Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01921 and RBAM_011490

See Amino acid alignment / Visit BSNT_01921 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:40
# Commandline: needle
#    -asequence dna-align/BSNT_01921___yjbC.1.9828.seq
#    -bsequence dna-align/RBAM_011490___yjbC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01921___yjbC-RBAM_011490___yjbC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01921___yjbC-RBAM_011490___yjbC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01921___yjbC
# 2: RBAM_011490___yjbC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 579
# Identity:     490/579 (84.6%)
# Similarity:   490/579 (84.6%)
# Gaps:           0/579 ( 0.0%)
# Score: 2094.0
# 
#
#=======================================

BSNT_01921___      1 ATGAACTGGTATGAAAAGCTTAGCGAGTATTTTCCAATTGAAGAAATGAA     50
                     |||||||||||.||||||||.||.||.||||||||.||||||||||||||
RBAM_011490__      1 ATGAACTGGTACGAAAAGCTGAGTGAATATTTTCCGATTGAAGAAATGAA     50

BSNT_01921___     51 ATCAAAAGCGCATATGGAAGCTCTTCTGAAAGAGCGAAGCGATATTTATC    100
                     ||||||||||||||||||||||||..|.||.||||.|||||||.||||||
RBAM_011490__     51 ATCAAAAGCGCATATGGAAGCTCTGTTAAAGGAGCAAAGCGATGTTTATC    100

BSNT_01921___    101 ATAAAGATGAAGGCAAACATCATATTTTAATGTTTGCGGAATTCGATTCT    150
                     |||||||.||.||..|..|.||..|..|.||||.|||||||||.||.|||
RBAM_011490__    101 ATAAAGAAGAGGGGCAGTACCACGTGCTGATGTATGCGGAATTTGACTCT    150

BSNT_01921___    151 TTTATCTTCGTTGATTATCTGTATGTGTCTAAGGATGCAAGAGGGCAGGG    200
                     ||.|||||..|||||||.||||.||||||.|||.|..|.|||||.||.||
RBAM_011490__    151 TTCATCTTTATTGATTACCTGTTTGTGTCAAAGAAATCCAGAGGACAAGG    200

BSNT_01921___    201 GCTTGGCGGCAAATTGATCGCGAAGCTGAAAAAGAAAAATAAGCCCATAT    250
                     .||.||..||||..||||||..|.|||||||||||||||.|||||.||..
RBAM_011490__    201 CCTCGGAAGCAAGCTGATCGGCAGGCTGAAAAAGAAAAACAAGCCGATTC    250

BSNT_01921___    251 TGCTCGAGGTGGAACCTGTGGATGAAGATGATACTGATACAGAAAAACGC    300
                     ||||.||||||||.|||||.||.||.|||||.||.||||||.|.||||||
RBAM_011490__    251 TGCTTGAGGTGGAGCCTGTTGACGAGGATGACACGGATACACAGAAACGC    300

BSNT_01921___    301 CTGAGGTTTTATCAAAGAGAGCATTTCAAGCATGCTCAGTCAATTGGGTA    350
                     .||.|.||||||||||||||||||||||||||.||.||||||||.|||||
RBAM_011490__    301 TTGCGTTTTTATCAAAGAGAGCATTTCAAGCACGCGCAGTCAATCGGGTA    350

BSNT_01921___    351 CCGGCGCCGGTCATTGGCTACGAATGAAGTAAACAAGATGGAGATTCTGT    400
                     .|||||||||||||||||||||||||||||.|||||.|||||||||||||
RBAM_011490__    351 TCGGCGCCGGTCATTGGCTACGAATGAAGTGAACAAAATGGAGATTCTGT    400

BSNT_01921___    401 ACTGGTCACCAAAAACAGAATCAGAAGAAGAAATTCTTGAAGCCATGAAA    450
                     ||||||||||.||.||.|||||||||||||||||..|||||||.||||||
RBAM_011490__    401 ACTGGTCACCTAAGACGGAATCAGAAGAAGAAATGTTTGAAGCAATGAAA    450

BSNT_01921___    451 CAGACATATGAAAACATTCATACTTATAAAGACGAGAAATGGTACGGGGA    500
                     ||||||||||||||||||||.|||||||||||.||.|||||||||||.||
RBAM_011490__    451 CAGACATATGAAAACATTCACACTTATAAAGATGAAAAATGGTACGGAGA    500

BSNT_01921___    501 ATCGTACGAAAAAACGGATGAAGTCCTGAAACTCATTGATGAAGAAAAAC    550
                     |||.||||||||||||||||||||.||.|||.||||||||||..||||||
RBAM_011490__    501 ATCATACGAAAAAACGGATGAAGTTCTCAAAGTCATTGATGAGAAAAAAC    550

BSNT_01921___    551 AAAAAAATATTTTCGATCAGTTAAGCTAA    579
                     .||||||.||||||||||||.|.||||||
RBAM_011490__    551 GAAAAAACATTTTCGATCAGCTGAGCTAA    579


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