Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01950 and RBAM_011680
See
Amino acid alignment /
Visit
BSNT_01950 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:42
# Commandline: needle
# -asequence dna-align/BSNT_01950___goxB.1.9828.seq
# -bsequence dna-align/RBAM_011680___goxB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01950___goxB-RBAM_011680___goxB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01950___goxB-RBAM_011680___goxB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01950___goxB
# 2: RBAM_011680___goxB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1149
# Identity: 797/1149 (69.4%)
# Similarity: 797/1149 (69.4%)
# Gaps: 78/1149 ( 6.8%)
# Score: 2641.0
#
#
#=======================================
BSNT_01950___ 1 ATGAAAAGGCATTATGAAGCAGTGGTGATTGGAGGCGGAATGATCGGTTC 50
|||||.|.|||.|||||..|||.||||||.||.||||||||.|||||.|.
RBAM_011680__ 1 ATGAAGAAGCACTATGATACAGCGGTGATCGGCGGCGGAATTATCGGGTG 50
BSNT_01950___ 51 CGCGATTGCTTATTATTTGGCAAAGGAAAACAAAAGCACCGCA------- 93
|||.|||.|||||.|..||||.||| .|||.|||
RBAM_011680__ 51 CGCCATTTCTTATGAGCTGGCGAAG----------ACACAGCAGAAGGTT 90
BSNT_01950___ 94 ---TTGTTTGAAAGCGGAACAATGGGCGGCAGAACGACAAGTGCCGCTGC 140
|||.|||||..||||..|.|.|||.|.|.|||||||||.||.||.||
RBAM_011680__ 91 GTCTTGCTTGAAGCCGGAGAAGTCGGCCGAAAAACGACAAGCGCTGCCGC 140
BSNT_01950___ 141 CGGAATGCTGGGCGCCCATGCCGAATGCGAAGAACGTGACGCGTTTTTTG 190
.||||||||||||||.|||||.|||||.|||.|.||.||.||||||||||
RBAM_011680__ 141 GGGAATGCTGGGCGCTCATGCGGAATGTGAAAACCGGGATGCGTTTTTTG 190
BSNT_01950___ 191 ATTTCGCCATGCACAGTCAGCGTCTGTACAAA------GGTCTTGGAGAA 234
||||.||||||||||||||..|.|||||..|| ||.| ||
RBAM_011680__ 191 ATTTTGCCATGCACAGTCAAAGGCTGTATGAACCGGCGGGGC------AA 234
BSNT_01950___ 235 GAGCTTTATGCATTATCCGGTGTGGATATCAGGCAGCATAACGGCGGTAT 284
||||||.|.|.|...|.|||..|.||.|||||||..|||||||||||.||
RBAM_011680__ 235 GAGCTTGAGGAAGCTTGCGGCATTGACATCAGGCGCCATAACGGCGGAAT 284
BSNT_01950___ 285 GTTTAAGCTTGCATTTTCTGAAGAAGATGT--GCTG-CAGCTGAGACAGA 331
|.||||.||.||.|.|.|.|||||||||.| .||| |..|.|| |||
RBAM_011680__ 285 GCTTAAACTGGCGTATACCGAAGAAGATATCGCCTGTCTACGGA---AGA 331
BSNT_01950___ 332 TGGACGATTTGGACTCTGTCAGCTGGTATTCAAAAGAAGAGGTGTTAGAA 381
||||.|||.||...||.||||.||||..||||...|||||.|...|.|||
RBAM_011680__ 332 TGGATGATCTGCCTTCCGTCACCTGGCTTTCAGCGGAAGATGCCCTTGAA 381
BSNT_01950___ 382 AAAGAGCCGTATGCGTCTGGTGACATCTTTGGTGCATCTTTTATTCAGGA 431
||||||||.||.||.||....|||||..|.||.|||..||||||..|.||
RBAM_011680__ 382 AAAGAGCCTTACGCTTCAAAAGACATTCTCGGCGCAAGTTTTATAAAAGA 431
BSNT_01950___ 432 TGATGTGCATGTGGAGCCTTATTTTGTTTGCAAGGCATATGTGAAAGCAG 481
.|||||.|||||.||.||.||.|.|||.|||||.||.||||..||||.||
RBAM_011680__ 432 CGATGTCCATGTCGAACCGTACTATGTCTGCAAAGCGTATGCAAAAGGAG 481
BSNT_01950___ 482 CAAAAATGC------TTGGGGCGGAGATTTTTGAGCATACGCCTGT--CC 523
| || .|||.||.||.||.|.|||||||||.|..|| ||
RBAM_011680__ 482 C------GCGGCGCTATGGCGCTGATATATATGAGCATACACAAGTCACC 525
BSNT_01950___ 524 TGCATGTCGAACG--TG-ACGGTGAAGCCCT-GTCCATCAAGACCCCTAG 569
|.| ||..|||| || ||||.||| | .|.|||||..||..|..|
RBAM_011680__ 526 TCC--GTAAAACGGATGAACGGAGAA----TATTGCATCACAACGTCCGG 569
BSNT_01950___ 570 CGGAGACGTATGGGCTAATCATGTTGTCGTTGCCAGCGGGGTGTGGAGCG 619
|||.||.||.|..|||.|..|.||.|..|||||.|||||.||.|||||||
RBAM_011680__ 570 CGGGGATGTTTATGCTGACAAAGTCGCAGTTGCAAGCGGTGTATGGAGCG 619
BSNT_01950___ 620 GAATGTTTTTTAAACAGCTTGGACT--GAACAATG-CTTTTCTCCCTGTA 666
|...||||||.|..|||||.|| || |.||| | |||||.|.|||||.
RBAM_011680__ 620 GCCGGTTTTTCAGCCAGCTCGG-CTTGGGACA--GCCTTTTTTTCCTGTG 666
BSNT_01950___ 667 AAAGGGGAGTGCCTGTCCGTTTGGAATGATGATATCCCGCTGACAAAAAC 716
|||||.||.|||||.|||||.||||||||.||||.|||||||||.|||||
RBAM_011680__ 667 AAAGGAGAATGCCTTTCCGTGTGGAATGACGATACCCCGCTGACCAAAAC 716
BSNT_01950___ 717 GCTTTACCATGATCACTGCTATATCGTACCGAGAAAAAGCGGCAAACTGG 766
.|||||.||||||||.||.|||.||||.|||||||||||||||...||.|
RBAM_011680__ 717 CCTTTATCATGATCATTGTTATGTCGTCCCGAGAAAAAGCGGCCGGCTTG 766
BSNT_01950___ 767 TTGTCGGCGCGACAATGAAGCTGGGAGACTGGAGTGAAACACCGGATCTT 816
|..|||||||.||.|||||.|..||.||||||||.||.||.||.||..|.
RBAM_011680__ 767 TCATCGGCGCAACGATGAAACACGGCGACTGGAGCGATACGCCTGACATC 816
BSNT_01950___ 817 GGCGGATTGGAATCGGTTATGAAAAAAGCAAAAACGATGCTGCCGGCTAT 866
||.|||.|.||..|.||.||...||||||.|||||.|||||.||.||.||
RBAM_011680__ 817 GGAGGAATTGAGGCCGTCATTGGAAAAGCGAAAACCATGCTTCCTGCCAT 866
BSNT_01950___ 867 ACAGAATATGAAGGTGGATCGTTTTTGGGCGGGACTCCGGCCGGGAACAA 916
..|..|||||||..|.||.||.|||||||||||||||.||||||||||||
RBAM_011680__ 867 CGAACATATGAAAATAGACCGGTTTTGGGCGGGACTCAGGCCGGGAACAA 916
BSNT_01950___ 917 AGGATGGAAAACCGTACATCGGCAGACATCCTGAGGACAGCCGTATTTTA 966
..||.|||||.||||..|||||..|.||||||||.||||||.|.||..|.
RBAM_011680__ 917 GAGACGGAAAGCCGTTTATCGGGCGGCATCCTGAAGACAGCGGCATCATC 966
BSNT_01950___ 967 TTTGCGGCGGGCCATTTCAGAAATGGGATCCTGCTTGCTCCCGCAACAGG 1016
||.||.||.||||||||..|.||.||.||||||.|.||.||.||||| ||
RBAM_011680__ 967 TTCGCCGCCGGCCATTTTCGGAACGGCATCCTGTTGGCGCCGGCAAC-GG 1015
BSNT_01950___ 1017 CGCTTTGA-----TCAGTGATCTCATCATGAATAAAGAGGTCAACCAAGA 1061
| ||| |..|.|||.|.|||.||.|.|.|.||.|.||.||.||
RBAM_011680__ 1016 C----TGAAATGGTGCGGGATATGATCCTGGAAAGACAGATTAAACAGGA 1061
BSNT_01950___ 1062 CTGGCTGCACGCATTCCGAATTGATCGCAAGGAGGCGGTTCAGATATGA 1110
.|||....|.||.||.||||||||||||||||||||.|||||.||||||
RBAM_011680__ 1062 ATGGGAAGAAGCGTTTCGAATTGATCGCAAGGAGGCTGTTCATATATGA 1110
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.