Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01923 and RBAM_011500

See Amino acid alignment / Visit BSNT_01923 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:40
# Commandline: needle
#    -asequence dna-align/BSNT_01923___spxA.1.9828.seq
#    -bsequence dna-align/RBAM_011500___spxA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01923___spxA-RBAM_011500___spxA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01923___spxA-RBAM_011500___spxA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01923___spxA
# 2: RBAM_011500___spxA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 396
# Identity:     340/396 (85.9%)
# Similarity:   340/396 (85.9%)
# Gaps:           0/396 ( 0.0%)
# Score: 1476.0
# 
#
#=======================================

BSNT_01923___      1 ATGGTTACACTATACACATCACCAAGCTGTACTTCATGCAGAAAGGCGAG     50
                     |||||||||.|||||||||||||.||||||||.|||||||||||.||.||
RBAM_011500__      1 ATGGTTACATTATACACATCACCTAGCTGTACGTCATGCAGAAAAGCAAG     50

BSNT_01923___     51 AGCGTGGCTCGAGGAGCACGATATTCCATTTGTAGAAAGAAACATTTTCT    100
                     |||.|||||.||.||||||||.|||||.||||||||.|||||||||||||
RBAM_011500__     51 AGCTTGGCTTGAAGAGCACGAGATTCCGTTTGTAGAGAGAAACATTTTCT    100

BSNT_01923___    101 CTGAACCTTTATCAATTGATGAAATAAAACAAATTCTTCGAATGACTGAG    150
                     |.||.||.||||||||||||||.||.||.||.|||||.||.||||||||.
RBAM_011500__    101 CCGAGCCGTTATCAATTGATGAGATCAAGCAGATTCTGCGTATGACTGAA    150

BSNT_01923___    151 GATGGAACAGATGAAATCATCTCAACCCGTTCAAAAGTATTCCAAAAACT    200
                     ||.||.||.||||||||.|||||.||||||||.|||||||||||.|||||
RBAM_011500__    151 GACGGTACGGATGAAATTATCTCTACCCGTTCTAAAGTATTCCAGAAACT    200

BSNT_01923___    201 GAATGTGAACGTTGAATCTATGCCGCTGCAAGATTTGTACCGCTTGATCA    250
                     |||.||.||.|||||||||||||||||.|||||.||.||....|||||||
RBAM_011500__    201 GAACGTAAATGTTGAATCTATGCCGCTTCAAGACTTATATACTTTGATCA    250

BSNT_01923___    251 ACGAGCATCCAGGGTTGCTTCGCCGTCCGATCATCATTGACGAAAAACGT    300
                     |.||||||||.||..||||.||||||||||||||||||||.|||||||||
RBAM_011500__    251 ATGAGCATCCGGGACTGCTCCGCCGTCCGATCATCATTGATGAAAAACGT    300

BSNT_01923___    301 TTGCAGGTAGGATATAACGAAGACGAAATCAGACGTTTCCTGCCAAGAAA    350
                     .||||.||.||.|||||||||||.|||||||||||.||||||||||||||
RBAM_011500__    301 CTGCAAGTCGGCTATAACGAAGATGAAATCAGACGATTCCTGCCAAGAAA    350

BSNT_01923___    351 AGTTCGCTCTTTCCAATTAAGAGAAGCACAGCGTTTGGCAAACTAA    396
                     |||.||.|||||||||||||||||||||||||||.|.||.||||.|
RBAM_011500__    351 AGTGCGTTCTTTCCAATTAAGAGAAGCACAGCGTCTTGCCAACTGA    396


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