.|||||.||.||||||||
RBAM_012690__ 151 ATCATGAACTTTCTCGGAGCGATGACATTTACCGGTGTGGCGAAAACCAT 200
BSNT_02172___ 201 TACGAAAGACATCGTAGATCCTTATACGCTGGAAAATGGCTCTGTTGTCA 250
|||.||.|||||.||..||||||||||..|.||.||.||.||.|||||||
RBAM_012690__ 201 TACAAAGGACATTGTGAATCCTTATACATTAGACAACGGGTCAGTTGTCA 250
BSNT_02172___ 251 TTTTGGCTGCGCTACTCGCTGCAATTGCCTGGAACCTTATCACATGGTAC 300
||.||||.||..|||||||.|||||.|.|||||||.|.|||||||||||.
RBAM_012690__ 251 TTCTGGCGGCTTTACTCGCCGCAATCGTCTGGAACTTGATCACATGGTAT 300
BSNT_02172___ 301 TACGGTATCCCAAGCAGCTCATCCCATGCCATCATCGGCGCTATTGCCGG 350
|.|||.||.||.||||||||.||.|||||.||.|||||.||.||.|||||
RBAM_012690__ 301 TTCGGCATTCCGAGCAGCTCTTCACATGCGATTATCGGAGCGATCGCCGG 350
BSNT_02172___ 351 TGCAGCCATTGCGGCAGCCGGATTTGCAGCGTTAAACTATAAGGGCTTCA 400
.||.||||||||.||..|.||.||||||.||.|.||.|||||.||.||||
RBAM_012690__ 351 AGCGGCCATTGCAGCGTCAGGTTTTGCAACGCTTAATTATAAAGGGTTCA 400
BSNT_02172___ 401 TTAAAATCATTGAAGCACTGATCCTATCACCAATTATTGCCTTTGTCCTT 450
|||||||.||.||||||||.||..|||||||.||.||.||||||||.||.
RBAM_012690__ 401 TTAAAATTATCGAAGCACTTATTTTATCACCGATCATCGCCTTTGTTCTC 450
BSNT_02172___ 451 GGTTTTATTCTTTATAGCATCGTTAAGCTGATTTTCAAAGACAGCAACTT 500
||.|||||..|.|||...|||||.|||||||||||.|||||||||||..|
RBAM_012690__ 451 GGCTTTATCGTATATTCGATCGTGAAGCTGATTTTTAAAGACAGCAATCT 500
BSNT_02172___ 501 GGCGAAAACGAATAAGCAATTCCGCAGAGTGCAGATTGTAACAGCTGCCC 550
|||||||||.|||||.|..||||||||||||||||||.|.||.||||||.
RBAM_012690__ 501 GGCGAAAACAAATAAACGCTTCCGCAGAGTGCAGATTTTGACGGCTGCCA 550
BSNT_02172___ 551 TGCAATCGTATACACACGGAACAAACGATGCGCAAAAAGCAATGGGAATT 600
|.||.||.||||||||||||||.|||||.|||||||||||.|||||.||.
RBAM_012690__ 551 TTCAGTCCTATACACACGGAACGAACGACGCGCAAAAAGCGATGGGTATC 600
BSNT_02172___ 601 ATCACAATGGCTCTCATCACAGCGAATTTACATACTTCTGCTAA--TGAT 648
||.||.|||||.||.||.||.||.|||||||||| || ||||
RBAM_012690__ 601 ATTACGATGGCGCTTATGACGGCCAATTTACATA--------AAAGTGAT 642
BSNT_02172___ 649 ---ATTCCTACCTGGGTGCAATTCGCCTGCGCGACAGCCATGGGTCTCGG 695
||||||...||||||||..||.|.||.||....||.|||||||||||
RBAM_012690__ 643 GCCATTCCTTTTTGGGTGCAGCTCTCTTGTGCCCTGGCAATGGGTCTCGG 692
BSNT_02172___ 696 AACATCAATCGGCGGCTGGAAAATCATCAAAACCGTTGGCGGAAAGATCA 745
.|||||.||||||||||||||||||||.||||||||.||||||||.||.|
RBAM_012690__ 693 CACATCCATCGGCGGCTGGAAAATCATTAAAACCGTCGGCGGAAAAATTA 742
BSNT_02172___ 746 TGAAAATCCGCCCGGTAAACGGTGTTTCCGCTGACTTAACCGGAGCAGCC 795
||||||||||.|||||||||||.||.||.||.|||||||||||.||||||
RBAM_012690__ 743 TGAAAATCCGTCCGGTAAACGGCGTATCTGCCGACTTAACCGGCGCAGCC 792
BSNT_02172___ 796 ATTATTTTCGGCGCCACGTTTATTCATTTGCCGGTCAGTACAACCCACGT 845
|||||||||||.|||||||||||||||.|.||.|||||.||.||.|||||
RBAM_012690__ 793 ATTATTTTCGGGGCCACGTTTATTCATCTCCCTGTCAGCACGACGCACGT 842
BSNT_02172___ 846 CATTTCTTCATCAATTCTTGGCGTCGGTGCGTCCCACCGCGTAAAAGGCG 895
||||||.||.||.|||||.||.||.||.||.|||||||||||||||||||
RBAM_012690__ 843 CATTTCGTCTTCCATTCTCGGTGTGGGCGCTTCCCACCGCGTAAAAGGCG 892
BSNT_02172___ 896 TAAACTGGGGTACGGCCAAGCGAATGCTCATTACATGGGTCATCACGCTT 945
||||||||||.|||||.||.||.|||||||||||||||||||||||.||.
RBAM_012690__ 893 TAAACTGGGGAACGGCTAAACGGATGCTCATTACATGGGTCATCACCCTG 942
BSNT_02172___ 946 CCGATTTCAGCGACACTTGGTGCCATCGCCTACTTTATTTTAAATATGAT 995
||||||.|||..|||||.||.||||||||||..||.||..||.||.|..|
RBAM_012690__ 943 CCGATTGCAGGTACACTCGGCGCCATCGCCTTTTTCATCCTAGATCTCTT 992
BSNT_02172___ 996 ATTTTAA 1002
.||.|.|
RBAM_012690__ 993 TTTCTGA 999
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