Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02082 and RBAM_012350
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:47
# Commandline: needle
# -asequence dna-align/BSNT_02082.1.9828.seq
# -bsequence dna-align/RBAM_012350___yjlB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02082-RBAM_012350___yjlB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02082-RBAM_012350___yjlB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02082
# 2: RBAM_012350___yjlB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 523
# Identity: 188/523 (35.9%)
# Similarity: 188/523 (35.9%)
# Gaps: 275/523 (52.6%)
# Score: 527.5
#
#
#=======================================
BSNT_02082 0 -------------------------------------------------- 0
RBAM_012350__ 1 ATGCAGAAAGAGGATATTCAAGTGCTTTATTTTGAAGATGACGGCCGCAT 50
BSNT_02082 0 -------------------------------------------------- 0
RBAM_012350__ 51 TCCGAATAACCCGAATCTTCCGCTTGTTATTTATAAAGCGGTATTTAATG 100
BSNT_02082 0 -------------------------------------------------- 0
RBAM_012350__ 101 AAGAAACGGTACAGAAAGCAGAGTCCGTCCTCAGCCGGCACGATTGGTCG 150
BSNT_02082 0 -------------------------------------------------- 0
RBAM_012350__ 151 AACAGCTGGACGGGCGGAGTATTTCCGTATCACCATTTTCACAGCACCAC 200
BSNT_02082 1 ----------------------------------GTGATTCA-GTTTGGG 15
|| .||.| |||.||.
RBAM_012350__ 201 GCACGAAGTTCTTGTCGCGGTAAAAGGAAACGCGGT-TTTGAGGTTCGGC 249
BSNT_02082 16 GGAGAAAAAGG---GGCTGCCATTCCTTTCAAATCCGGCGACGCAGTCGT 62
||.|||.|||| ||..|||.||| ||||||| .||.|||||||..||
RBAM_012350__ 250 GGGGAACAAGGAGCGGACGCCGTTC--TTCAAAT-GGGAGACGCAGCGGT 296
BSNT_02082 63 GATTCCAGCCGGAGTCGGCCATAAAAAGCT-AAGCGCAAGCTCCGATTTT 111
.|||||.|||||...|||.||||||||.|| ..|.|| ||.||.||||||
RBAM_012350__ 297 CATTCCGGCCGGCACCGGACATAAAAAACTGTCGGGC-AGTTCTGATTTT 345
BSNT_02082 112 ACCGTCATTGGCGCTTATCCGGGAGGCGTTCAGTATGATATGAAGACGG- 160
|||||.||.||.|||||||||||.|||...|||||.||||..||.||||
RBAM_012350__ 346 ACCGTGATCGGGGCTTATCCGGGCGGCCGGCAGTACGATACAAAAACGGA 395
BSNT_02082 161 GAGAGCCGAAT----GAACGGGAGGAAGCGGTCAAACAGATTAAGCAGGC 206
||.| ||| |||| .|||.| ||| ||.|||.|
RBAM_012350__ 396 GAAA----AATGATAGAAC-----------TTCAGA-AGA--AATCAGCC 427
BSNT_02082 207 G----GCGTTGCCGGCGAAT--GATCCGATCACAGGAAAAAGAGAGCCTC 250
| .||.|.||| |||| ||.||..|.||.|||||||..|..||.|
RBAM_012350__ 428 GTGTCCCGCTCCCG--GAATGCGACCCCTTTACGGGAAAAACGGGCCCGC 475
BSNT_02082 251 TATTGGAAATATGGGTAAAGTGA 273
||||..||.|.||||.|||.|||
RBAM_012350__ 476 TATTAAAATTGTGGGAAAAATGA 498
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