Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01916 and RBAM_011450

See Amino acid alignment / Visit BSNT_01916 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:39
# Commandline: needle
#    -asequence dna-align/BSNT_01916___oppC.1.9828.seq
#    -bsequence dna-align/RBAM_011450___oppC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01916___oppC-RBAM_011450___oppC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01916___oppC-RBAM_011450___oppC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01916___oppC
# 2: RBAM_011450___oppC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 921
# Identity:     777/921 (84.4%)
# Similarity:   777/921 (84.4%)
# Gaps:           6/921 ( 0.7%)
# Score: 3292.0
# 
#
#=======================================

BSNT_01916___      1 ATGCAGAACATTCCGAAAAACATGTTTGAACCAGCCGCAGCGAATGCCGG     50
                     ||||||||||||||.|||||.||||||||||||||..||||.||||||||
RBAM_011450__      1 ATGCAGAACATTCCTAAAAATATGTTTGAACCAGCTTCAGCTAATGCCGG     50

BSNT_01916___     51 CGATGCAGAAAAAATAAGTAAAAAGAGCCTTTCCCTCTGGAAAGATGCGA    100
                     ||||||.||||||||||.||||||.||||||||||||||||||||.||.|
RBAM_011450__     51 CGATGCCGAAAAAATAAATAAAAAAAGCCTTTCCCTCTGGAAAGACGCCA    100

BSNT_01916___    101 TGCTTCGCTTCCGCAGCAATAAGCTTGCAATGGTCGGGCTTATTA-TTAT    149
                     ||||.|||||||||||||||||||||||.||||||||| ||..|| |.||
RBAM_011450__    101 TGCTCCGCTTCCGCAGCAATAAGCTTGCGATGGTCGGG-TTCGTACTGAT    149

BSNT_01916___    150 CGTGCTCATTATCCTTATGGCAATTTTTGCGCCGATGTTCTCAAGGTATG    199
                     |||.||.|||||.||.|||||.|||||||||||..|.||.||||||||||
RBAM_011450__    150 CGTTCTTATTATTCTGATGGCGATTTTTGCGCCTGTCTTTTCAAGGTATG    199

BSNT_01916___    200 ATTATTCAACTACTAATCTCTTAAATGCGGATAAGCCCCCTTCAAAAGAT    249
                     |||||.|.|||||.|||||.||||||||||||||..|.||.||.||||||
RBAM_011450__    200 ATTATGCCACTACCAATCTATTAAATGCGGATAAAGCGCCGTCGAAAGAT    249

BSNT_01916___    250 CACTGGTTCGGAACAGATGATCTTGGGCGGGACATTTTCGTCCGTACATG    299
                     ||.||||||||.||.|||||.|||||..||||.||.||||||||.|||||
RBAM_011450__    250 CATTGGTTCGGCACGGATGACCTTGGAAGGGATATATTCGTCCGGACATG    299

BSNT_01916___    300 GGTAGGGGCGCGA--ATCTCAATCTTTATCGGTGTTGCAGCTGCTGTTCT    347
                     |||  ||||||||  ||.||.||||||||||||||.||||||||.||.||
RBAM_011450__    300 GGT--GGGCGCGAGGATTTCCATCTTTATCGGTGTCGCAGCTGCCGTGCT    347

BSNT_01916___    348 TGATTTGCTGATCGGCGTCATTTGGGGGAGCATTTCAGGCTTCCGCGGAG    397
                     ||||||..|.||||||||.||.|||||.||||||||.||.||||||||.|
RBAM_011450__    348 TGATTTATTAATCGGCGTAATCTGGGGCAGCATTTCCGGATTCCGCGGCG    397

BSNT_01916___    398 GCAGAACGGACGAAATCATGATGCGTATCGCTGATATCCTTTGGGCAGTT    447
                     |..|.||.||.|||.|.||||||||.|||||.||.||.||.|||||.|||
RBAM_011450__    398 GACGCACAGATGAAGTGATGATGCGCATCGCCGACATTCTGTGGGCTGTT    447

BSNT_01916___    448 CCTTCATTATTAATGGTTATCTTACTGATGGTTGTTCTTCCGAAAGGTCT    497
                     ||||||||||||||||||||.||.||||||||||||||.||||||||..|
RBAM_011450__    448 CCTTCATTATTAATGGTTATTTTGCTGATGGTTGTTCTGCCGAAAGGATT    497

BSNT_01916___    498 ATTTACGATTATTATTGCCATGACGATTACGGGCTGGATTAATATGGCCA    547
                     ..|.||.|||||..|.|||||||||||.|||||||||||.||||||||.|
RBAM_011450__    498 GCTGACCATTATCGTCGCCATGACGATCACGGGCTGGATCAATATGGCGA    547

BSNT_01916___    548 GAATCGTGCGCGGACAAGTGCTGCAGCTGAAGAATCAGGAGTATGTGCTT    597
                     |.|||||.||||||||.||||||||..|.|||||||||||||||||||||
RBAM_011450__    548 GGATCGTCCGCGGACAGGTGCTGCAATTAAAGAATCAGGAGTATGTGCTT    597

BSNT_01916___    598 GCTTCACAGACACTGGGTGCAAAAACATCCCGTCTTCTGTTTAAACATAT    647
                     ||||||||||||||.||.||.|||||...|||.|||.|||||||.|||||
RBAM_011450__    598 GCTTCACAGACACTCGGCGCCAAAACCGGCCGGCTTTTGTTTAAGCATAT    647

BSNT_01916___    648 CGTGCCAAACGCAATGGGTTCTATTTTGGTCACGATGACACTGACAGTTC    697
                     |||.||.|||||.|||||.|||||..|.||.||||||||||||||.||||
RBAM_011450__    648 CGTCCCGAACGCGATGGGCTCTATCCTCGTAACGATGACACTGACGGTTC    697

BSNT_01916___    698 CTACTGCGATTTTTACAGAAGCCTTTTTAAGCTATTTGGGACTCGGTGTT    747
                     |.||.|||||||||||||||||.||||||||.||||||||.|||||.||.
RBAM_011450__    698 CGACGGCGATTTTTACAGAAGCGTTTTTAAGTTATTTGGGCCTCGGCGTA    747

BSNT_01916___    748 CCGGCTCCGCTGGCAAGCTGGGGAACGATGGCTTCTGACGGATTGCCTGC    797
                     ||.||.|||||.||.|||||||||||||||||.||.||||||||||||||
RBAM_011450__    748 CCTGCGCCGCTTGCGAGCTGGGGAACGATGGCCTCAGACGGATTGCCTGC    797

BSNT_01916___    798 ATTGACCTATTATCCGTGGCGTTTATTCTTCCCTGCCGGATTTATCTGCA    847
                     |||.||||||||.||.||||||.|.||.|||||||||||.|||||||||.
RBAM_011450__    798 ATTAACCTATTACCCTTGGCGTCTGTTTTTCCCTGCCGGTTTTATCTGCT    847

BSNT_01916___    848 TTACAATGTTTGGCTTTAACGTTGTCGGCGACGGATTAAGAGACGCATTG    897
                     |..|.|||||.||.||||||||||||||||||||.|||||||||||..||
RBAM_011450__    848 TGGCGATGTTCGGTTTTAACGTTGTCGGCGACGGGTTAAGAGACGCGCTG    897

BSNT_01916___    898 GATCCTAAGTTACGTAAATAA    918
                     ||||||||||||||.||||||
RBAM_011450__    898 GATCCTAAGTTACGCAAATAA    918


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