Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01876 and RBAM_011170
See
Amino acid alignment /
Visit
BSNT_01876 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:36
# Commandline: needle
# -asequence dna-align/BSNT_01876___yitY.1.9828.seq
# -bsequence dna-align/RBAM_011170___yitY.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01876___yitY-RBAM_011170___yitY.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01876___yitY-RBAM_011170___yitY.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01876___yitY
# 2: RBAM_011170___yitY
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1497
# Identity: 1070/1497 (71.5%)
# Similarity: 1070/1497 (71.5%)
# Gaps: 138/1497 ( 9.2%)
# Score: 3743.0
#
#
#=======================================
BSNT_01876___ 1 ------------TTGCTT-------------GCATTCGCGCTTTGTACTG 25
||.||| ||||||..| |||.||| |
RBAM_011170__ 1 ATGAAGAAAAAATTACTTCTCATTATCCTTAGCATTCTTG-TTTATAC-G 48
BSNT_01876___ 26 GCGCGTATGCGGCCCTGTTTGCGTACTCTGTGAACTCAGA------GCAA 69
|||| |.|.|| ||||||.|| ||.|..||..||| |||.
RBAM_011170__ 49 GCGC-TGTTCG---CTGTTTCCG----CTTTTCACAAAGAGCCGGTGCAG 90
BSNT_01876___ 70 AAAACAGACACAAGCGAGATGACGGATGTCAGCGGCCTGATGCCTGTAAA 119
.|..|||..||| |||||.|||||||||.|.||.|||||.||.||
RBAM_011170__ 91 CAGGCAGGGACA------ATGACAGATGTCAGCCGTCTCATGCCCGTGAA 134
BSNT_01876___ 120 AATAAAGCAGACAGTGAAAGGGCAGGAAGAGGAAACGCTCATT----GAC 165
|||.||||||||.||.|||||..|.||..|.|||| |||| ||.
RBAM_011170__ 135 AATTAAGCAGACGGTCAAAGGAAAAGAGAAAGAAA----CATTGGTCGAA 180
BSNT_01876___ 166 ACAGTCAAAGAGGCAAATCGAAAAAACA--TAAAAATTTCAATCGCCGGG 213
||..|.||.||.||||| ||.|||.|| |.||.||.||||||||.||.
RBAM_011170__ 181 ACGATTAAGGAAGCAAA--GAGAAAGCATCTGAAGATCTCAATCGCAGGC 228
BSNT_01876___ 214 GCCCAGCACTCCATGGGCGGCCATACATATTATGAGGACGGCATCGTTCT 263
|||||||||||.|||||||||||.||.||||||||.|||||.||||||||
RBAM_011170__ 229 GCCCAGCACTCAATGGGCGGCCAGACGTATTATGAAGACGGTATCGTTCT 278
BSNT_01876___ 264 CGACATGACGGGCTACAACAAAATCCT--GTCACTCGATCAAGAGAAGAA 311
||||||||||||||||||||||||.|| || |||||.|.|.||||.||
RBAM_011170__ 279 CGACATGACGGGCTACAACAAAATACTCGGT--CTCGACCGAAAGAAAAA 326
BSNT_01876___ 312 AACCATCAGGGTGCAAAGC-GGTGCAACGTGGAATGATATCCAGAAATAC 360
||.||||||.|||| |.|| ||.||.||||||||||||||.|||...||.
RBAM_011170__ 327 AATCATCAGAGTGC-AGGCGGGAGCGACGTGGAATGATATTCAGCGCTAT 375
BSNT_01876___ 361 GTGAATCCATACGGACTCGCGGTAAAAGTCATGCAGTCACAAAACATTTT 410
||.|||||.|||||.||||||||||||||||||||.||.|||||||||||
RBAM_011170__ 376 GTCAATCCGTACGGGCTCGCGGTAAAAGTCATGCAATCGCAAAACATTTT 425
BSNT_01876___ 411 TACAATCGGCGGATCTCTCAGCGCAAATGCACACGGACGTGATATTCGCT 460
|||.||||||||.||.||.|||||.||.||.|||||.||.|||||.||.|
RBAM_011170__ 426 TACGATCGGCGGCTCACTGAGCGCCAACGCCCACGGCCGGGATATCCGGT 475
BSNT_01876___ 461 ACGGCTCGCTGATTGATACAGTCAAATCATTTCGGCTTTTAAAAGCTGAC 510
||||.||||||||||||||.||||||||.||||..||||||||.||.|||
RBAM_011170__ 476 ACGGTTCGCTGATTGATACGGTCAAATCGTTTCATCTTTTAAAGGCGGAC 525
BSNT_01876___ 511 GGGACGATTATCACTGTCACTCCAAAAGATGATTTGTTTACGGCGGTCAT 560
||.|...|.|||||.||.|||||.||||||||..|||||.|.||.|||||
RBAM_011170__ 526 GGCAAAGTCATCACCGTTACTCCGAAAGATGACCTGTTTTCAGCCGTCAT 575
BSNT_01876___ 561 CGGAGGGTACGGCCTTTTTGGCGTGATTCTTGATGTAACGC-----TTGA 605
|||.||.||||||||.||.|||||.||.||.| |||| ||||
RBAM_011170__ 576 CGGCGGCTACGGCCTGTTCGGCGTCATCCTGG-----ACGCGGATATTGA 620
BSNT_01876___ 606 GCTGACAGATGATGAGCTGTATGTCATGAAGACAGAAA-AAATGAATTAC 654
||||||.|||||||||||.||||..|||||.|| |||| ..|||||
RBAM_011170__ 621 GCTGACGGATGATGAGCTTTATGAAATGAAAAC-GAAACGCATGAA---- 665
BSNT_01876___ 655 AGC----ACATACTCAG--ACTATTTTTCAAAGCATGTAAAAGGAAATCC 698
.|| ||||| ||| |.||||||.|..|||||||.....|.||.||
RBAM_011170__ 666 CGCTGATACATA--CAGTCAATATTTTACGCAGCATGTTCGGCGCAACCC 713
BSNT_01876___ 699 AGATGTCCGAATGCATCTGGCGCGAATTTCAACAGCGAAAAAAGGATTTC 748
.|..||.||.||||||||.|||||.||..||||||.|.|.|||||.|||.
RBAM_011170__ 714 CGCCGTGCGCATGCATCTCGCGCGGATCGCAACAGGGGATAAAGGCTTTT 763
BSNT_01876___ 749 TGAAAGACATGTATGTCACGAATTACGTATTGGCTGATCATCAGGATCAA 798
||.|.||.||||||||.||..|||||..|.|..|.||..|||||.|..||
RBAM_011170__ 764 TGCACGATATGTATGTGACTGATTACACACTCTCAGACAATCAGAAAGAA 813
BSNT_01876___ 799 ------CTGCCATCATACAGCGATCTCAAAGAAGATGAGTATACGGGAGC 842
|.|| |||..||.||.||||||||||||.|| |.||.||
RBAM_011170__ 814 TTAAAGCGGC------ACAATGAACTGAAAGAAGATGAGCAT-CCGGCGC 856
BSNT_01876___ 843 -CACAAAGTTTGCACTCGGTTTGTCAAGACGGTATGAATGGGGCAGGAAT 891
.||.||.||.||.|||||..|.||..|.||||||||.|||||.||.|||
RBAM_011170__ 857 TGACGAAATTCGCGCTCGGCCTCTCCCGCCGGTATGACTGGGGAAGAAAT 906
BSNT_01876___ 892 TGGCTGTGGGACACACAGCAATCCTATTTCCTGAGCCAAAACGGCACAGA 941
|||.|.|||...||.|||||.||.|||||.||.|||||||||||| |.
RBAM_011170__ 907 TGGTTCTGGTCAACCCAGCAGTCTTATTTTCTCAGCCAAAACGGC---GT 953
BSNT_01876___ 942 GA---TTTCACGCAATAACGTCATGCGGTCCGAATCAAAGTTTCTTGAGT 988
|| |.||..|.||.||.|||||||||||.|||||.||.|||.|.||.|
RBAM_011170__ 954 GAAAGTCTCCAGGAACAATGTCATGCGGTCAGAATCGAAATTTTTGGAAT 1003
BSNT_01876___ 989 ATGAAAACAATGACAACACAGATGTTTTGCAAGAATACTTTGTGCCCGT- 1037
|||||||||..||||||||.||.||..|||||||||||||.||||||||
RBAM_011170__ 1004 ATGAAAACACGGACAACACCGACGTGCTGCAAGAATACTTCGTGCCCGTC 1053
BSNT_01876___ 1038 ---GAAGGAGTATGGGTCCTATATTGATGACCTGAGACAA-ACGCTGTCG 1083
||| |.||.|.|.||.|||.|||| .|.|..||| ||||||||.
RBAM_011170__ 1054 GGCGAA----TTTGCGCCGTACATTCATGA-TTTACGCAAGACGCTGTCA 1098
BSNT_01876___ 1084 GACGAAGATCTGAACCTGCTGAACATTACGATCCGCTACGTGCAGAAAAA 1133
.|.||||||||.||.||..|.||.||||||||||||||||||||.|||||
RBAM_011170__ 1099 CATGAAGATCTCAATCTCGTAAATATTACGATCCGCTACGTGCAAAAAAA 1148
BSNT_01876___ 1134 TGAAAAGGCCGACCTTTCCTATGCGAAGGACGATATGTTTTCGCTCGTGC 1183
||||||.|||||.||.||.||.||.|||||.||.||||||||.|||||.|
RBAM_011170__ 1149 TGAAAAAGCCGATCTGTCATACGCAAAGGAAGACATGTTTTCACTCGTTC 1198
BSNT_01876___ 1184 TATTAATAAACGAGGGCTTTTCAAAAGA-AGACCAGGCAGA-TACTGCCC 1231
|.|||||.|||||.||.||||||||||| || |||||| || ..|.||.|
RBAM_011170__ 1199 TTTTAATCAACGAAGGGTTTTCAAAAGACAG-CCAGGC-GAGCGCGGCGC 1246
BSNT_01876___ 1232 GAATCATCAGGCACATGACAGA-----CGTTGCCATCAAG-CACGGCGGC 1275
|.||..||||..|.|||||.|| |.|||| | |||.|||||
RBAM_011170__ 1247 GGATTGTCAGAAAAATGACGGATACGGCATTGC------GCCACCGCGGC 1290
BSNT_01876___ 1276 AGCTATTATCTGCCTTATATGACCTACCAGACAAAAGCGCAAATGAGACA 1325
||.||||||||.||.||||||...||.||.||.||||.|||.|||.|..|
RBAM_011170__ 1291 AGTTATTATCTCCCGTATATGCTGTATCAAACGAAAGAGCAGATGCGCGA 1340
BSNT_01876___ 1326 GGCATATCCGAAAAGTGAAGCGTTTTTTCAGAAAAAACGAACCTATGACC 1375
|||||||||||||||.||...|||.|||||||||||||..|..|||||.|
RBAM_011170__ 1341 GGCATATCCGAAAAGCGATATGTTCTTTCAGAAAAAACACAAATATGATC 1390
BSNT_01876___ 1376 CGGATGAGCGCTTTATGAATTACTTTTATCAGAGGTATAAATAA--- 1419
|||||||....|||||||||||.||||||||||||||.||||.|
RBAM_011170__ 1391 CGGATGACTTGTTTATGAATTATTTTTATCAGAGGTACAAATCATGA 1437
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.