Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01949 and RBAM_011670
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:42
# Commandline: needle
# -asequence dna-align/BSNT_01949___tenI.1.9828.seq
# -bsequence dna-align/RBAM_011670___tenI.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01949___tenI-RBAM_011670___tenI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01949___tenI-RBAM_011670___tenI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01949___tenI
# 2: RBAM_011670___tenI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 652
# Identity: 441/652 (67.6%)
# Similarity: 441/652 (67.6%)
# Gaps: 68/652 (10.4%)
# Score: 1371.0
#
#
#=======================================
BSNT_01949___ 1 GTGGAGCTTCACGCCATAACGGATGACAGCAAGCCGGTAGAAGAGCTAG- 49
.|||||||.|||||..||||.|||.|..||||.||.||.|..|||||.|
RBAM_011670__ 1 TTGGAGCTGCACGCGGTAACTGATAATCGCAAACCCGTTGCCGAGCTGGC 50
BSNT_01949___ 50 CGAGAACCATCATTTCGATTCAGAATGAAGTTGATTTTATTCACATTCGG 99
||||.| .||..|||||||||||...|||||....|||||.||.||.||.
RBAM_011670__ 51 CGAGGA-TATTCTTTCGATTCAGCGCGAAGTAAGCTTTATCCATATCCGT 99
BSNT_01949___ 100 GAACGCTCAAAATCGGCGGCGGATATTCTGAAAC-TGCTCGAGCTTAT-- 146
||.||....|||.|.||||..||.|| | ||| |||||.|
RBAM_011670__ 100 GAGCGGGATAAAACAGCGGGAGAGAT-------CATGC---AGCTTTTGT 139
BSNT_01949___ 147 ---TTTTGAA----GGCGGTATAGATAA--ACGAAAACTGGT----GATG 183
||||||| ||||||...||||| || |||.||.| .|||
RBAM_011670__ 140 CCCTTTTGAAAAAGGGCGGTGCGGATAAGGAC--AAATTGATCATCAATG 187
BSNT_01949___ 184 AACGGGCGCGTGGATATTGCACTTTTCTCTACTATTCACCGCGTGCAGCT 233
|..|||| ||||||.||.|||||..|.|.|||.|||||.||.|||||
RBAM_011670__ 188 ACAGGGC----GGATATCGCGCTTTTTGCCAATATACACCGTGTTCAGCT 233
BSNT_01949___ 234 GCCAAGCGGCAGCTTTTCACCG--AAGCAGGTCAGAGCCAGATTTCCACA 281
.||...|.||||||||| ||| ||||||||..||..|||||||||.||
RBAM_011670__ 234 TCCGTCCCGCAGCTTTT--CCGTAAAGCAGGTGCGAAGCAGATTTCCCCA 281
BSNT_01949___ 282 CCTTCATATCGGGAGGTCGGTGCATTCACTGGAGGAAGCGGTTCAAGCAG 331
.|||||||||||..|.|||||.|||||.|||.|.|||||..|.|||||.|
RBAM_011670__ 282 TCTTCATATCGGACGTTCGGTTCATTCGCTGAAAGAAGCCATCCAAGCTG 331
BSNT_01949___ 332 AAAAGGAAGACGCGGACTACGTGCTGTTCGGCCATGTGTTTGAAACGGAT 381
||||||||||.|||||.||.|||.|||||||||||||.||||||||.||.
RBAM_011670__ 332 AAAAGGAAGATGCGGATTATGTGGTGTTCGGCCATGTATTTGAAACCGAA 381
BSNT_01949___ 382 TGCAAAAAGGGTCTTGAAGGCAGAGGAGTATC--TTTGCTGTCAACTATC 429
||.|||.|.||.|||||||..|||| |.||| ..||||.|||...|||
RBAM_011670__ 382 TGTAAACAAGGACTTGAAGCAAGAG--GCATCAGCCTGCTTTCAGAGATC 429
BSNT_01949___ 430 AAACAGC-GGATTTCCATCCCGGTTATAGCCATCGGGGGGATGACGCCGG 478
|||| || .|.||||||||||.||.||.||.|||||.||.|||||.|.|.
RBAM_011670__ 430 AAAC-GCACGCTTTCCATCCCCGTCATCGCAATCGGCGGAATGACACTGC 478
BSNT_01949___ 479 ACAGGTTAAGAGACGTAAAAC-AAGCAGGGG----CAGACGGCATCGCTG 523
|.|.|.|..||.|| || |||||||.| |.|||||.||.||.|
RBAM_011670__ 479 AGACGATCGGACAC-----ACAAAGCAGGCGAAACCGGACGGAATTGCCG 523
BSNT_01949___ 524 TTATGTCAGGAATTTTCTCTTCCGCTG---AGCCCTTGGAAGCAGCCAGA 570
|.||||||||.||.||| ||.|||| |.||...|||.||.||.|.|
RBAM_011670__ 524 TCATGTCAGGTATATTC---TCAGCTGAAAATCCTGAGGAGGCGGCAAAA 570
BSNT_01949___ 571 CGATATTCCCGCAAGCTAAAGGAGATGCGC----TATGAAAAGGCATTAT 616
||.|||.|.|||..|.|||.|||| || ||||||.|.|||.|||
RBAM_011670__ 571 CGGTATGCACGCGCGGTAAGGGAG----GCCGATTATGAAGAAGCACTAT 616
BSNT_01949___ 617 GA 618
||
RBAM_011670__ 617 GA 618
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