Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01915 and RBAM_011440
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:39
# Commandline: needle
# -asequence dna-align/BSNT_01915___oppB.1.9828.seq
# -bsequence dna-align/RBAM_011440___oppB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01915___oppB-RBAM_011440___oppB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01915___oppB-RBAM_011440___oppB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01915___oppB
# 2: RBAM_011440___oppB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 941
# Identity: 786/941 (83.5%)
# Similarity: 786/941 (83.5%)
# Gaps: 10/941 ( 1.1%)
# Score: 3288.0
#
#
#=======================================
BSNT_01915___ 1 TTGCTAAAATATATCGGAAGACGCTTAGTCTATATGATTATCACACTATT 50
|||||.|||||||||||.|.|||.||..|.||.|||||.|||||.||.||
RBAM_011440__ 1 TTGCTGAAATATATCGGTAAACGATTCATTTACATGATCATCACGCTGTT 50
BSNT_01915___ 51 TGTGATTGTAACTGTGACATTCTTCTTAATGCAAGCAGCACCGGGCGGGC 100
|||||||||.||.|..|||||||||||||||||.|||||.||||||||.|
RBAM_011440__ 51 TGTGATTGTGACCGCCACATTCTTCTTAATGCAGGCAGCGCCGGGCGGAC 100
BSNT_01915___ 101 CATTTTCAGGTGAGAAAAAGCTTCCGCCTGAAATTGAAGCAAACTTAAAT 150
|||||||.||.||.|.||||||.||||||||||||||.||||||||||
RBAM_011440__ 101 CATTTTCCGGCGAAAGAAAGCTGCCGCCTGAAATTGAGGCAAACTTAA-- 148
BSNT_01915___ 151 ACG--CACTATGGCTTGGACAAGCCGCTGTTTGTACAATATGTCAGTTAT 198
||| |||||||||.||||||||||.||.||.||.|||||||||||.||.
RBAM_011440__ 149 ACGAACACTATGGCCTGGACAAGCCTCTTTTCGTTCAATATGTCAGCTAC 198
BSNT_01915___ 199 TTGAAATCAGTTGCAATGTGGGATTTCGGACCATCATTTAAATATAAAGG 248
||.|||||.||.||.||||||||.||||||||.||.||||||||||||||
RBAM_011440__ 199 TTAAAATCTGTGGCGATGTGGGACTTCGGACCTTCTTTTAAATATAAAGG 248
BSNT_01915___ 249 TCAGAGTGTTAACGACCTGATCAATTCAGGTTTCCCCGTTTCATTCACTC 298
.||.||||||||.||..|.|||||||||||.||||||||.||||||||||
RBAM_011440__ 249 CCAAAGTGTTAATGATTTAATCAATTCAGGCTTCCCCGTCTCATTCACTC 298
BSNT_01915___ 299 TTGGAGCAGAAGCTATTCTCCTCGCTTTAGCGTTAGGTGTATTGTTTGGA 348
|.||.|||||||||||||||||||||||||||||.|||||..|.||.||.
RBAM_011440__ 299 TCGGTGCAGAAGCTATTCTCCTCGCTTTAGCGTTCGGTGTGCTTTTCGGG 348
BSNT_01915___ 349 GTCATTGCAGCTCTTTACCATAATAAGTGGCAGGATTATACCGTCGCGAT 398
||..||||.||.||.|||||||||||.|||||||||||||||.|.|||||
RBAM_011440__ 349 GTGCTTGCTGCCCTGTACCATAATAAATGGCAGGATTATACCATTGCGAT 398
BSNT_01915___ 399 TTTAACGATATTTGGTATTTCAGTTCCAAGCTTTATCATGGCGGCTGTTC 448
|||||||||.|||||.||.||||||||.||||||||..|||||.|..||.
RBAM_011440__ 399 TTTAACGATCTTTGGGATCTCAGTTCCGAGCTTTATATTGGCGACGATTT 448
BSNT_01915___ 449 TGCAATATGTGTTCTCCATGAAGCTTGGGCTGTTTCCGGTCGCGGGGTGG 498
||||||||.|.|||||.||.||..|.|..|||||.||||||||.||||||
RBAM_011440__ 449 TGCAATATATTTTCTCAATTAAATTAGAACTGTTCCCGGTCGCAGGGTGG 498
BSNT_01915___ 499 GAGTCCTGGGCATACACCTTTTTGCCTTCAATCGCACTTGCTTCCATGCC 548
||.||||||||||||||||||.||||.||.||.||.||.|||||||||||
RBAM_011440__ 499 GAATCCTGGGCATACACCTTTCTGCCCTCTATTGCGCTCGCTTCCATGCC 548
BSNT_01915___ 549 GATGGCGTTCATTGCCAGACTTTCCCGTTCAAGCATGATCGAAGTGTTAA 598
|||||||||||||||||||||.|||||||||||||||||.||||||||||
RBAM_011440__ 549 GATGGCGTTCATTGCCAGACTCTCCCGTTCAAGCATGATTGAAGTGTTAA 598
BSNT_01915___ 599 ACAGTGATTATATCCGCACTGCGAAAGCGAAAGGGCTGTCTCGTCCAGCA 648
||||.|||||.||.||.|||||.|||||.|||||.||.||.|||||..||
RBAM_011440__ 599 ACAGCGATTACATACGGACTGCAAAAGCTAAAGGACTTTCCCGTCCGTCA 648
BSNT_01915___ 649 GTTACTGTGCGGCACGCCATTCGAAACGCGCTTTTGCCGGTTGTTACATA 698
||.||.|||||.||.||..|.||||||||||||||||||||.||.|||||
RBAM_011440__ 649 GTCACCGTGCGCCATGCGCTGCGAAACGCGCTTTTGCCGGTCGTGACATA 698
BSNT_01915___ 699 CATGGGCCCGATGGCCGC--CCAGGTCTTAACGGGAAGTTTTATCATTGA 746
.|||||.||||||||.|| ||| |.||||||||||||||.||||||||
RBAM_011440__ 699 TATGGGGCCGATGGCGGCATCCA--TTTTAACGGGAAGTTTCATCATTGA 746
BSNT_01915___ 747 AACGATTTTTGGGATCCCGGGTCTTGGTTCCCACTTCGTAAACAGTATTA 796
|.|.|||||.||.||.||.|||.|.||..|.||.||.||||||||.||||
RBAM_011440__ 747 ATCCATTTTCGGAATTCCCGGTTTAGGCGCGCATTTTGTAAACAGCATTA 796
BSNT_01915___ 797 CAAACCGTGATTATACAGTCATTATGGGTGTAACGGTGTTCTTCAGTGTC 846
||||||||||||||||.|||||||||||.||.||.|||||||||||.||.
RBAM_011440__ 797 CAAACCGTGATTATACGGTCATTATGGGAGTTACCGTGTTCTTCAGCGTG 846
BSNT_01915___ 847 ATCCTGCTATTGTGTGTATTAATCGTAGACGTGCTTTACGGCATT-ATTG 895
.|||||||.||.||.||||||||.|||||||||||.||||| ||| ||.|
RBAM_011440__ 847 CTCCTGCTTTTATGCGTATTAATTGTAGACGTGCTGTACGG-ATTAATCG 895
BSNT_01915___ 896 ATCCAAGAATCAAGCTTTCCAAAGCAAAGAAAGGAGCCTAG 936
||||.||||||||||||||||||||||||||||||||||||
RBAM_011440__ 896 ATCCGAGAATCAAGCTTTCCAAAGCAAAGAAAGGAGCCTAG 936
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