Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01978 and RBAM_011910
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:44
# Commandline: needle
# -asequence dna-align/BSNT_01978___yjcG.1.9828.seq
# -bsequence dna-align/RBAM_011910___yjcG.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01978___yjcG-RBAM_011910___yjcG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01978___yjcG-RBAM_011910___yjcG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01978___yjcG
# 2: RBAM_011910___yjcG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 522
# Identity: 401/522 (76.8%)
# Similarity: 401/522 (76.8%)
# Gaps: 12/522 ( 2.3%)
# Score: 1468.0
#
#
#=======================================
BSNT_01978___ 1 ATGAAATACGGAATCGTTTTATTTCCATCAAAAAAGCTTCAAGACCTTGC 50
|||||||||||.||.||||||||||||||||||||..|.||.||.||.||
RBAM_011910__ 1 ATGAAATACGGTATTGTTTTATTTCCATCAAAAAAATTACAGGATCTCGC 50
BSNT_01978___ 51 AAACTCTTACAGAAAGCGCTATGACCCAAGCTACTCTCTAATCCCGCCTC 100
|||.||.|||.|.||.|||||.|||||.||||||.|.||.||.||.||.|
RBAM_011910__ 51 AAATTCGTACCGGAAACGCTACGACCCGAGCTACGCGCTCATTCCTCCGC 100
BSNT_01978___ 101 ATTTGACGCTGAGAGCATCC-TTTGAATGCG-CGGAGGA-GAAAGCGGAT 147
|..|||||.|.|||| |||| |||||| ||| |.||..| ||||.| ||.
RBAM_011910__ 101 ACCTGACGGTAAGAG-ATCCGTTTGAA-GCGACAGAACAGGAAATC-GAG 147
BSNT_01978___ 148 CAGCTCGTATCACATTTAAGAAACATCGCAAAAGAGTCCCACCCACTCGT 197
|||.||||||||||..|.|||.|.|..||.||||||||.||.||.|||||
RBAM_011910__ 148 CAGGTCGTATCACAGCTGAGACAGACGGCGAAAGAGTCGCATCCGCTCGT 197
BSNT_01978___ 198 TCTCAAAATGACAAAATACAGCTCATTTGCGCCTGTCAATAATGTCATTT 247
|||.|||||.||||||||||||||.|||.|.|||||.||||||||.||.|
RBAM_011910__ 198 TCTGAAAATCACAAAATACAGCTCGTTTTCTCCTGTGAATAATGTGATAT 247
BSNT_01978___ 248 ACATCAAAGCAGAACCGACGGAAGAGTTAAAAACACTCAAT--GAAAAGC 295
|.||.||||||||.|||||||||||.||||||.|.||.|.| ||||.||
RBAM_011910__ 248 ATATGAAAGCAGAGCCGACGGAAGAATTAAAATCTCTGAGTGAGAAATGC 297
BSNT_01978___ 296 TATACACCGGTGTGTTGGCAGGAGAACAGGAATATAATTTTGTTCCGCAT 345
|||.|.||.|..||..|.||.||.|.||||||.|..||.|||||||||
RBAM_011910__ 298 --TACTCAGGAGCATTATCCGGCGAGCCGGAATACAGCTTCGTTCCGCAT 345
BSNT_01978___ 346 GTGACGGTCGGCCAAAATCTTTCCGAC-GATGAGCATTCAGATGTGCTGG 394
||.|||||||||||.||.||.| ||.| |||||.|||||.||.||.||.|
RBAM_011910__ 346 GTCACGGTCGGCCAGAAGCTGT-CGTCAGATGAACATTCCGACGTACTCG 394
BSNT_01978___ 395 GACAATTAAAAATGCAGGAAGTGTCGCATGAAGAAATCGTTGACCGTTTC 444
||||..|.|||||||||||..|.||.||.||||||.||.|.||||||||.
RBAM_011910__ 395 GACAGCTGAAAATGCAGGACATTTCCCACGAAGAAGTCATCGACCGTTTT 444
BSNT_01978___ 445 CACTTGCTTTACCAGCTGGAAAACGGATCGTGGACAGTATATGAAACCTT 494
||||||||.||.||||||||.|||||.||.|||||.||.||.|||||.||
RBAM_011910__ 445 CACTTGCTCTATCAGCTGGATAACGGCTCATGGACTGTGTACGAAACATT 494
BSNT_01978___ 495 CTTGCTAGGCAGAGGAGAATAA 516
.||..|||||.|||||||||||
RBAM_011910__ 495 TTTATTAGGCGGAGGAGAATAA 516
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