Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01963 and RBAM_011760

See Amino acid alignment / Visit BSNT_01963 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:43
# Commandline: needle
#    -asequence dna-align/BSNT_01963___cotY.1.9828.seq
#    -bsequence dna-align/RBAM_011760___cotY.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01963___cotY-RBAM_011760___cotY.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01963___cotY-RBAM_011760___cotY.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01963___cotY
# 2: RBAM_011760___cotY
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 489
# Identity:     394/489 (80.6%)
# Similarity:   394/489 (80.6%)
# Gaps:           6/489 ( 1.2%)
# Score: 1601.5
# 
#
#=======================================

BSNT_01963___      1 ATGAGCTGCGGAAAAACCCATGGCCGGCATGAGAACTGTGTATGCGATGC     50
                     |||||||||||||||..|||||||||..||||.||.||||||||||||||
RBAM_011760__      1 ATGAGCTGCGGAAAACACCATGGCCGAGATGAAAATTGTGTATGCGATGC     50

BSNT_01963___     51 AGTGGAAAAGATTTTAGCAGAGCAGGAGGCAGTTGAGGAACAGTGTCCGA    100
                     |||.||.||||||||||||||.||.|||||.|||||.|||||.||.||||
RBAM_011760__     51 AGTCGAGAAGATTTTAGCAGAACAAGAGGCTGTTGAAGAACAATGCCCGA    100

BSNT_01963___    101 CTGGCTGCTATACAAACCTTTTGAATCCGACAATTGCAGGTAAAGACACA    150
                     ||||.||||||||.||.||.||.|..|||||..||.|.||||||||.||.
RBAM_011760__    101 CTGGATGCTATACCAATCTGTTAAGCCCGACGGTTACCGGTAAAGATACC    150

BSNT_01963___    151 ATTCCGTTTCTCTTGTTTGATAAAAAAGGCGGATTGTTCTCCACATTCGG    200
                     ||.|||||||||||||||||||||||||||||.|||||||||||||||||
RBAM_011760__    151 ATCCCGTTTCTCTTGTTTGATAAAAAAGGCGGTTTGTTCTCCACATTCGG    200

BSNT_01963___    201 AAACGTGGGGGGATTTGTGGATGATATGCAATGCTTTGAATCCATTTTCT    250
                     .|||||.||.|||||||.||||||.|..||.|||||.||.||.|||||||
RBAM_011760__    201 GAACGTCGGAGGATTTGCGGATGACAGCCAGTGCTTCGAGTCTATTTTCT    250

BSNT_01963___    251 TCCGCGTTGAAAAATTATGCGACTGCTGCGCAACACTGTCTATTTTACGC    300
                     ||||.|..||||.|.|.||.||.|||||||||||.||.||..|.||.|||
RBAM_011760__    251 TCCGGGCAGAAAGAGTTTGTGATTGCTGCGCAACGCTTTCAGTATTGCGC    300

BSNT_01963___    301 CCTGTCGATGTCAAAGGCGATACCTTAAGTGTTTGCCACCCTTGCGACCC    350
                     ||.||.|||||..|.|||||.|||.|.||.||.|||||.|||||.|||||
RBAM_011760__    301 CCCGTAGATGTGCACGGCGACACCCTCAGCGTCTGCCATCCTTGTGACCC    350

BSNT_01963___    351 GGATTTCTTCGGGCTAGAAAAAACAGATTTCTGCATTGAAGTGGATCTCG    400
                     ||||||||||||..||||||||||||||||.|||||||||||.|||||..
RBAM_011760__    351 GGATTTCTTCGGTTTAGAAAAAACAGATTTTTGCATTGAAGTTGATCTGA    400

BSNT_01963___    401 GATGCTTCTGCGCGATTCAGTGCCTGTCACCAGAGCTAGTTGACAGAACA    450
                     |.||||||.||||.|||||.|||||.|||||.|||||.||||||.|..|.
RBAM_011760__    401 GCTGCTTCAGCGCCATTCAATGCCTTTCACCGGAGCTTGTTGACCGGCCT    450

BSNT_01963___    451 TCGCCTCACAAAGATAAAAAGCATCATCACAATGGATAA    489
                     ..|||.||||||||.||||||||||      |.|||||.
RBAM_011760__    451 GAGCCGCACAAAGAGAAAAAGCATC------ACGGATAG    483


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