Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01954 and RBAM_011710
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:42
# Commandline: needle
# -asequence dna-align/BSNT_01954___thiF.1.9828.seq
# -bsequence dna-align/RBAM_011710___thiF.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01954___thiF-RBAM_011710___thiF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01954___thiF-RBAM_011710___thiF.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01954___thiF
# 2: RBAM_011710___thiF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1049
# Identity: 758/1049 (72.3%)
# Similarity: 758/1049 (72.3%)
# Gaps: 76/1049 ( 7.2%)
# Score: 2721.0
#
#
#=======================================
BSNT_01954___ 1 ATGACGGGCAGGTATTCAAGGCAGGAGCTGTTTGCTCCGATCGGCCCATC 50
|||||||.|||.|||||.||.||||||||||||...||||||||.||.||
RBAM_011710__ 1 ATGACGGACAGATATTCCAGACAGGAGCTGTTTCAGCCGATCGGTCCCTC 50
BSNT_01954___ 51 CGGCCAGAAAAAATTGAAAGAAGCGCGC-----------GCCGTGATTAT 89
|||||| |.||||||.| | |||||||||||
RBAM_011710__ 51 CGGCCA----------AGAGAAGCTC-CGGTCGTCTCATGCCGTGATTAT 89
BSNT_01954___ 90 CGGCGCCGGCGCGCTCGGAACAGCCAGTGCAGAAATGCTGGTGAGAGCGG 139
||||||.||.|||||.||.||.||.|||||.||.|||||.||.|||||.|
RBAM_011710__ 90 CGGCGCGGGTGCGCTTGGGACGGCAAGTGCGGAGATGCTTGTCAGAGCAG 139
BSNT_01954___ 140 GAGTCGGCCATGTGAAAATTGCCGACAGAGATTATGTTGAATGGAGCAAC 189
|.|||||..|.||.|..||.||.||||||||||||||.||.|||||.||.
RBAM_011710__ 140 GGGTCGGGAAGGTAACGATCGCTGACAGAGATTATGTGGAGTGGAGTAAT 189
BSNT_01954___ 190 CTCCAGCGCCAGCAGCTTTATACAGAAGATGATGTCAAAAAAGAAATGCC 239
|||||||||||||||||||||||.|||||.|||||||.|.|.||||||||
RBAM_011710__ 190 CTCCAGCGCCAGCAGCTTTATACCGAAGACGATGTCAGACAGGAAATGCC 239
BSNT_01954___ 240 GAAAGCAGCCGCTGCGGAGCGCCATCTCCGTTCGATTAACAGCGATGTTG 289
||||||.||.||.||.||....|..||.||.||.||.||.||.|||||.|
RBAM_011710__ 240 GAAAGCCGCGGCGGCTGAAAAACGGCTTCGATCTATAAATAGTGATGTAG 289
BSNT_01954___ 290 ATGT-GACCGGCCTTGTCATGGATGTGACAGCAGAAAATATCTTCGAGC- 337
|.|| || .||..|||||||||||||.||.||.||||| ||..|
RBAM_011710__ 290 AGGTCGA-GGGATTTGTCATGGATGTCACTGCGGAAAA------CGCACC 332
BSNT_01954___ 338 -----TGATTAGGGATGCATCGATTATTGTGGATGCGGCTGATAATTTTG 382
|||||.|.|..||.||..|.||.||||||||.|||||.||.||||
RBAM_011710__ 333 CGGATTGATTCGTGGCGCCTCCCTCATCGTGGATGCCGCTGACAACTTTG 382
BSNT_01954___ 383 AAACCCGCCTGATCGTAAATGATGCTGCGGTAAAGGAAGGGATTCCTTTT 432
||||..|.|||||.||.||||||||.||.|||.||.||||||||||.|||
RBAM_011710__ 383 AAACGAGGCTGATTGTGAATGATGCGGCTGTACAGAAAGGGATTCCCTTT 432
BSNT_01954___ 433 CTTTACGGTGCCTGTGTAGGGAGCTACGGCCTCACCTTTACCGTGGTGCC 482
||.|||||.||||||||.||.||||||||.|||.|.||||||||..|.||
RBAM_011710__ 433 CTGTACGGCGCCTGTGTCGGCAGCTACGGGCTCTCTTTTACCGTCATTCC 482
BSNT_01954___ 483 GGGT-TCTACTCCTTGCCTGCATTGCTTGCTCGATACACTTCCGATTGGC 531
.||| || ||.||.|||||.||.||..||||.||.|||.|.||..|.|||
RBAM_011710__ 483 CGGTGTC-ACGCCGTGCCTTCACTGTCTGCTTGAGACATTGCCTTTAGGC 531
BSNT_01954___ 532 GGAGCAACATGTGACACAGCCGGCATCATCAGTCCGGCTGTTTTGCAGGT 581
||....|||||.||.||.||.||.||||||||.||||||||.||||||..
RBAM_011710__ 532 GGTATGACATGCGATACGGCGGGAATCATCAGCCCGGCTGTATTGCAGAC 581
BSNT_01954___ 582 AGCAGTCTTTCAGGTAACAGATGCACTGAAGCTGCTGACGGGAGAGGAGT 631
.||.||.|||||||.|.|||||||.|||||||||.|.|||||.|
RBAM_011710__ 582 GGCCGTTTTTCAGGCAGCAGATGCGCTGAAGCTGTTAACGGGCG------ 625
BSNT_01954___ 632 G------CGAGCCGATG--CTGCGCTCCTTTGATTTGTGGAAAAATGAGC 673
| ||||| ||| ||.||.||.||||||||.|||||||||||.|
RBAM_011710__ 626 GATCTATCGAGC--ATGTTCTCCGTTCTTTTGATTTATGGAAAAATGAAC 673
BSNT_01954___ 674 GGTCGGAAGTGAGAGCGGCCAGTCTCAAACATGAC----GCATGCCCAAG 719
||||.|||.|.|..|..|||.||||.|| |.| |..||||||||
RBAM_011710__ 674 GGTCAGAAATAAACGTCGCCCGTCTTAA----GTCGGCTGATTGCCCAAG 719
BSNT_01954___ 720 CTGTGGCACAAAGGATTTTCCGTTTTTGTCATATGAAAATCAAACAAAAG 769
|||.|||||.||.||||.|||||||||.||.|||||||||||.|||||||
RBAM_011710__ 720 CTGCGGCACGAACGATTATCCGTTTTTATCCTATGAAAATCAGACAAAAG 769
BSNT_01954___ 770 CGGCTGTATTGTGCGGCAGGAACACGGTGCAGATCAGATC----ATCTAT 815
||||.||..|||||||..||||||||||||||||||||.| ||||.|
RBAM_011710__ 770 CGGCGGTTCTGTGCGGGCGGAACACGGTGCAGATCAGAGCGGGGATCTCT 819
BSNT_01954___ 816 TACGAAAGAAGCG---GATCTTGAAGCGCTTGCCGCTCAGCTGAGGCAGG 862
|||..| |||||..||...|||||.|..|||||.||.|.|.
RBAM_011710__ 820 -------GAACAGTTTGATCTGCAAAAACTTGCGGGACAGCTCAGACGGA 862
BSNT_01954___ 863 CCGGGCTTGAAGTAGCTGCGAACCCGTATTTAATTTCCTGCCGCTCGGAT 912
|.||||||||.||..|.||.|||||||||||||||||.|...||...||.
RBAM_011710__ 863 CAGGGCTTGATGTTTCAGCCAACCCGTATTTAATTTCGTTTTGCAAAGAC 912
BSNT_01954___ 913 GATATGAAAATGGTGCTGTTCCGGGACGGCAGAGCTTTGATCCATGGAAC 962
.||.|.||.|||||.|||||.||.|||||||||||.||.||.||.||.||
RBAM_011710__ 913 AATTTCAAGATGGTACTGTTTCGTGACGGCAGAGCATTAATACACGGCAC 962
BSNT_01954___ 963 AAATGATATTGCCCGGGCAAAATCCATTTATCATAAATGGATTGGGTAA 1011
||.||||||...|.|.||.||||||.||||||||||||||||.||.|||
RBAM_011710__ 963 AAGTGATATCAGCAGAGCGAAATCCTTTTATCATAAATGGATCGGATAA 1011
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