Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01948 and RBAM_011660
See
Amino acid alignment /
Visit
BSNT_01948 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:42
# Commandline: needle
# -asequence dna-align/BSNT_01948___tenA.1.9828.seq
# -bsequence dna-align/RBAM_011660___tenA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01948___tenA-RBAM_011660___tenA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01948___tenA-RBAM_011660___tenA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01948___tenA
# 2: RBAM_011660___tenA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 719
# Identity: 556/719 (77.3%)
# Similarity: 556/719 (77.3%)
# Gaps: 16/719 ( 2.2%)
# Score: 2120.5
#
#
#=======================================
BSNT_01948___ 1 ---GTGAAGTTTTCAGAAGAATGCCG-CAGCGCAGCCGCAGAATGGTGGG 46
.|||..|||||.|||||||||.| ||| ||.||.||.||||||||||
RBAM_011660__ 1 ATGATGACATTTTCTGAAGAATGCAGACAG-GCGGCTGCCGAATGGTGGG 49
BSNT_01948___ 47 AGGGGAGCTTTGTCCATCCGTTCGTTCAA--GGAATCGGTGATGGAACGC 94
|.||.||.|||||.||||||||.|| || |||||||||||.||||..|
RBAM_011660__ 50 ACGGAAGTTTTGTTCATCCGTTTGT--AACGGGAATCGGTGACGGAAGCC 97
BSNT_01948___ 95 TTCCGATTGACCGTTTTAAATACTACGTACTTCAGGATTCCTATTATTTA 144
|.|||||.||||||||.|..||.|||||.||.||.||||||||.|||||.
RBAM_011660__ 98 TGCCGATAGACCGTTTCAGCTATTACGTGCTGCAAGATTCCTACTATTTG 147
BSNT_01948___ 145 ACGCATTTTGCAAAGGTGCAGTCATTTGGCGCCTCTTATG-CGAAGGATC 193
||||||||||||||.||.|||.|.||.||||||.|.|||| ||||| .|
RBAM_011660__ 148 ACGCATTTTGCAAAAGTTCAGGCGTTCGGCGCCGCATATGCCGAAG--AC 195
BSNT_01948___ 194 TT-TATACAACGGGGCGGATGGCAAGCCATGCCCAAGGTACATATGAGGC 242
|| |.|||.|||||..|||||||..||||.||.|||||.||||||||.||
RBAM_011660__ 196 TTGTTTACGACGGGCAGGATGGCGGGCCACGCTCAAGGGACATATGAAGC 245
BSNT_01948___ 243 GGAAATGGCGCTTCATCGCGAGTTTGCCGAGCTGTTGGAAATCAGCGAGG 292
||||||||||||.||.|||||||||.|.|||||.||.|..||.|..||.|
RBAM_011660__ 246 GGAAATGGCGCTGCACCGCGAGTTTACGGAGCTTTTAGGGATTACGGAAG 295
BSNT_01948___ 293 AAGAGCGTAAGGCGTTTAAGCCGTCTCCTACAGCGTACTCTTATACATCC 342
||||||||..|||.|||||.|||.|.||.||.||.||.||||||||.||.
RBAM_011660__ 296 AAGAGCGTGCGGCATTTAAACCGGCACCGACCGCCTATTCTTATACGTCT 345
BSNT_01948___ 343 CATATGTACCGTTCGGTTTTGAGCAGGAATTTCGCAGAAATCTTAGCGGC 392
|||||||||.|.|||||..|||||.|.|||||.|.||||||.|||||.||
RBAM_011660__ 346 CATATGTACAGATCGGTGATGAGCGGCAATTTTGGAGAAATATTAGCTGC 395
BSNT_01948___ 393 CCTGCTGCCATGCTACTGGCTTTATTACGAGGTTGGTGAGAAATTGCTGC 442
.||.|||||.||.||.|||||||||||.||.||.||.||..|.||...|.
RBAM_011660__ 396 GCTTCTGCCCTGTTATTGGCTTTATTATGAAGTCGGCGAACACTTAAAGG 445
BSNT_01948___ 443 ATTGCGATCCTGGGCATCCGATTTATCAAAAGTGGATTGGGACGTACGGC 492
|.|||.|.||.|.|||||||||||||.||||.|||||.||.||.||||||
RBAM_011660__ 446 AGTGCAAACCGGAGCATCCGATTTATGAAAAATGGATCGGTACATACGGC 495
BSNT_01948___ 493 GGTGACTGGTTTAGACAACAGGTTGAGGAGCAAATCAACCGCTTTGATGA 542
||.||||||||.|||||.||.||.||.||.||.||||.|||.|||||.||
RBAM_011660__ 496 GGAGACTGGTTCAGACAGCAAGTCGAAGAACAGATCAGCCGTTTTGACGA 545
BSNT_01948___ 543 GCTGGCGGAAAACAGCACGGAGGAAGTGCGTGCCAAGATGAAAGAGAATT 592
|.|.||.|||||||||||.|||||..|.||.||.||.|||||||||||||
RBAM_011660__ 546 GATTGCTGAAAACAGCACAGAGGACATCCGCGCGAAAATGAAAGAGAATT 595
BSNT_01948___ 593 TTGTCATCTCCAGCTACTATGAATATCAATTTTGGGGAATGGCCTATCGA 642
||||.||.||.|||||.|||||||||||||||||||||||||||||||.|
RBAM_011660__ 596 TTGTGATTTCAAGCTATTATGAATATCAATTTTGGGGAATGGCCTATCAA 645
BSNT_01948___ 643 AAAGAAGGCTGGTCTGACAGCGCCATAAAAGAGGTGGAGGAATGTGGAGC 692
||||||||||||||.||.|..|.|..||||||||||||....|.||||||
RBAM_011660__ 646 AAAGAAGGCTGGTCCGAGAAGGGCGGAAAAGAGGTGGAATCTTTTGGAGC 695
BSNT_01948___ 693 TTCACGCCATAACGGATGA 711
|.|||||..||||.||
RBAM_011660__ 696 TGCACGCGGTAACTGA--- 711
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.