Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01918 and RBAM_011470
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:40
# Commandline: needle
# -asequence dna-align/BSNT_01918___oppF.1.9828.seq
# -bsequence dna-align/RBAM_011470___oppF.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01918___oppF-RBAM_011470___oppF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01918___oppF-RBAM_011470___oppF.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01918___oppF
# 2: RBAM_011470___oppF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 920
# Identity: 766/920 (83.3%)
# Similarity: 766/920 (83.3%)
# Gaps: 4/920 ( 0.4%)
# Score: 3209.0
#
#
#=======================================
BSNT_01918___ 1 TTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCAC 50
.|||||||.||.||..|.|||||||||||.|||||||||||.|||.||||
RBAM_011470__ 1 ATGACTGAGAAGCTTCTCGAAATCAAACACTTAAAACAGCATTTTTTCAC 50
BSNT_01918___ 51 GCCGAGGGGAACGGTTAAGGCTGTAGATGATTTATCATTTGATATCTATA 100
||.||..||||||||.||.||.|||||||||||.|||||||||||.||||
RBAM_011470__ 51 GCAGAAAGGAACGGTAAAAGCCGTAGATGATTTGTCATTTGATATTTATA 100
BSNT_01918___ 101 AAGGTGAAACATTAGGGCTGGTTGGTGAATCTGGCTGCGGTAAATCGACA 150
||||.|||||..|.||.||.||.||.|||||.||||||||||||||.||.
RBAM_011470__ 101 AAGGCGAAACGCTCGGCCTTGTCGGAGAATCAGGCTGCGGTAAATCAACG 150
BSNT_01918___ 151 ACAGGCCGAAGCATTATCCGGCTGTACGAAGCAACCGATGGTGAGGTGCT 200
||.|||||.|||||||||||||||||.||.|||||||..||.||.||.||
RBAM_011470__ 151 ACGGGCCGCAGCATTATCCGGCTGTATGAGGCAACCGGCGGGGAAGTTCT 200
BSNT_01918___ 201 GTTTAACGGTGAAAATGTGCACGGGAGAAAATCGCGGAAAAAGCTGCTGG 250
.||||||||.||||||||.|||||||.||||||.||.||.||||||||||
RBAM_011470__ 201 CTTTAACGGGGAAAATGTCCACGGGAAAAAATCCCGCAAGAAGCTGCTGG 250
BSNT_01918___ 251 AATTCAACCGCAAAATGCAGATGATTTTCCAAGACCCCTATGCATCCCTG 300
|.||.|||||.||||||||||||||||||||.||.||.||.|||||..|.
RBAM_011470__ 251 AGTTTAACCGGAAAATGCAGATGATTTTCCAGGATCCGTACGCATCTTTA 300
BSNT_01918___ 301 AATCCGAGAATGACAGTTGCTGATATTATTGCTGAAGGTCTTGATATTCA 350
|||||||||||||||||.||.||.||||||||.||.||..|.||||||||
RBAM_011470__ 301 AATCCGAGAATGACAGTCGCCGACATTATTGCCGAGGGAATAGATATTCA 350
BSNT_01918___ 351 TAAGCTGGCAAAAACGAAAAAAGAGCGGATGCAGAGGGTTCATGAACTAT 400
....||||||||||||||||||||||||||||||.|||||||.|||||..
RBAM_011470__ 351 CCGCCTGGCAAAAACGAAAAAAGAGCGGATGCAGCGGGTTCACGAACTGC 400
BSNT_01918___ 401 TGGAAACAGTTGGTTTAAACAAGGAACACGCGAACCGCTATCCGCATGAA 450
|||||||.||.||||||||.||.||.|||||.||||||||.|||||||||
RBAM_011470__ 401 TGGAAACGGTCGGTTTAAATAAAGAGCACGCCAACCGCTACCCGCATGAA 450
BSNT_01918___ 451 TTTTCCGGCGGCCAGCGCCAAAGAATCGGGATTGCCAGAGCTCTTGCTGT 500
|||||.|||||.||||||||..|.|||||.||.||||||||.||.||.||
RBAM_011470__ 451 TTTTCGGGCGGACAGCGCCAGCGTATCGGAATCGCCAGAGCGCTGGCGGT 500
BSNT_01918___ 501 TGATCCGGAATTCATTATCGCGGATGAGCCGATTTC--CGCTTTGGATGT 548
|||||||||.||.||.||||||||.||.|||||||| ||||| |||||
RBAM_011470__ 501 TGATCCGGAGTTTATCATCGCGGACGAACCGATTTCGGCGCTT--GATGT 548
BSNT_01918___ 549 ATCCATTCAAGCGCAGGTCGTGAATTTAATGAAAGAACTGCAAAAAGAAA 598
.||||||||.|||||.|||||.|||||||||||||||.||||.|||||||
RBAM_011470__ 549 CTCCATTCAGGCGCAAGTCGTCAATTTAATGAAAGAATTGCAGAAAGAAA 598
BSNT_01918___ 599 AAGGGCTCACATACCTGTTTATTGCCCACGATTTATCGATGGTCAAATAC 648
||||||||||.|||||||||||.|||||.||||||||.||||||||||||
RBAM_011470__ 599 AAGGGCTCACTTACCTGTTTATCGCCCATGATTTATCAATGGTCAAATAC 648
BSNT_01918___ 649 ATCAGTGACCGCATTGGCGTCATGTATTTCGGGAAACTGGTTGAGCTTGC 698
|||||.||.|||||.|||||||||||||||||.|||.||||.||||||||
RBAM_011470__ 649 ATCAGCGATCGCATCGGCGTCATGTATTTCGGAAAATTGGTGGAGCTTGC 698
BSNT_01918___ 699 GCCGGCAGATGAGCTTTATGAAAATCCGCTTCACCCATATACAAAATCAT 748
||||||.|||||||||||.|||||.||||||||||||||.||.|||||||
RBAM_011470__ 699 GCCGGCGGATGAGCTTTACGAAAACCCGCTTCACCCATACACGAAATCAT 748
BSNT_01918___ 749 TGCTTTCTGCGATTCCGCTTCCAGATCCAGACTATGAGAGAAATCGCGTT 798
||||.||.||.||.|||||.||.|||||.||||||||.|||||||||...
RBAM_011470__ 749 TGCTGTCCGCTATCCCGCTCCCTGATCCGGACTATGAAAGAAATCGCACG 798
BSNT_01918___ 799 CGCCAGAAATATGATCCGTCCGTCCATCAATTAAAGGATGGGGAAACGAT 848
||..|||||||.|||||||||.|.|||||..|..|.||.||.||||.|||
RBAM_011470__ 799 CGAAAGAAATACGATCCGTCCATTCATCAGCTGCAAGACGGAGAAAAGAT 848
BSNT_01918___ 849 GGAATTCCGTGAAGTCAAACCGGGACATTTTGTGATGTGCACGGAAGCCG 898
|||||||.|.|||||.|||||||||||||||||.||||||||.||||..|
RBAM_011470__ 849 GGAATTCAGAGAAGTGAAACCGGGACATTTTGTCATGTGCACAGAAGATG 898
BSNT_01918___ 899 AATTTAAAGCTTTTTCATGA 918
||||||||.|.|.|..||.|
RBAM_011470__ 899 AATTTAAAACCTATCTATAA 918
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