Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01896 and RBAM_011310

See Amino acid alignment / Visit BSNT_01896 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:38
# Commandline: needle
#    -asequence dna-align/BSNT_01896___comZ.1.9828.seq
#    -bsequence dna-align/RBAM_011310___comZ.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01896___comZ-RBAM_011310___comZ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01896___comZ-RBAM_011310___comZ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01896___comZ
# 2: RBAM_011310___comZ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 195
# Identity:     150/195 (76.9%)
# Similarity:   150/195 (76.9%)
# Gaps:           6/195 ( 3.1%)
# Score: 562.5
# 
#
#=======================================

BSNT_01896___      1 ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATCT     50
                     ||||||||.|||||.||.||||||||..||||.||.||.||||||||.||
RBAM_011310__      1 ATGCAGCATGAAAAGTCTCTTGAATTTATGCAGATCGCGATGAAATACCT     50

BSNT_01896___     51 CCCTGAAGCGAAAGAACAGCTTGAGAAATCAGGCATTGAGCTCTCAATGG    100
                     .||.|||||.||.|...|||||||||||||.|||||.||.||.||.||||
RBAM_011310__     51 GCCGGAAGCAAAGGCGGAGCTTGAGAAATCCGGCATAGATCTGTCTATGG    100

BSNT_01896___    101 AGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCT    150
                     |....||.||||||||||||.|.||.||||||.||||.|||||||||||.
RBAM_011310__    101 AAATGATTCAGCCGTTTATGGACCTGTTTACATCGGTCATGGCGGAAGCG    150

BSNT_01896___    151 TATGAGCTTGGCAAGTCTGACGC--TAAATCTGAA-ACAGAATAA    192
                     |||||||||||||..|||||.||  ...|.||||| |   |||||
RBAM_011310__    151 TATGAGCTTGGCAGATCTGATGCCGGGGAGCTGAATA---AATAA    192


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