Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01867 and RBAM_011100
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:35
# Commandline: needle
# -asequence dna-align/BSNT_01867.1.9828.seq
# -bsequence dna-align/RBAM_011100___ipi.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01867-RBAM_011100___ipi.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01867-RBAM_011100___ipi.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01867
# 2: RBAM_011100___ipi
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 490
# Identity: 312/490 (63.7%)
# Similarity: 312/490 (63.7%)
# Gaps: 62/490 (12.7%)
# Score: 894.0
#
#
#=======================================
BSNT_01867 1 GTGAAACGGCTGCTTGTGATGCTCCTCCCCGTGCTGCTTTTGATAGGCTG 50
.||||..|||||.|||...||.|..|.||.||..|..|.|||||.||.||
RBAM_011100__ 1 ATGAAGTGGCTGTTTGGCCTGTTATTACCGGTCATTTTATTGATCGGATG 50
BSNT_01867 51 CGGGA---AAGATGAGCAGACAGAACCCGATAAGGAGGTATCAGGCG--- 94
|.|.| ||...|.|||||..||.||||.|.||||||||||.||.|
RBAM_011100__ 51 CAGCAGTCAATCCGGGCAGAAGGAGCCCGCTGAGGAGGTATCCGGAGAGA 100
BSNT_01867 95 -GAATGGAGAATCAAGAGGTTGTTTTATCTATT-GACGCAA------TTC 136
|||| ||..|.||||.|| .||| |.||.|| |.|
RBAM_011100__ 101 TGAAT-GAACAGCAAGCGG----------AATTAGCCGTAAACCCTGTGC 139
BSNT_01867 137 AGGAGCCTGAACAAATCAAGTTTAACATGTCGCTGAAGAACCAAAGTGAA 186
||..|..|.|.||.|||.|.|||.|.|||||..|.||.|||.|.||.|..
RBAM_011100__ 140 AGACGGATCAGCAGATCGAATTTCAAATGTCTTTAAAAAACAAGAGCGGC 189
BSNT_01867 187 CGTGCTATTGAGTTTCA-ATTCAGCACAGGGCAAAAATTTGAACTTG-TC 234
.|..|.||.|| ||||| |||||||.|||||||.|||||.||| ||| .|
RBAM_011100__ 190 AGCCCGATCGA-TTTCACATTCAGCTCAGGGCAGAAATTCGAA-TTGACC 237
BSNT_01867 235 GTGTATGATTCTGAGCACAAAGAAAGATACCGTTATTCGAAAGACAAAAT 284
||..||||.....|.|||||||||...|||||.|||||.|||||||||||
RBAM_011100__ 238 GTACATGACCAACATCACAAAGAACTGTACCGCTATTCAAAAGACAAAAT 287
BSNT_01867 285 GTTTACGCAGGCTTTTCAAAACCTGACGCTT------GAATCTGGAGAAA 328
||||||.|||||.|||||.|.|.|||| ||| |||| ||||
RBAM_011100__ 288 GTTTACTCAGGCGTTTCAGACCGTGAC-CTTAATGCCGAAT-----GAAA 331
BSNT_01867 329 CATATGATTTCTCTGATGTGTGGAAGGAAGTCCCTGAGCCCGGAACCTAT 378
|.|||||.||.||.||||||||||||.|.||.||||..||.|||||.||.
RBAM_011100__ 332 CGTATGACTTTTCAGATGTGTGGAAGAACGTGCCTGGTCCGGGAACATAC 381
BSNT_01867 379 GAGGTAAAGGTGAC-ATTTAAGGG---------CAGGGCGGAAAA--TCT 416
..|||.|.|||||| .|||.|||| |||..||||||| .||
RBAM_011100__ 382 ACGGTGACGGTGACGTTTTTAGGGAAGTCCGATCAGATCGGAAAAAGACT 431
BSNT_01867 417 CAAGCAGGTTCAGGCTGTTCAGCAGTTTGAAGTCAAATAA 456
.||...|||..| |.|| ||||||||.||||||
RBAM_011100__ 432 GAAAACGGTAAA--------AACA-TTTGAAGTGAAATAA 462
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