Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01879 and RBAM_011190
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:36
# Commandline: needle
# -asequence dna-align/BSNT_01879___argC.1.9828.seq
# -bsequence dna-align/RBAM_011190___argC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01879___argC-RBAM_011190___argC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01879___argC-RBAM_011190___argC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01879___argC
# 2: RBAM_011190___argC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1086
# Identity: 790/1086 (72.7%)
# Similarity: 790/1086 (72.7%)
# Gaps: 96/1086 ( 8.8%)
# Score: 2817.0
#
#
#=======================================
BSNT_01879___ 1 TTGAAAATAGGAATTGTAGGTGCTACAGGATATGGAGGCACCGAACTTGT 50
|||||||||||.|||.||||.||.||.||.|||||||||.||||||||||
RBAM_011190__ 1 TTGAAAATAGGTATTATAGGCGCGACTGGTTATGGAGGCGCCGAACTTGT 50
BSNT_01879___ 51 CAGGATTCTTTCGCATCATCCTCATGCAGAGGAATGCATACTTTATTCAT 100
||||||||||...|||||.|||.|||||||.||.||.|||.|.|||||||
RBAM_011190__ 51 CAGGATTCTTAACCATCACCCTTATGCAGAAGATTGTATATTATATTCAT 100
BSNT_01879___ 101 CCAGCGGAGAAGGGAATGTCTATAGCG----AGGGTTATCCTCATCT--- 143
|.||||..|||||.||.|..|||..|| | |||||.|||.|
RBAM_011190__ 101 CGAGCGACGAAGGAAAAGAATATGCCGCTTCA----TATCCGCATTTGAG 146
BSNT_01879___ 144 ---TACCGGCTTAGCG----GATCAGCAGCTGAAGCCGATTGATAT-GAA 185
|| ||||| .|||| ||..|||||.||.|||| |||
RBAM_011190__ 147 GAATA------TAGCGTCACAATCA----CTTCAGCCGCTTCATATAGAA 186
BSNT_01879___ 186 TACGATCAAACACGAAATAGATATCATGTTTCTCGCTGCGCCGCCCGGAG 235
||||||..|.|||||||.|||.|||||||..|.||.|||||||||||.|
RBAM_011190__ 187 -ACGATCCGAAACGAAATTGATGTCATGTTCATAGCCGCGCCGCCCGGCG 235
BSNT_01879___ 236 TATCAAGTGAATTGACTCCAAAGCTGGCAGACGCGGGAATTCCGGTTATT 285
|.||..|.||.|.|.|.||.||||||||.||.|||||.||||||||.|||
RBAM_011190__ 236 TTTCCGGAGAGTGGTCGCCCAAGCTGGCGGAGGCGGGCATTCCGGTCATT 285
BSNT_01879___ 286 GATCTGTCAGGTGATCTGAGGATACAAGAACCGGCTGAATATGAAAAATG 335
|||||.||.||.||||||.||||.|||.|.|||||.|..||||||||.||
RBAM_011190__ 286 GATCTATCCGGCGATCTGCGGATTCAAAACCCGGCCGTGTATGAAAAGTG 335
BSNT_01879___ 336 GTATAAACGGACAGCGGCACCGAAGGCGGTGATTCAAGAG-GCGGTATAC 384
||||||.||||..||.||.|||||.|....||||||| || |||||.|||
RBAM_011190__ 336 GTATAAGCGGAAGGCCGCTCCGAAAGGAACGATTCAA-AGCGCGGTTTAC 384
BSNT_01879___ 385 GGTCTGGCAGAACTGAATCAACTGCAA-------ATTCA-ACAGGCGAAA 426
|||.|.||.|||||| ||| || ||||| || .||.||.
RBAM_011190__ 385 GGTTTAGCTGAACTG---CAA----AAAGAAGAGATTCAGAC-TGCAAAG 426
BSNT_01879___ 427 CTCATTGCCAATCCAGGCTGTTTTCCAACAGCTGTTTTGCTTGGCCTCGC 476
||.|||||||||||.||.||||||||.||.|||||..||||.||.||.||
RBAM_011190__ 427 CTGATTGCCAATCCGGGATGTTTTCCGACGGCTGTGCTGCTCGGGCTTGC 476
BSNT_01879___ 477 GCCATTGGCTCAAAAGAAACTGCT----CGATGAATC-TTTCGTTATCGT 521
.||..|||| ||||||...||| | |.||.|| |||| |.||.||
RBAM_011190__ 477 CCCGCTGGC---AAAGAATGGGCTTTTAC-AAGATTCATTTC-TGATTGT 521
BSNT_01879___ 522 TGACGCGAAGACGGGTGTTTCCGGAGCGGGAAGAAAAGCATCCATGGGAA 571
|||.|||||.|||||.||.|||||.||.||..||||||||||||||||.|
RBAM_011190__ 522 TGATGCGAAAACGGGCGTATCCGGCGCCGGCCGAAAAGCATCCATGGGCA 571
BSNT_01879___ 572 CCCATTTTTCTGAGCTGAACGGCAATTTTAAAATTTATAAAGTCAATGAA 621
|.||||.||||||||||||.|..|||||.|||||||||||.||.|||||.
RBAM_011190__ 572 CTCATTATTCTGAGCTGAATGATAATTTCAAAATTTATAAGGTTAATGAG 621
BSNT_01879___ 622 CATCAGCACACGCCGGAAATTGAGCAG------GC-GCTGAATGAATGGC 664
||||||||.||.|||||||||||.||| || ||| ||||
RBAM_011190__ 622 CATCAGCATACTCCGGAAATTGAACAGCAATTAGCGGCT-------TGGC 664
BSNT_01879___ 665 AGCCAGGCCTCGGGCCC-ATTACATTTTCGGCTCACTTGGTTCCGATGAC 713
||||.|| |.|.||||| ||.||.|||||.|||||.||||..||||||||
RBAM_011190__ 665 AGCCCGG-CACAGGCCCGATCACGTTTTCCGCTCATTTGGCGCCGATGAC 713
BSNT_01879___ 714 AAGGGGCATCATGGCGACGATGTATAC-CAGATTAACCTGTGATCTATCC 762
|||||||||.||||||||||||||||| .|| |.|| .|||
RBAM_011190__ 714 AAGGGGCATTATGGCGACGATGTATACGGAG----------GCTC-CTCC 752
BSNT_01879___ 763 GCAGATGAC--CTGCA--------TGATTTATATTCGGAATTTTACCAAG 802
|...|||.| ||||| .||.||.|||||.|||||.|||.|||
RBAM_011190__ 753 GGGTATGTCTGCTGCACAGGTAAGAGAATTGTATTCCGAATTCTACAAAG 802
BSNT_01879___ 803 ATTCATATTTTGTGAGAGTGAGGCCAAAAGGTCAGTACCCGCAAACGAAA 852
|||||||||||||.|||.|.|||||..|||||.|.|..|||...||||||
RBAM_011190__ 803 ATTCATATTTTGTCAGAATCAGGCCGGAAGGTGAATTTCCGGCGACGAAA 852
BSNT_01879___ 853 GAAGTGTACGGCAGCAATTTCTGTGATATCGCCGTGACCCTCGATGAGAG 902
||.||.||||||||||||||.|||||||||...||.||..|.|||||.||
RBAM_011190__ 853 GAGGTATACGGCAGCAATTTTTGTGATATCAGTGTCACTGTGGATGAAAG 902
BSNT_01879___ 903 AACGAACAGAGTCACGATCGTCTCGGTAATCGATAATTTAATGAAGGGTG 952
|||.|||.|.|.|||.|||||.||.||.||.||||||.|.|||||.||.|
RBAM_011190__ 903 AACAAACCGTGCCACCATCGTTTCTGTCATAGATAATCTGATGAAAGGCG 952
BSNT_01879___ 953 CCGCCGGTCAGGCAGTGCAAAACTTTAATTTGATGAATGGCTGGAATGAA 1002
||||.||.|||||.||.|||||.||.|||.|.||||||||||||.|.|||
RBAM_011190__ 953 CCGCAGGGCAGGCGGTTCAAAATTTAAATATCATGAATGGCTGGCAGGAA 1002
BSNT_01879___ 1003 GAAACTGGACTCACCATCACGCCAATTTATCCATAG 1038
|||||.|||||.||.||.||||||.|.|||||||||
RBAM_011190__ 1003 GAAACGGGACTTACGATGACGCCAGTCTATCCATAG 1038
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