Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02121 and RBAM_012550
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:50
# Commandline: needle
# -asequence dna-align/BSNT_02121.1.9828.seq
# -bsequence dna-align/RBAM_012550.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02121-RBAM_012550.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02121-RBAM_012550.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02121
# 2: RBAM_012550
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 185
# Identity: 120/185 (64.9%)
# Similarity: 120/185 (64.9%)
# Gaps: 34/185 (18.4%)
# Score: 383.0
#
#
#=======================================
BSNT_02121 1 ATGTGCAAGCTTTGTCAAACAAAGAAAGTCATTGT---GGAACATACCGG 47
|||||.|||||.||.....|.|||||.|||||||| |||| ||.||
RBAM_012550 1 ATGTGTAAGCTGTGCGGGCCGAAGAAGGTCATTGTGACGGAA---ACGGG 47
BSNT_02121 48 TATTGGAGTCGTTTTTCATCCATGTCCGAACTGCCGGTCCGGCACTGACT 97
|.|.||.|..||.|||||.||.||.|||||||||....|.||||||||.|
RBAM_012550 48 TTTCGGCGCTGTCTTTCACCCTTGCCCGAACTGCAAAACAGGCACTGATT 97
BSNT_02121 98 TAACGCCTGTCATTCAAAAG-CTGGAGCAAATGCT----GACAGCGGGAA 142
|||||||.|||||| |||.| ||.||||.||||.| ||| |.||
RBAM_012550 98 TAACGCCGGTCATT-AAACGTCTTGAGCGAATGGTTCAAGAC----GCAA 142
BSNT_02121 143 AAGCGAGGCTGAATATCTATGAT---------TAA 168
|||||||||| |||| |||
RBAM_012550 143 AAGCGAGGCT---------TGATGCACGTGTATAA 168
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