Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01916 and RBAM_011450
See
Amino acid alignment /
Visit
BSNT_01916 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:39
# Commandline: needle
# -asequence dna-align/BSNT_01916___oppC.1.9828.seq
# -bsequence dna-align/RBAM_011450___oppC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01916___oppC-RBAM_011450___oppC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01916___oppC-RBAM_011450___oppC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01916___oppC
# 2: RBAM_011450___oppC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 921
# Identity: 777/921 (84.4%)
# Similarity: 777/921 (84.4%)
# Gaps: 6/921 ( 0.7%)
# Score: 3292.0
#
#
#=======================================
BSNT_01916___ 1 ATGCAGAACATTCCGAAAAACATGTTTGAACCAGCCGCAGCGAATGCCGG 50
||||||||||||||.|||||.||||||||||||||..||||.||||||||
RBAM_011450__ 1 ATGCAGAACATTCCTAAAAATATGTTTGAACCAGCTTCAGCTAATGCCGG 50
BSNT_01916___ 51 CGATGCAGAAAAAATAAGTAAAAAGAGCCTTTCCCTCTGGAAAGATGCGA 100
||||||.||||||||||.||||||.||||||||||||||||||||.||.|
RBAM_011450__ 51 CGATGCCGAAAAAATAAATAAAAAAAGCCTTTCCCTCTGGAAAGACGCCA 100
BSNT_01916___ 101 TGCTTCGCTTCCGCAGCAATAAGCTTGCAATGGTCGGGCTTATTA-TTAT 149
||||.|||||||||||||||||||||||.||||||||| ||..|| |.||
RBAM_011450__ 101 TGCTCCGCTTCCGCAGCAATAAGCTTGCGATGGTCGGG-TTCGTACTGAT 149
BSNT_01916___ 150 CGTGCTCATTATCCTTATGGCAATTTTTGCGCCGATGTTCTCAAGGTATG 199
|||.||.|||||.||.|||||.|||||||||||..|.||.||||||||||
RBAM_011450__ 150 CGTTCTTATTATTCTGATGGCGATTTTTGCGCCTGTCTTTTCAAGGTATG 199
BSNT_01916___ 200 ATTATTCAACTACTAATCTCTTAAATGCGGATAAGCCCCCTTCAAAAGAT 249
|||||.|.|||||.|||||.||||||||||||||..|.||.||.||||||
RBAM_011450__ 200 ATTATGCCACTACCAATCTATTAAATGCGGATAAAGCGCCGTCGAAAGAT 249
BSNT_01916___ 250 CACTGGTTCGGAACAGATGATCTTGGGCGGGACATTTTCGTCCGTACATG 299
||.||||||||.||.|||||.|||||..||||.||.||||||||.|||||
RBAM_011450__ 250 CATTGGTTCGGCACGGATGACCTTGGAAGGGATATATTCGTCCGGACATG 299
BSNT_01916___ 300 GGTAGGGGCGCGA--ATCTCAATCTTTATCGGTGTTGCAGCTGCTGTTCT 347
||| |||||||| ||.||.||||||||||||||.||||||||.||.||
RBAM_011450__ 300 GGT--GGGCGCGAGGATTTCCATCTTTATCGGTGTCGCAGCTGCCGTGCT 347
BSNT_01916___ 348 TGATTTGCTGATCGGCGTCATTTGGGGGAGCATTTCAGGCTTCCGCGGAG 397
||||||..|.||||||||.||.|||||.||||||||.||.||||||||.|
RBAM_011450__ 348 TGATTTATTAATCGGCGTAATCTGGGGCAGCATTTCCGGATTCCGCGGCG 397
BSNT_01916___ 398 GCAGAACGGACGAAATCATGATGCGTATCGCTGATATCCTTTGGGCAGTT 447
|..|.||.||.|||.|.||||||||.|||||.||.||.||.|||||.|||
RBAM_011450__ 398 GACGCACAGATGAAGTGATGATGCGCATCGCCGACATTCTGTGGGCTGTT 447
BSNT_01916___ 448 CCTTCATTATTAATGGTTATCTTACTGATGGTTGTTCTTCCGAAAGGTCT 497
||||||||||||||||||||.||.||||||||||||||.||||||||..|
RBAM_011450__ 448 CCTTCATTATTAATGGTTATTTTGCTGATGGTTGTTCTGCCGAAAGGATT 497
BSNT_01916___ 498 ATTTACGATTATTATTGCCATGACGATTACGGGCTGGATTAATATGGCCA 547
..|.||.|||||..|.|||||||||||.|||||||||||.||||||||.|
RBAM_011450__ 498 GCTGACCATTATCGTCGCCATGACGATCACGGGCTGGATCAATATGGCGA 547
BSNT_01916___ 548 GAATCGTGCGCGGACAAGTGCTGCAGCTGAAGAATCAGGAGTATGTGCTT 597
|.|||||.||||||||.||||||||..|.|||||||||||||||||||||
RBAM_011450__ 548 GGATCGTCCGCGGACAGGTGCTGCAATTAAAGAATCAGGAGTATGTGCTT 597
BSNT_01916___ 598 GCTTCACAGACACTGGGTGCAAAAACATCCCGTCTTCTGTTTAAACATAT 647
||||||||||||||.||.||.|||||...|||.|||.|||||||.|||||
RBAM_011450__ 598 GCTTCACAGACACTCGGCGCCAAAACCGGCCGGCTTTTGTTTAAGCATAT 647
BSNT_01916___ 648 CGTGCCAAACGCAATGGGTTCTATTTTGGTCACGATGACACTGACAGTTC 697
|||.||.|||||.|||||.|||||..|.||.||||||||||||||.||||
RBAM_011450__ 648 CGTCCCGAACGCGATGGGCTCTATCCTCGTAACGATGACACTGACGGTTC 697
BSNT_01916___ 698 CTACTGCGATTTTTACAGAAGCCTTTTTAAGCTATTTGGGACTCGGTGTT 747
|.||.|||||||||||||||||.||||||||.||||||||.|||||.||.
RBAM_011450__ 698 CGACGGCGATTTTTACAGAAGCGTTTTTAAGTTATTTGGGCCTCGGCGTA 747
BSNT_01916___ 748 CCGGCTCCGCTGGCAAGCTGGGGAACGATGGCTTCTGACGGATTGCCTGC 797
||.||.|||||.||.|||||||||||||||||.||.||||||||||||||
RBAM_011450__ 748 CCTGCGCCGCTTGCGAGCTGGGGAACGATGGCCTCAGACGGATTGCCTGC 797
BSNT_01916___ 798 ATTGACCTATTATCCGTGGCGTTTATTCTTCCCTGCCGGATTTATCTGCA 847
|||.||||||||.||.||||||.|.||.|||||||||||.|||||||||.
RBAM_011450__ 798 ATTAACCTATTACCCTTGGCGTCTGTTTTTCCCTGCCGGTTTTATCTGCT 847
BSNT_01916___ 848 TTACAATGTTTGGCTTTAACGTTGTCGGCGACGGATTAAGAGACGCATTG 897
|..|.|||||.||.||||||||||||||||||||.|||||||||||..||
RBAM_011450__ 848 TGGCGATGTTCGGTTTTAACGTTGTCGGCGACGGGTTAAGAGACGCGCTG 897
BSNT_01916___ 898 GATCCTAAGTTACGTAAATAA 918
||||||||||||||.||||||
RBAM_011450__ 898 GATCCTAAGTTACGCAAATAA 918
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.