Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01915 and RBAM_011440

See Amino acid alignment / Visit BSNT_01915 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:39
# Commandline: needle
#    -asequence dna-align/BSNT_01915___oppB.1.9828.seq
#    -bsequence dna-align/RBAM_011440___oppB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01915___oppB-RBAM_011440___oppB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01915___oppB-RBAM_011440___oppB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01915___oppB
# 2: RBAM_011440___oppB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 941
# Identity:     786/941 (83.5%)
# Similarity:   786/941 (83.5%)
# Gaps:          10/941 ( 1.1%)
# Score: 3288.0
# 
#
#=======================================

BSNT_01915___      1 TTGCTAAAATATATCGGAAGACGCTTAGTCTATATGATTATCACACTATT     50
                     |||||.|||||||||||.|.|||.||..|.||.|||||.|||||.||.||
RBAM_011440__      1 TTGCTGAAATATATCGGTAAACGATTCATTTACATGATCATCACGCTGTT     50

BSNT_01915___     51 TGTGATTGTAACTGTGACATTCTTCTTAATGCAAGCAGCACCGGGCGGGC    100
                     |||||||||.||.|..|||||||||||||||||.|||||.||||||||.|
RBAM_011440__     51 TGTGATTGTGACCGCCACATTCTTCTTAATGCAGGCAGCGCCGGGCGGAC    100

BSNT_01915___    101 CATTTTCAGGTGAGAAAAAGCTTCCGCCTGAAATTGAAGCAAACTTAAAT    150
                     |||||||.||.||.|.||||||.||||||||||||||.||||||||||  
RBAM_011440__    101 CATTTTCCGGCGAAAGAAAGCTGCCGCCTGAAATTGAGGCAAACTTAA--    148

BSNT_01915___    151 ACG--CACTATGGCTTGGACAAGCCGCTGTTTGTACAATATGTCAGTTAT    198
                     |||  |||||||||.||||||||||.||.||.||.|||||||||||.||.
RBAM_011440__    149 ACGAACACTATGGCCTGGACAAGCCTCTTTTCGTTCAATATGTCAGCTAC    198

BSNT_01915___    199 TTGAAATCAGTTGCAATGTGGGATTTCGGACCATCATTTAAATATAAAGG    248
                     ||.|||||.||.||.||||||||.||||||||.||.||||||||||||||
RBAM_011440__    199 TTAAAATCTGTGGCGATGTGGGACTTCGGACCTTCTTTTAAATATAAAGG    248

BSNT_01915___    249 TCAGAGTGTTAACGACCTGATCAATTCAGGTTTCCCCGTTTCATTCACTC    298
                     .||.||||||||.||..|.|||||||||||.||||||||.||||||||||
RBAM_011440__    249 CCAAAGTGTTAATGATTTAATCAATTCAGGCTTCCCCGTCTCATTCACTC    298

BSNT_01915___    299 TTGGAGCAGAAGCTATTCTCCTCGCTTTAGCGTTAGGTGTATTGTTTGGA    348
                     |.||.|||||||||||||||||||||||||||||.|||||..|.||.||.
RBAM_011440__    299 TCGGTGCAGAAGCTATTCTCCTCGCTTTAGCGTTCGGTGTGCTTTTCGGG    348

BSNT_01915___    349 GTCATTGCAGCTCTTTACCATAATAAGTGGCAGGATTATACCGTCGCGAT    398
                     ||..||||.||.||.|||||||||||.|||||||||||||||.|.|||||
RBAM_011440__    349 GTGCTTGCTGCCCTGTACCATAATAAATGGCAGGATTATACCATTGCGAT    398

BSNT_01915___    399 TTTAACGATATTTGGTATTTCAGTTCCAAGCTTTATCATGGCGGCTGTTC    448
                     |||||||||.|||||.||.||||||||.||||||||..|||||.|..||.
RBAM_011440__    399 TTTAACGATCTTTGGGATCTCAGTTCCGAGCTTTATATTGGCGACGATTT    448

BSNT_01915___    449 TGCAATATGTGTTCTCCATGAAGCTTGGGCTGTTTCCGGTCGCGGGGTGG    498
                     ||||||||.|.|||||.||.||..|.|..|||||.||||||||.||||||
RBAM_011440__    449 TGCAATATATTTTCTCAATTAAATTAGAACTGTTCCCGGTCGCAGGGTGG    498

BSNT_01915___    499 GAGTCCTGGGCATACACCTTTTTGCCTTCAATCGCACTTGCTTCCATGCC    548
                     ||.||||||||||||||||||.||||.||.||.||.||.|||||||||||
RBAM_011440__    499 GAATCCTGGGCATACACCTTTCTGCCCTCTATTGCGCTCGCTTCCATGCC    548

BSNT_01915___    549 GATGGCGTTCATTGCCAGACTTTCCCGTTCAAGCATGATCGAAGTGTTAA    598
                     |||||||||||||||||||||.|||||||||||||||||.||||||||||
RBAM_011440__    549 GATGGCGTTCATTGCCAGACTCTCCCGTTCAAGCATGATTGAAGTGTTAA    598

BSNT_01915___    599 ACAGTGATTATATCCGCACTGCGAAAGCGAAAGGGCTGTCTCGTCCAGCA    648
                     ||||.|||||.||.||.|||||.|||||.|||||.||.||.|||||..||
RBAM_011440__    599 ACAGCGATTACATACGGACTGCAAAAGCTAAAGGACTTTCCCGTCCGTCA    648

BSNT_01915___    649 GTTACTGTGCGGCACGCCATTCGAAACGCGCTTTTGCCGGTTGTTACATA    698
                     ||.||.|||||.||.||..|.||||||||||||||||||||.||.|||||
RBAM_011440__    649 GTCACCGTGCGCCATGCGCTGCGAAACGCGCTTTTGCCGGTCGTGACATA    698

BSNT_01915___    699 CATGGGCCCGATGGCCGC--CCAGGTCTTAACGGGAAGTTTTATCATTGA    746
                     .|||||.||||||||.||  |||  |.||||||||||||||.||||||||
RBAM_011440__    699 TATGGGGCCGATGGCGGCATCCA--TTTTAACGGGAAGTTTCATCATTGA    746

BSNT_01915___    747 AACGATTTTTGGGATCCCGGGTCTTGGTTCCCACTTCGTAAACAGTATTA    796
                     |.|.|||||.||.||.||.|||.|.||..|.||.||.||||||||.||||
RBAM_011440__    747 ATCCATTTTCGGAATTCCCGGTTTAGGCGCGCATTTTGTAAACAGCATTA    796

BSNT_01915___    797 CAAACCGTGATTATACAGTCATTATGGGTGTAACGGTGTTCTTCAGTGTC    846
                     ||||||||||||||||.|||||||||||.||.||.|||||||||||.||.
RBAM_011440__    797 CAAACCGTGATTATACGGTCATTATGGGAGTTACCGTGTTCTTCAGCGTG    846

BSNT_01915___    847 ATCCTGCTATTGTGTGTATTAATCGTAGACGTGCTTTACGGCATT-ATTG    895
                     .|||||||.||.||.||||||||.|||||||||||.||||| ||| ||.|
RBAM_011440__    847 CTCCTGCTTTTATGCGTATTAATTGTAGACGTGCTGTACGG-ATTAATCG    895

BSNT_01915___    896 ATCCAAGAATCAAGCTTTCCAAAGCAAAGAAAGGAGCCTAG    936
                     ||||.||||||||||||||||||||||||||||||||||||
RBAM_011440__    896 ATCCGAGAATCAAGCTTTCCAAAGCAAAGAAAGGAGCCTAG    936


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