Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01923 and RBAM_011500
See
Amino acid alignment /
Visit
BSNT_01923 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:40
# Commandline: needle
# -asequence dna-align/BSNT_01923___spxA.1.9828.seq
# -bsequence dna-align/RBAM_011500___spxA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01923___spxA-RBAM_011500___spxA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01923___spxA-RBAM_011500___spxA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01923___spxA
# 2: RBAM_011500___spxA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 396
# Identity: 340/396 (85.9%)
# Similarity: 340/396 (85.9%)
# Gaps: 0/396 ( 0.0%)
# Score: 1476.0
#
#
#=======================================
BSNT_01923___ 1 ATGGTTACACTATACACATCACCAAGCTGTACTTCATGCAGAAAGGCGAG 50
|||||||||.|||||||||||||.||||||||.|||||||||||.||.||
RBAM_011500__ 1 ATGGTTACATTATACACATCACCTAGCTGTACGTCATGCAGAAAAGCAAG 50
BSNT_01923___ 51 AGCGTGGCTCGAGGAGCACGATATTCCATTTGTAGAAAGAAACATTTTCT 100
|||.|||||.||.||||||||.|||||.||||||||.|||||||||||||
RBAM_011500__ 51 AGCTTGGCTTGAAGAGCACGAGATTCCGTTTGTAGAGAGAAACATTTTCT 100
BSNT_01923___ 101 CTGAACCTTTATCAATTGATGAAATAAAACAAATTCTTCGAATGACTGAG 150
|.||.||.||||||||||||||.||.||.||.|||||.||.||||||||.
RBAM_011500__ 101 CCGAGCCGTTATCAATTGATGAGATCAAGCAGATTCTGCGTATGACTGAA 150
BSNT_01923___ 151 GATGGAACAGATGAAATCATCTCAACCCGTTCAAAAGTATTCCAAAAACT 200
||.||.||.||||||||.|||||.||||||||.|||||||||||.|||||
RBAM_011500__ 151 GACGGTACGGATGAAATTATCTCTACCCGTTCTAAAGTATTCCAGAAACT 200
BSNT_01923___ 201 GAATGTGAACGTTGAATCTATGCCGCTGCAAGATTTGTACCGCTTGATCA 250
|||.||.||.|||||||||||||||||.|||||.||.||....|||||||
RBAM_011500__ 201 GAACGTAAATGTTGAATCTATGCCGCTTCAAGACTTATATACTTTGATCA 250
BSNT_01923___ 251 ACGAGCATCCAGGGTTGCTTCGCCGTCCGATCATCATTGACGAAAAACGT 300
|.||||||||.||..||||.||||||||||||||||||||.|||||||||
RBAM_011500__ 251 ATGAGCATCCGGGACTGCTCCGCCGTCCGATCATCATTGATGAAAAACGT 300
BSNT_01923___ 301 TTGCAGGTAGGATATAACGAAGACGAAATCAGACGTTTCCTGCCAAGAAA 350
.||||.||.||.|||||||||||.|||||||||||.||||||||||||||
RBAM_011500__ 301 CTGCAAGTCGGCTATAACGAAGATGAAATCAGACGATTCCTGCCAAGAAA 350
BSNT_01923___ 351 AGTTCGCTCTTTCCAATTAAGAGAAGCACAGCGTTTGGCAAACTAA 396
|||.||.|||||||||||||||||||||||||||.|.||.||||.|
RBAM_011500__ 351 AGTGCGTTCTTTCCAATTAAGAGAAGCACAGCGTCTTGCCAACTGA 396
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.