Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01917 and RBAM_011460
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:39
# Commandline: needle
# -asequence dna-align/BSNT_01917___oppD.1.9828.seq
# -bsequence dna-align/RBAM_011460___oppD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01917___oppD-RBAM_011460___oppD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01917___oppD-RBAM_011460___oppD.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01917___oppD
# 2: RBAM_011460___oppD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1081
# Identity: 861/1081 (79.6%)
# Similarity: 861/1081 (79.6%)
# Gaps: 17/1081 ( 1.6%)
# Score: 3458.0
#
#
#=======================================
BSNT_01917___ 1 GTGACACGCCTATTAGAAGTAAAAGATTTAGCAATTTCATTTAAAACATA 50
|||||||||.|..|||||||||||||.|||||.|||||||||||||||||
RBAM_011460__ 1 GTGACACGCTTGCTAGAAGTAAAAGACTTAGCCATTTCATTTAAAACATA 50
BSNT_01917___ 51 TGGCGGAGAGGTTCAGGCGATCCGCGGAGTGAATTTCCATCTGGATAAAG 100
.|||||||||||.|||||.||||||||.||||||||.|||.||.||||||
RBAM_011460__ 51 CGGCGGAGAGGTACAGGCAATCCGCGGCGTGAATTTTCATTTGAATAAAG 100
BSNT_01917___ 101 GAGAGACACTGGCGATTGTTGGAGAATCAGGTTCCGGAAAAAGTGTAACC 150
|||||||.||.|||||.||.||.||.||||||||||||||||||||.|||
RBAM_011460__ 101 GAGAGACGCTTGCGATCGTGGGGGAGTCAGGTTCCGGAAAAAGTGTGACC 150
BSNT_01917___ 151 TCTCAAGCGATTATGAAGCTGATTCCAATGCCTCCGGGTTATTTCAAACG 200
||.||||||||||||||||||||.||.|||||.|||||.||.||.|||.|
RBAM_011460__ 151 TCCCAAGCGATTATGAAGCTGATCCCGATGCCGCCGGGCTACTTTAAAAG 200
BSNT_01917___ 201 CGGTGAGATCCTGTTTGAAGGAAAGGATCTAGTGCCGCTGTCCGAAAAAG 250
.||..||||.||.|||||.|||...|||.|.||||||.||||||||||||
RBAM_011460__ 201 AGGACAGATTCTTTTTGACGGACGCGATATCGTGCCGATGTCCGAAAAAG 250
BSNT_01917___ 251 AAATGCAAAATG----TCCGGGGAAAAGAGATCGGCATGATATTCCAAGA 296
||||||| | ||.|.|||||.||.|||||.|||||.||||||||
RBAM_011460__ 251 AAATGCA----GGCCATCAGAGGAAAGGACATCGGGATGATTTTCCAAGA 296
BSNT_01917___ 297 TCCGATGACCTCATTAAATCCAACGATGAAAGTCGGTAAACAAATTACGG 346
||||||||||||..|.||.||.|||||||.||||||.|||||||||||||
RBAM_011460__ 297 TCCGATGACCTCTCTGAACCCGACGATGAGAGTCGGCAAACAAATTACGG 346
BSNT_01917___ 347 AAGTGCTTTTTAAACACGAGAAAATCTCAAAGGAAGCGGCTAAAAAACGC 396
||||||||||.|||||.||.||||||||||..|||||.||.|||||.|||
RBAM_011460__ 347 AAGTGCTTTTCAAACATGAAAAAATCTCAAGTGAAGCCGCGAAAAAGCGC 396
BSNT_01917___ 397 GCGGTTGAACTGCTGGAATTAGTCGGTATCCCAATGCCGGAAAAGCGGGT 446
||..|.||.|||||.||..|.|||||.||.||.|||||.|||||.|||.|
RBAM_011460__ 397 GCCATAGAGCTGCTTGATCTCGTCGGGATTCCGATGCCCGAAAAACGGAT 446
BSNT_01917___ 447 GAACCAATTTCCGCACGAATTTTCAGGCGGGATGAGGCAGCGGGTTGTCA 496
...||||||.||.||.||||||||||||||||||||.|||||.||.||||
RBAM_011460__ 447 CGGCCAATTCCCCCATGAATTTTCAGGCGGGATGAGACAGCGTGTCGTCA 496
BSNT_01917___ 497 TTGCCATGGCGCTTGCAGCGAATCCGAAGCTTCTGATCGCCGATGAGCCG 546
|.||.|||||||||||.||.||||||||.||..|.||.||||||||.|||
RBAM_011460__ 497 TCGCGATGGCGCTTGCGGCAAATCCGAAACTGTTAATTGCCGATGAACCG 546
BSNT_01917___ 547 ACAACTGCACTTGATGTAACGATTCAAGCGCAAATTCTGGAATTGATGAA 596
|||||.||.||||||||.||||||||.||.||.||.||.||..|||||||
RBAM_011460__ 547 ACAACAGCGCTTGATGTGACGATTCAGGCACAGATCCTTGAGCTGATGAA 596
BSNT_01917___ 597 GGATTTGCAAAAGAAAATTGACACGTCCATCATCTTTATTACACACGATC 646
.|||.||||||||||||||||.|||||.|||||.|||||.||.||.||||
RBAM_011460__ 597 AGATCTGCAAAAGAAAATTGATACGTCTATCATTTTTATCACGCATGATC 646
BSNT_01917___ 647 TTGGTGTTGTGGCAAATGTTGCTGACCGGGTCGCTGTCATGTACGCGGGA 696
|.||.|||||.||.|||||.||.|||||||||||.||||||||||||||.
RBAM_011460__ 647 TCGGCGTTGTCGCCAATGTCGCCGACCGGGTCGCCGTCATGTACGCGGGT 696
BSNT_01917___ 697 CAGATTGTAGAAACTGGTACGGTAGACGAAATCTTCTACGATCCGAGACA 746
|||.|.||.|||.|.||.|||||.||.||||||||.||.||||||.|.||
RBAM_011460__ 697 CAGGTCGTCGAATCGGGCACGGTGGATGAAATCTTTTATGATCCGCGCCA 746
BSNT_01917___ 747 TCCGTACACTTGGGGGCTTCTTGCATCCATGCCGACACTGGAAAGTTCAG 796
||||||.||.|||||.||.|||||.||.|||||.|..|||||.||..|.|
RBAM_011460__ 747 TCCGTATACGTGGGGACTGCTTGCCTCAATGCCTAGCCTGGACAGCACCG 796
BSNT_01917___ 797 GAGAGGAAGAGCTGACTGCCATTCCGGGCACACCGCCTGATTTGACAAAC 846
...|||||.|.|||||.||.||.||||||||.|||||||||.||||.||.
RBAM_011460__ 797 ATCAGGAAAAACTGACGGCTATCCCGGGCACGCCGCCTGATCTGACGAAT 846
BSNT_01917___ 847 CCGCCAAAAGGAGATGCTTTTGCCCTGCGGAGCCCTTATGCGATGAAAAT 896
||.||.|||||.|||||.|||||.||.||.|||.|.||||||||||||||
RBAM_011460__ 847 CCTCCGAAAGGGGATGCATTTGCGCTCCGCAGCTCATATGCGATGAAAAT 896
BSNT_01917___ 897 CGATTTTGAACAGGAGCCGCCAATGTTTAAGGTATCTGATACTCATTATG 946
.||.|||||||||||.|||||.||||.|||.||.||||||||.||||..|
RBAM_011460__ 897 TGACTTTGAACAGGAACCGCCGATGTATAAAGTGTCTGATACGCATTTCG 946
BSNT_01917___ 947 TCAAATCGTGGCTGCTTCATCCCGACGCGCCAAAGGTAGAGCCGCCAGAA 996
|.|||||||||||.||.|||||.||.|||||.|||||.|||||.||.|||
RBAM_011460__ 947 TGAAATCGTGGCTTCTGCATCCTGATGCGCCTAAGGTCGAGCCCCCTGAA 996
BSNT_01917___ 997 GCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGT 1046
|||||.||.||.|||||.|||.|.||..|.||.||||.|.|..|.|||||
RBAM_011460__ 997 GCGGTGAAGGCTAAAATCCGTCAGCTTCCGAATACGTATCAGCATCCTGT 1046
BSNT_01917___ 1047 CTTAGTGAGAGAAGGTG-----AATGA---- 1068
.|||.|||..||||||| |||||
RBAM_011460__ 1047 TTTAATGAAGGAAGGTGAAAAAAATGACTGA 1077
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