Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01961 and RBAM_011750
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:43
# Commandline: needle
# -asequence dna-align/BSNT_01961___cotZ.1.9828.seq
# -bsequence dna-align/RBAM_011750___cotZ.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01961___cotZ-RBAM_011750___cotZ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01961___cotZ-RBAM_011750___cotZ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01961___cotZ
# 2: RBAM_011750___cotZ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 465
# Identity: 337/465 (72.5%)
# Similarity: 337/465 (72.5%)
# Gaps: 36/465 ( 7.7%)
# Score: 1213.5
#
#
#=======================================
BSNT_01961___ 1 ATGAGCCAGAAAACATCAAGCTGCGTGCGTGAAGCTGTAGAAAATATTGA 50
||||||.||.|.|||.||..|||.|||||||||||.||||||||||||||
RBAM_011750__ 1 ATGAGCAAGCATACAACATACTGTGTGCGTGAAGCGGTAGAAAATATTGA 50
BSNT_01961___ 51 AGATCTGCAAAACGCTGTTGAAGAAGACTGCCCGACCGGCTGCCACTCTA 100
|||.||||||||.||.||.||.|||||.||||||.||||.|||.|.||.|
RBAM_011750__ 51 AGACCTGCAAAATGCGGTCGAGGAAGATTGCCCGGCCGGATGCTATTCCA 100
BSNT_01961___ 101 AGCTTTTATCTGTAAGCC-----ATTCGTTAGGCGACACAGTGCCTTTTG 145
|.|||||||| ||| .|||.||||||||.||||||||.||||
RBAM_011750__ 101 ACCTTTTATC-----GCCGGGTTTTTCATTAGGCGATACAGTGCCGTTTG 145
BSNT_01961___ 146 CAATATTTACATCAAAATCAACGCCATTAGTCGCCTTCGGAAATGTCGGC 195
...|.||.||.||.||||||.|.||.||...|||.|||||||||||||||
RBAM_011750__ 146 TGCTTTTCACTTCTAAATCATCACCGTTTACCGCATTCGGAAATGTCGGC 195
BSNT_01961___ 196 GAACTCGATAACGGCCCTTGCTTTAATACAGTATTTTTCAGGGTCGAAAG 245
||.||.|||||||||||.||||||||.||.||.||||||||.||.|||||
RBAM_011750__ 196 GAGCTGGATAACGGCCCGTGCTTTAACACCGTTTTTTTCAGAGTTGAAAG 245
BSNT_01961___ 246 AGTGCATGGAAGCTGCGCAACA------CTGTCATTATTAATCGCATTTG 289
.||...||...||||.||.||| ||| .||||| ||.||||
RBAM_011750__ 246 GGTCTGTGACGGCTGTGCCACATTAAGCCTG--CTTATT----GCTTTTG 289
BSNT_01961___ 290 ACGAACACAAACACATTTTGGACTTCACCGATAAAGATACGGTGTGTGAA 339
||||.||.||.||||||.|.||.||.||.|||||||||.|..|.||.||.
RBAM_011750__ 290 ACGAGCATAAGCACATTCTTGATTTTACAGATAAAGATTCTCTCTGCGAT 339
BSNT_01961___ 340 GTGTTCCGACTCGAAAAAACGAACTACTGTATTGAAGTTGA----CTTAG 385
||.|||||..|.|||||||||.||||.||..|||||||.|| |.||
RBAM_011750__ 340 GTATTCCGTTTAGAAAAAACGCACTATTGCGTTGAAGTCGATCTCCATA- 388
BSNT_01961___ 386 ACTGCTTCTGCGCAATCAACTGCTTAAATCCTCGATTAATCAATCGTACA 435
||||||||||.|||||.|||.|.||.||..||.|.|||||.||.|||
RBAM_011750__ 389 ---GCTTCTGCGCCATCAATTGCCTGAACCCGAGACTGATCAACCGCACA 435
BSNT_01961___ 436 CATCATCAGCATTAA 450
||| || ||||
RBAM_011750__ 436 CAT--TC----TTAA 444
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