Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02099 and RBAM_012420
See
Amino acid alignment /
Visit
BSNT_02099 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:49
# Commandline: needle
# -asequence dna-align/BSNT_02099___uxaA.1.9828.seq
# -bsequence dna-align/RBAM_012420___uxaA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02099___uxaA-RBAM_012420___uxaA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02099___uxaA-RBAM_012420___uxaA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02099___uxaA
# 2: RBAM_012420___uxaA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1524
# Identity: 1120/1524 (73.5%)
# Similarity: 1120/1524 (73.5%)
# Gaps: 60/1524 ( 3.9%)
# Score: 4004.0
#
#
#=======================================
BSNT_02099___ 1 TTGAA----GTCGTTTATAAAGATTCATAAGCAAGATAATATCCTTCTTG 46
.|||| ||| |||||.||.|||||..|.|||||..|.|||||.|
RBAM_012420__ 1 ATGAAAGAGGTC----ATAAAAATCCATAAAAACGATAACGTGCTTCTCG 46
BSNT_02099___ 47 CTCTGCGGGATATCCA-AAAGGGAGAGAGGCTGCATGCGGACGGCGTGTC 95
||.||||..||.|..| |||||| |||.||||||||.|.|||||..||.|
RBAM_012420__ 47 CTATGCGCCATTTTGACAAAGGG-GAGCGGCTGCATACAGACGGACTGAC 95
BSNT_02099___ 96 GATTGAAGTAAAGAATGATATAAAAAGAGGCCATAAGATTGCATTGCAGT 145
|||||||||.|||.|...|.||||..|.||.|||||.||.||..||||..
RBAM_012420__ 96 GATTGAAGTGAAGGACCCTGTAAAGCGGGGGCATAAAATCGCGCTGCAAA 145
BSNT_02099___ 146 CTATCAAAGAAAACGACAGCATCATCAAGTACGGGTTTCCAATCGGTCAT 195
|.||..|||||||||..||||||||.||.|||||.|||.|||||||.|.|
RBAM_012420__ 146 CCATTGAAGAAAACGGTAGCATCATTAAATACGGTTTTTCAATCGGGCGT 195
BSNT_02099___ 196 GCATCACAAG--ATATCTCGATCGGAGAGCATATTCATGTCCATAATACG 243
|| .||||| ..||.|||..|||.||||||||||||..|||||||..|
RBAM_012420__ 196 GC--GACAAGGCGGATTTCGGCCGGCGAGCATATTCATACCCATAATCTG 243
BSNT_02099___ 244 AAAACAAACCTGTCTGATATCCAATCATACAGCTATACACCGAGATTTGA 293
.||||.||..|.||.|||.|.|||..|||||..|||.|||||.|.||.||
RBAM_012420__ 244 CAAACGAATTTATCCGATGTGCAAGAATACACGTATTCACCGCGCTTCGA 293
BSNT_02099___ 294 TGAAAATCCGTATTCTAATGAGAACCGGACGTTTAAAGGTTTTAGAAGAG 343
.||.|||||.|.|.|.||||||||||||||.||||||||.|..|||||||
RBAM_012420__ 294 GGACAATCCTTTTACAAATGAGAACCGGACATTTAAAGGCTACAGAAGAG 343
BSNT_02099___ 344 AAAACGG-AGATGCGGGTGTACGGAATGAATTGTGGATTGTCCCAACTGT 392
||||||| |.|| |.||.||.|||||||||.|||||||.||.||.||.||
RBAM_012420__ 344 AAAACGGTACAT-CCGGCGTCCGGAATGAACTGTGGATCGTACCTACAGT 392
BSNT_02099___ 393 CGGCTGTGTCAATGGAATAGCAGAAAAAATGCTGCAGCGTTTTGTCAGAG 442
||||||.||.||.||..|.||.||.|||||.||||||||.||.||.|.||
RBAM_012420__ 393 CGGCTGCGTAAACGGCGTCGCTGAGAAAATCCTGCAGCGCTTCGTAAAAG 442
BSNT_02099___ 443 AAACAGGG-----GATATCGCTCCATTTGATAACGTACTGGTGTTAAAGC 487
| || ||.||.||.||.|||||.||.||.|||||.|||||||
RBAM_012420__ 443 A-----GGCGAAAGACATTGCGCCCTTTGACAATGTGCTGGTTTTAAAGC 487
BSNT_02099___ 488 ATCAATACGGATGCTCGCAGCTTGGCGATGATCACGAAAATACGAAGCAA 537
|.||||||||.|||||.|||||||||||||||||.||.||||||||.|||
RBAM_012420__ 488 ACCAATACGGCTGCTCCCAGCTTGGCGATGATCATGAGAATACGAAACAA 537
BSNT_02099___ 538 ATCCTGCTGAATGCCATTCGCCATCCAAATGCCGGCGGCGTCTTGGTGTT 587
||.|||.||||.|||||.||.|||||||||||.|||||.||..||||.||
RBAM_012420__ 538 ATGCTGATGAACGCCATCCGTCATCCAAATGCTGGCGGTGTGCTGGTTTT 587
BSNT_02099___ 588 AGGGCTTGGCTGTGAAAACAATGAGCTGGCAAGAATGAAGGAAGCACTGC 637
||||||.|||||||||||.|||||||||||....||.||||||.|.||..
RBAM_012420__ 588 AGGGCTCGGCTGTGAAAATAATGAGCTGGCGGCGATTAAGGAAACGCTTT 637
BSNT_02099___ 638 AAGATGTGAACCTGGAG--CGGGTGAAGTTTCTGGAATCCCAGTCGGTGA 685
..||.|||||| |||| ||||||||.|||||.|||||.||..|.||.|
RBAM_012420__ 638 CTGAAGTGAAC--GGAGATCGGGTGAAATTTCTCGAATCACAAGCTGTCA 685
BSNT_02099___ 686 CCGACGAAATGGAGGCAGGTGTTGCTTTGCTGAAGGAAATTCATGAAGCG 735
|.||.|||||.||.||.||...|||..|.||.||.||.||.||....|||
RBAM_012420__ 686 CAGATGAAATTGAAGCGGGGACTGCGCTTCTTAAAGAGATACACCTTGCG 735
BSNT_02099___ 736 GCCAAAGGAGATAAGAGAGAAGACATTCCGCTGTCTGAACTGAAGATCGG 785
||.||.||||||||..|.||.||.|||||||||||.|||.|||..|||||
RBAM_012420__ 736 GCAAAGGGAGATAAACGTGAGGAGATTCCGCTGTCAGAATTGAGCATCGG 785
BSNT_02099___ 786 GCTGAAATGCGGAGGTTCGGACGGTTTTTCCGGCATAACCGCAAACCCGC 835
..||||||||||.||.||||||||||||||||||||.|||||||||||..
RBAM_012420__ 786 ATTGAAATGCGGCGGGTCGGACGGTTTTTCCGGCATCACCGCAAACCCTT 835
BSNT_02099___ 836 TGCTTGGACGTTTTTCAGATTATCTCATTGCACAGGGAGGGAGCACGGTG 885
|..|.||..|.|||||||||||..|.|||||||||||||||||||||||.
RBAM_012420__ 836 TATTAGGGAGATTTTCAGATTACTTGATTGCACAGGGAGGGAGCACGGTC 885
BSNT_02099___ 886 CTGACGGAAGTACCGGAAATGTTCGGCGCAGAAACCATCCTGATGCAGCG 935
.|.|||||.||.||.||.|||||||||||.||.||.||.||.||||||||
RBAM_012420__ 886 TTAACGGAGGTGCCTGAGATGTTCGGCGCTGAGACGATTCTCATGCAGCG 935
BSNT_02099___ 936 GGCTGCCAATGAAGAAGTGTTTCATAAGATAGT-CGATTTAATCAATGAT 984
.||.||.|.||||||||||||||||||.|.||| ||| ||.|||||||||
RBAM_012420__ 936 TGCGGCGAGTGAAGAAGTGTTTCATAAAACAGTCCGA-TTGATCAATGAT 984
BSNT_02099___ 985 TTCAAACAATACTTTATTAAACATGATCAGCCGGTGTACGAAAATCCCTC 1034
|||||.|||||.|||||.||.||.||.||||||.|.||.|||||.||.||
RBAM_012420__ 985 TTCAAGCAATATTTTATGAAGCACGAGCAGCCGATTTATGAAAACCCGTC 1034
BSNT_02099___ 1035 ACCGGGCAACAAAGCGGGCGGCATTTCTACACTTGAGGATAAATCGCTGG 1084
|||.||.||.||.|..|||||||||||.||.||.||.||.||.|||||.|
RBAM_012420__ 1035 ACCAGGGAATAAGGAAGGCGGCATTTCAACGCTCGAAGACAAGTCGCTCG 1084
BSNT_02099___ 1085 GCTGTACGCAAAAAGCGGGGATTTCTCCTGTCACGGATGTCTTGAAATAC 1134
||||.||.||||||||.||..||.|.||.||..|.|||||..|||.||||
RBAM_012420__ 1085 GCTGCACCCAAAAAGCCGGTCTTGCACCGGTTTCTGATGTGCTGACATAC 1134
BSNT_02099___ 1135 GGGGAAGTGCTCAAGACAAGAGGG-CTGACGCTTTTGAGCGCGCCAGGCA 1183
||.|||...||.||.|||| |||| .||||.||..|.||.|||||.||||
RBAM_012420__ 1135 GGTGAAACACTGAAAACAA-AGGGATTGACACTGCTCAGTGCGCCCGGCA 1183
BSNT_02099___ 1184 ATGATTTGATCGCCTCCTCCGCATTGGCGGCGGCCGGCTGCCAAATTGTC 1233
|||||||.|||||.||.||.||..|.||.|||||.||.||.||.||.||.
RBAM_012420__ 1184 ATGATTTAATCGCTTCTTCAGCGCTCGCCGCGGCGGGTTGTCACATCGTT 1233
BSNT_02099___ 1234 CTCTTTACAACGGGGAGAGGCACGCCGTTTGGCAGCTTTGTCCCGACGGT 1283
.|.||||||||.||.||||||||||||||.||||..|||||||||||.||
RBAM_012420__ 1234 TTGTTTACAACCGGAAGAGGCACGCCGTTCGGCACATTTGTCCCGACTGT 1283
BSNT_02099___ 1284 GAAAGTAGCGACAAACACCGAGCTGTATGAAGCGAAGCCGCATTGGATTG 1333
|||||||.|.|||||.|||||..|.|.|.||.|.|||||.||||||||||
RBAM_012420__ 1284 GAAAGTATCAACAAATACCGATTTATTTCAATCAAAGCCTCATTGGATTG 1333
BSNT_02099___ 1334 ATTTTAACGCAGGCCTTTTAGCAGAGGA---------TGATGTTCA---T 1371
|||..|||||.|||...||.||.||.|| .||.|.||| |
RBAM_012420__ 1334 ATTACAACGCGGGCAGATTGGCGGAAGACCAAACAACAGAAGATCACATT 1383
BSNT_02099___ 1372 G-AGGAATATGTGCTGCGTGAGTTTATCCACTATATGGTTGAGGTGGCAA 1420
| |.|| ||.|||||.||.||.||..||.|.||.||||
RBAM_012420__ 1384 GTAAGA-------------GATTTTATACAATACATTATTAAAGTTGCAA 1420
BSNT_02099___ 1421 GCGGCCAGCTTGTGAACCATGAAAAAAATGATTTCAGAGAACTCGCCATT 1470
||||..|..|.||.||..|.||||||||.|||||..|.||.||.||.||.
RBAM_012420__ 1421 GCGGAGAATTCGTCAATAACGAAAAAAACGATTTTCGGGAGCTTGCAATC 1470
BSNT_02099___ 1471 TTTAAATCGGGTGTGACGCTATAA 1494
|||||.||.|||||||||.|||||
RBAM_012420__ 1471 TTTAAGTCCGGTGTGACGTTATAA 1494
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.