Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02085 and RBAM_012370
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:47
# Commandline: needle
# -asequence dna-align/BSNT_02085___yjlD.1.9828.seq
# -bsequence dna-align/RBAM_012370___yjlD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02085___yjlD-RBAM_012370___yjlD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02085___yjlD-RBAM_012370___yjlD.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02085___yjlD
# 2: RBAM_012370___yjlD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1179
# Identity: 1027/1179 (87.1%)
# Similarity: 1027/1179 (87.1%)
# Gaps: 0/1179 ( 0.0%)
# Score: 4527.0
#
#
#=======================================
BSNT_02085___ 1 ATGTCAAAACATATTGTCATTCTAGGCGCTGGTTATGGCGGAGTTCTTTC 50
|||||||||||||||||||||.|||||||||||||.||||||||||||||
RBAM_012370__ 1 ATGTCAAAACATATTGTCATTTTAGGCGCTGGTTACGGCGGAGTTCTTTC 50
BSNT_02085___ 51 TGCTCTAACAGTTCGCAAACATTACACAAAAGAACAAGCACGCGTGACAG 100
||||.||||.||||||||||||||||..|||||..||||||||||.||.|
RBAM_012370__ 51 TGCTTTAACCGTTCGCAAACATTACAGTAAAGATGAAGCACGCGTAACCG 100
BSNT_02085___ 101 TGGTAAACAAATACCCTACTCACCAAATCATTACGGAATTACACCGCCTT 150
|.||.|||||||||||.|||||||||||||||||||||.|.|||||||||
RBAM_012370__ 101 TTGTGAACAAATACCCGACTCACCAAATCATTACGGAACTGCACCGCCTT 150
BSNT_02085___ 151 GCTGCAGGCAACGTGTCTGAAAAAGCGGTTGCAATGCCATTAGAAAAACT 200
||.||.|||||||||||||||.|.||.|||||.|||||..|.||||||||
RBAM_012370__ 151 GCAGCGGGCAACGTGTCTGAACAGGCTGTTGCTATGCCGCTTGAAAAACT 200
BSNT_02085___ 201 TTTCAAAGGCAAAGACATTGATCTTAAAATTGCGGAAGTAAGTTCTTTCT 250
|.|.|||||.||||||.|.||..|.|||||.||.|||||.|.||||||||
RBAM_012370__ 201 TCTGAAAGGAAAAGACGTCGACATCAAAATCGCAGAAGTCAATTCTTTCT 250
BSNT_02085___ 251 CTGTTGATAAAAAAGAAGTTGCGCTTGCTGACGGTTCTACATTAACTTAC 300
|.||||||||.|||||||||||.|||.||||||||||||...|.|||||.
RBAM_012370__ 251 CAGTTGATAAGAAAGAAGTTGCCCTTTCTGACGGTTCTAAGCTGACTTAT 300
BSNT_02085___ 301 GATGCGCTTGTTGTAGGTCTTGGTTCGGTAACGGCTTACTTCGGCATCCC 350
||.|||||||||||.||.||||||||.||.||||||||.||||||||.||
RBAM_012370__ 301 GACGCGCTTGTTGTCGGACTTGGTTCTGTTACGGCTTATTTCGGCATTCC 350
BSNT_02085___ 351 AGGTCTTGAAGAAAACAGCATGGTATTGAAATCTGCTGCTGATGCGAACA 400
.||.||.|||||||||||||||||..|||||||||||||||||||.||||
RBAM_012370__ 351 TGGACTCGAAGAAAACAGCATGGTGCTGAAATCTGCTGCTGATGCCAACA 400
BSNT_02085___ 401 AAGTCTTCCAGCATGTTGAAGATCGTGTGCGCGAGTACTCTAAAACGAAA 450
||||.|.|.|.||.||.|||||.||||||||.||.|||.|||||||||||
RBAM_012370__ 401 AAGTATACAAACACGTGGAAGACCGTGTGCGTGAATACGCTAAAACGAAA 450
BSNT_02085___ 451 AATGAAGCAGATGCAACAATCCTTATCGGCGGCGGCGGCTTAACAGGCGT 500
||.|||||.||||||||.||||||||||||||||||||||||||||||||
RBAM_012370__ 451 AACGAAGCTGATGCAACGATCCTTATCGGCGGCGGCGGCTTAACAGGCGT 500
BSNT_02085___ 501 TGAGCTTGTTGGTGAGCTTGCTGACATCATGCCGAACCTTGCGAAAAAAT 550
|||||||||.||||||||||||||||||||||||||||||.|||||||||
RBAM_012370__ 501 TGAGCTTGTCGGTGAGCTTGCTGACATCATGCCGAACCTTACGAAAAAAT 550
BSNT_02085___ 551 ACGGCGTAGACCATAAAGAAATCAAATTGAAACTTGTTGAAGCAGGTCCG 600
||||||||||.|..||||.|||||||.|||||.|.||.||||||||||||
RBAM_012370__ 551 ACGGCGTAGATCCGAAAGCAATCAAACTGAAATTAGTAGAAGCAGGTCCG 600
BSNT_02085___ 601 AAAATCCTTCCTGTTCTTCCGGATGATCTTATCGAACGTGCGACTGCAAG 650
|||||.||||||||||||||.|||||.|||||||||||.|||||...|||
RBAM_012370__ 601 AAAATTCTTCCTGTTCTTCCTGATGACCTTATCGAACGCGCGACAAAAAG 650
BSNT_02085___ 651 CCTTGAAAAACGCGGCGTTGAGTTCTTAACAGGTCTTCCTGTTACAAATG 700
.|||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_012370__ 651 TCTTGAAAAACGCGGCGTTGAGTTCTTAACAGGTCTTCCTGTTACAAATG 700
BSNT_02085___ 701 TAGAAGGAAACGTAATTGATCTGAAAGACGGATCTAAAGTTGTTGCCAAC 750
|.|||||||||||.|||||||||||||||||.||.|||||.|||||||||
RBAM_012370__ 701 TTGAAGGAAACGTTATTGATCTGAAAGACGGTTCAAAAGTCGTTGCCAAC 750
BSNT_02085___ 751 ACATTTGTTTGGACTGGCGGCGTACAAGGTAACCCATTAGTCGGTGAATC 800
||||||||.|||||.||||||||||||||.|||||.||||||||.|||||
RBAM_012370__ 751 ACATTTGTATGGACAGGCGGCGTACAAGGCAACCCGTTAGTCGGCGAATC 800
BSNT_02085___ 801 AGGCCTAGAAGTGAACCGCGGACGCGCGACTGTAAATGACTTCCTGCAAT 850
.|||||.||||||||||||||.||.|||||.||.||.||.|||.|.||||
RBAM_012370__ 801 CGGCCTTGAAGTGAACCGCGGCCGTGCGACGGTTAACGATTTCTTACAAT 850
BSNT_02085___ 851 CTACATCTCATGAAGATGTATTCGTTGCTGGAGACAGCGCAGTTTACTTC 900
||||.||||||||||||||||||||||..|||||||||||.||.|||||.
RBAM_012370__ 851 CTACTTCTCATGAAGATGTATTCGTTGTCGGAGACAGCGCTGTATACTTT 900
BSNT_02085___ 901 GGTCCAGACGGCCGTCCATACCCGCCAACTGCACAAATCGCATGGCAAAT 950
|..||.|||||||||||.||||||||.||.||.||||||||.|||||.||
RBAM_012370__ 901 GCGCCGGACGGCCGTCCGTACCCGCCGACAGCGCAAATCGCTTGGCAGAT 950
BSNT_02085___ 951 GGGTGAGCTGATCGGTTACAACCTATTTGCTTACCTGGAAGGCAAAACGC 1000
||||||.||..|||||||||||||.||.||||||.|.|||||.|||||||
RBAM_012370__ 951 GGGTGAACTTGTCGGTTACAACCTGTTCGCTTACTTAGAAGGAAAAACGC 1000
BSNT_02085___ 1001 TTGAAACATTCAAGCCAGTAAACTCTGGTACACTTGCAAGCCTTGGACGC 1050
||||||||||||||||.||||||||||||||.|||||||||||.|||||.
RBAM_012370__ 1001 TTGAAACATTCAAGCCTGTAAACTCTGGTACGCTTGCAAGCCTCGGACGT 1050
BSNT_02085___ 1051 AAAGACGCGGTTGCCATCATTGGTGCTAATTCTACACCGCTTAAAGGTCT 1100
||||||||||||||||||||.||.||.||.|||||.|||||.||||||||
RBAM_012370__ 1051 AAAGACGCGGTTGCCATCATCGGAGCGAACTCTACTCCGCTGAAAGGTCT 1100
BSNT_02085___ 1101 TCCTGCTTCCTTGATGAAAGAAGCAAGTAACGTACGCTATTTAACACACA 1150
|||.||.||.||.|||||||||||||||||||||||.|||||||||||.|
RBAM_012370__ 1101 TCCGGCATCTTTAATGAAAGAAGCAAGTAACGTACGTTATTTAACACATA 1150
BSNT_02085___ 1151 TTAAAGGACTTTTCAGCCTGGCTTACTAA 1179
|.||||||.|.||||||||.|||||||||
RBAM_012370__ 1151 TCAAAGGATTATTCAGCCTCGCTTACTAA 1179
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