Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01904 and RBAM_011370
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:38
# Commandline: needle
# -asequence dna-align/BSNT_01904___appF.1.9828.seq
# -bsequence dna-align/RBAM_011370___appF.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01904___appF-RBAM_011370___appF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01904___appF-RBAM_011370___appF.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01904___appF
# 2: RBAM_011370___appF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 996
# Identity: 775/996 (77.8%)
# Similarity: 775/996 (77.8%)
# Gaps: 12/996 ( 1.2%)
# Score: 2995.0
#
#
#=======================================
BSNT_01904___ 1 ATGACAGCAGCTAATCAAGAAACAATCTTAGAGCTTCGTGACGTAAAAAA 50
||||||||.||....||||||||.||.||||||||....|||||||||||
RBAM_011370__ 1 ATGACAGCTGCAGGCCAAGAAACGATTTTAGAGCTGAAAGACGTAAAAAA 50
BSNT_01904___ 51 ATACTTTCCGATCCGGTCAGGCCTTTTTCAAAGAAAAGTCGGTGATGTAA 100
|||.||.||||||||.||.||..||||||||||.||||||||||||.|||
RBAM_011370__ 51 ATATTTCCCGATCCGCTCCGGTTTTTTTCAAAGGAAAGTCGGTGATATAA 100
BSNT_01904___ 101 AAGCGGTGGATGGTGTTTCATTTTCGTTAAAAAAAGGAGAAACACTCGGA 150
|.||.||.||.||||||||.|||||..|.||....||.||.||.|||||.
RBAM_011370__ 101 AGGCTGTTGACGGTGTTTCTTTTTCACTGAAGCGCGGGGAGACGCTCGGC 150
BSNT_01904___ 151 ATCGTTGGAGAGTCGGGCTGCGGAAAATCGACTGCCGGCAGAACGATGAT 200
|||||.||.||.||.||.|||||.|||||.||.||.||.||.||||||||
RBAM_011370__ 151 ATCGTCGGTGAATCAGGATGCGGCAAATCAACGGCGGGAAGGACGATGAT 200
BSNT_01904___ 201 CAGACTGTACAAACCGACAGAGGGCCAAATTCTTTTTAAAGGGCAGGATA 250
|.|..|.|||||.||||||||.||||..|||||||||||.||.|||||||
RBAM_011370__ 201 CCGTTTATACAAGCCGACAGACGGCCGGATTCTTTTTAAGGGTCAGGATA 250
BSNT_01904___ 251 TTTCC----AATCTGTCAGAGGAGAAGCTGCGGAAGAGTGTCCGCAAAAA 296
|.||| .|||| ||.||.||||||.|.||.||.|||||||||||
RBAM_011370__ 251 TCTCCGGCTTATCT----GAAGAAAAGCTGAGAAAAAGCGTCCGCAAAAA 296
BSNT_01904___ 297 TATTCAAATGGTTTTCCAAGATCCATTTGCTTCGTTAAACCCGAGAAAGA 346
.||.||.|||||.|||||||||||.||.||.||..|.||||||||.||.|
RBAM_011370__ 297 CATCCAGATGGTCTTCCAAGATCCCTTCGCATCCCTTAACCCGAGGAAAA 346
BSNT_01904___ 347 CCCTGCGTTCCATCATAAAGGAGCCGTTTAATACGCACAACATGTATACC 396
|.|||||||||||.||.||.||||||||..|.||.|||.|.|||||.|.|
RBAM_011370__ 347 CGCTGCGTTCCATTATTAAAGAGCCGTTCCAGACTCACCATATGTACAGC 396
BSNT_01904___ 397 ATGCGTGAACGAAACGAAAAAGTTGAAGAGCTGCTTGCAAGAGTAGGGCT 446
|||.|.||.||.|||||...|||.||.||||||||.||.|.|||.||.||
RBAM_011370__ 397 ATGAGCGAGCGGAACGAGCGAGTGGAGGAGCTGCTGGCGAAAGTCGGCCT 446
BSNT_01904___ 447 TCACCCGTCGTTTGCCGGCCGTTATCCCCATGAGTTTTCAGGCGGCCAGC 496
|||.|||...|||||...|||.|||||.||.||.|||||.||.||.||||
RBAM_011370__ 447 TCATCCGAGCTTTGCAAACCGCTATCCGCACGAATTTTCCGGAGGGCAGC 496
BSNT_01904___ 497 GTCAGCGGATCGGCATTGCCAGAGCACTCACTTTGAATCCAGAGCTGATC 546
|.|||||||||||.|||||..|.||.||.||.||||||||.||||||||.
RBAM_011370__ 497 GCCAGCGGATCGGGATTGCGCGGGCTCTGACGTTGAATCCCGAGCTGATT 546
BSNT_01904___ 547 ATTGCAGATGAGCCGGTTTCCGCACTTGATGTATCCATTCAGGCCCAAGT 596
|||||.|||||.||.|||||||||||.|||||.||||||||||||||.||
RBAM_011370__ 547 ATTGCGGATGAACCCGTTTCCGCACTCGATGTCTCCATTCAGGCCCAGGT 596
BSNT_01904___ 597 GATTAACTTGATGGAGGAATTACAGGAAGAATTTAATCTTACGTATCTAT 646
.||.||..|||||||.|||.|.|||||.|||||.||.||.||.|||.|.|
RBAM_011370__ 597 CATCAATCTGATGGAAGAACTGCAGGATGAATTCAACCTGACCTATTTGT 646
BSNT_01904___ 647 TTATCTCTCATGATCTGAGTGTCGTCCGCCATATCAGCGACAGAGTCGGA 696
||||.|||||||||.|||||||.||||||||||||||||||||||||||.
RBAM_011370__ 647 TTATTTCTCATGATTTGAGTGTTGTCCGCCATATCAGCGACAGAGTCGGC 696
BSNT_01904___ 697 GTAATGTATCTTGGCAAAATGATGGAACTGACCGGCAAGCATGAGCTTTA 746
||.||||||||.||.|||||||||||.|||||||..||.||.|||||.||
RBAM_011370__ 697 GTCATGTATCTGGGAAAAATGATGGAGCTGACCGATAAACACGAGCTGTA 746
BSNT_01904___ 747 TGACAACCCGCTTCACCCATATACCCAAGCGCTTTTATCCTCCGTTCCTG 796
.|.|||.|||||||||||.|||||.|||||||||||.||.||.||.||.|
RBAM_011370__ 747 CGGCAATCCGCTTCACCCTTATACGCAAGCGCTTTTGTCTTCAGTGCCCG 796
BSNT_01904___ 797 TTACAAGAAAAAGAGGATCTGTCAAACGTGAACGCATTGTCCTGAAGGGA 846
|.||.|||||||.||...|.|||||.||.|||||.||..|||||||.|||
RBAM_011370__ 797 TCACGAGAAAAAAAGACGCCGTCAAGCGGGAACGAATCATCCTGAAAGGA 846
BSNT_01904___ 847 GAACTGCCTAGTCCGGCCAACCCGCCAAAAGGCTGCGTATTCCACACAAG 896
||||||||.||.|||||.||||||||.|||||||||||.||||||||..|
RBAM_011370__ 847 GAACTGCCAAGCCCGGCAAACCCGCCGAAAGGCTGCGTGTTCCACACGCG 896
BSNT_01904___ 897 ATGTCCTGTTGCAAAACCGATATGCAAGGAACAAATACCAGAATTTAAAG 946
.||.||..|.||.||||||||.||||||||||||||.||.|.||||.|||
RBAM_011370__ 897 GTGCCCGATGGCCAAACCGATCTGCAAGGAACAAATCCCGGCATTTGAAG 946
BSNT_01904___ 947 AAGCTGCTCCCAGCCACTTTGTGGCTTGTCACCTTTATA--GCTAA 990
||||.||||||.||||.|..||.|||||.|| |||||| .||.|
RBAM_011370__ 947 AAGCCGCTCCCGGCCATTACGTCGCTTGCCA--TTTATATGCCTGA 990
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