Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01843 and RBAM_010970
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:34
# Commandline: needle
# -asequence dna-align/BSNT_01843___yisQ.1.9828.seq
# -bsequence dna-align/RBAM_010970___yisQ.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01843___yisQ-RBAM_010970___yisQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01843___yisQ-RBAM_010970___yisQ.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01843___yisQ
# 2: RBAM_010970___yisQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1378
# Identity: 1095/1378 (79.5%)
# Similarity: 1095/1378 (79.5%)
# Gaps: 20/1378 ( 1.5%)
# Score: 4318.0
#
#
#=======================================
BSNT_01843___ 1 ATGAAACAAGCTGTCTTCAAATCAACTGCTTTGAAAAAACCCGCTGA-CA 49
|||||||||||..|.||.|||....||||.||.|||.||.||.|||| ||
RBAM_010970__ 1 ATGAAACAAGCGATTTTAAAACGGGCTGCGTTCAAACAATCCTCTGATCA 50
BSNT_01843___ 50 -AAACGTTCTCATTATTTTCGCTTACTTGGCCGATCTTTATTGAGGTCTC 98
|||| |||||||||...||||.|||||||||||.|||||||||||.||
RBAM_010970__ 51 CAAAC--TCTCATTATACGCGCTGACTTGGCCGATATTTATTGAGGTTTC 98
BSNT_01843___ 99 ATTATATATGTTTATGGGTAATGCCGATACACTGATGCTCAGCCAATACT 148
||||||||||||||||||.||.|||||.||.||.|||||.||||||||||
RBAM_010970__ 99 ATTATATATGTTTATGGGAAACGCCGACACTCTTATGCTTAGCCAATACT 148
BSNT_01843___ 149 CGGATAACAGCGTGGCAGCAGTCGGCGTCAGCAACCAGATTTTAAATTTA 198
|.||.|||||.|||||.||.||.||.||||||||.|||||||||||||||
RBAM_010970__ 149 CTGACAACAGTGTGGCGGCCGTGGGTGTCAGCAATCAGATTTTAAATTTA 198
BSNT_01843___ 199 ATTATCGTGATGTTCAGCTTTATCGCAACAGGAACGACCGTTATCATTTC 248
|||||||||||||||||||||||||||||.||.|||||..||.|.|||||
RBAM_010970__ 199 ATTATCGTGATGTTCAGCTTTATCGCAACGGGTACGACAATTGTGATTTC 248
BSNT_01843___ 249 ACAATTTCTAGGCTCACGGCAAAAGAAAGAAGC-CATGGAAGTCGCTTAT 297
|||.|||.|||||||....||.||.|||||.|| || ||||||.||||||
RBAM_010970__ 249 ACAGTTTTTAGGCTCTAAACAGAAAAAAGAGGCGCA-GGAAGTGGCTTAT 297
BSNT_01843___ 298 GTGTCAATCGGCGCCAACTTCTTCATCAGCCTGGCCATTAGCGCCATCGT 347
||.|||||.||.||.|||||..|||||||.||.|||||.||||||..|.|
RBAM_010970__ 298 GTATCAATAGGAGCGAACTTTGTCATCAGTCTCGCCATCAGCGCCGCCAT 347
BSNT_01843___ 348 CTTTTTCGCGGCTGTCCCTCTGCTTCATATGATGGGATTATCAGACGCAC 397
.|||||.|||||.||.||.|||||||||.|||||||..|.||..|.|.|.
RBAM_010970__ 348 ATTTTTTGCGGCCGTTCCGCTGCTTCATGTGATGGGTCTTTCCAATGAAT 397
BSNT_01843___ 398 TGATGCCTGATGCGAAAGTCTTTTTACAAGTTGTCGGAGGTCTGTCCTTT 447
|||||||.|||||.|||||||||||.||.||.|||||.||.||||||||.
RBAM_010970__ 398 TGATGCCGGATGCCAAAGTCTTTTTGCAGGTGGTCGGCGGGCTGTCCTTC 447
BSNT_01843___ 448 ATTCAGGCTTTAATCATGACATTCAGCGCGATCTTAAAAAGCTATGGCTA 497
|||||||||||.||.|||||.||||||||.||.||||||||||||||..|
RBAM_010970__ 448 ATTCAGGCTTTGATTATGACGTTCAGCGCCATTTTAAAAAGCTATGGTCA 497
BSNT_01843___ 498 TACAAAAGATACAATGTTTGTCACTATCGGCATGAACATTTTAAACATTG 547
|||.||.|||||.|||||.||.||.|||||.|||||.||||||||.||||
RBAM_010970__ 498 TACGAAGGATACGATGTTCGTTACGATCGGGATGAATATTTTAAATATTG 547
BSNT_01843___ 548 CCGGAAACTTTGTTGTGATTTTTGGTTTGTTCGGCTTTCCTGTTCTCGGC 597
|||||||||||.||||.|||||.||...|.|||||.||||.||..|.|||
RBAM_010970__ 548 CCGGAAACTTTCTTGTCATTTTCGGGCCGCTCGGCCTTCCGGTGTTAGGC 597
BSNT_01843___ 598 GTTGCCGGTGTGGCCATGTCCACATCTATCGCCCGCGTCATCGGATTAAT 647
||.||||||||.||.|||||.||.||..||||.||..|||||||..|.||
RBAM_010970__ 598 GTCGCCGGTGTTGCGATGTCAACGTCCTTCGCGCGGATCATCGGGCTGAT 647
BSNT_01843___ 648 CGCGATGATTGTGATTGTCAACAAACGCAT-----TCAG-CTGAAGATGT 691
.||||||||||||||.|||||.|||||||| ||.| ||| |.|||.
RBAM_010970__ 648 TGCGATGATTGTGATCGTCAAAAAACGCATCGGACTCGGTCTG-ACATGG 696
BSNT_01843___ 692 CGCTGAAAAAAG-TCTTTCATATGCATAAAGAACATTTGCGCAAGCTGCT 740
| ||||| |.|||||..|.||||||||.||.|||||.||.||.||
RBAM_010970__ 697 C------AAAAGATTTTTCACGTCCATAAAGAGCACTTGCGGAAACTCCT 740
BSNT_01843___ 741 GAAAATCGGCATTCCTTCTGCGGGAGAGCAGCTTTCATACAACCTTTCGC 790
|||||||||.|||||.|||||.||.||.|||||.||.||||||.||||||
RBAM_010970__ 741 GAAAATCGGGATTCCGTCTGCCGGCGAACAGCTGTCTTACAACATTTCGC 790
BSNT_01843___ 791 AAATGATTGTCACGTATTTTATCGCGATCATGGGCGCGCAGGCGTTGACA 840
|||||.|||||||.|||||||||||.||.||||||||.||||||.|.|||
RBAM_010970__ 791 AAATGGTTGTCACTTATTTTATCGCCATTATGGGCGCTCAGGCGCTTACA 840
BSNT_01843___ 841 ACAAAAGTGTATACGCAAAATATTACGATGTTTATTTTGCTGTTCGGCAC 890
|||||.||.|||||.|||||.||.||.||||||||..||||||||||.||
RBAM_010970__ 841 ACAAAGGTTTATACACAAAACATCACCATGTTTATCCTGCTGTTCGGAAC 890
BSNT_01843___ 891 TGCGATCAGCCAGGGTACACAAATCTTAATCGGCCGTTATATCGGCGGCA 940
.||.|||||||||||.|||||.||.||.||||||.|.||||||||||.||
RBAM_010970__ 891 GGCAATCAGCCAGGGCACACAGATTTTGATCGGCAGATATATCGGCGCCA 940
BSNT_01843___ 941 AACAATTTGATGCCGCTTATGAGCGCTGCATGAAGAGCTTATATTGGGCA 990
|||..|||||.|.|||||||||.|||||||||||.||..|.||.|||||.
RBAM_010970__ 941 AACGGTTTGACGACGCTTATGACCGCTGCATGAAAAGTCTGTACTGGGCG 990
BSNT_01843___ 991 CTCGGAATTGCTGCGGCTACCTCTGTTTTGATGACGATCTTTTCAAAAGA 1040
||.||.|||||.||....||.||.||..|.|||||..|.||||||||..|
RBAM_010970__ 991 CTTGGCATTGCCGCTTTGACATCCGTGATCATGACTTTGTTTTCAAAGCA 1040
BSNT_01843___ 1041 CCTGATCGGACTCTTCACACAAAGCCCTGACATTATAGCAACTGCAAGCC 1090
.|||||||||.|.||||||...||||||||||||||.||.||.||.|||.
RBAM_010970__ 1041 GCTGATCGGAATTTTCACAAGCAGCCCTGACATTATTGCGACGGCGAGCA 1090
BSNT_01843___ 1091 TATTGATTGCCATGACCATTATCCTTGAACCAGGCCGCTCGTTTAATGTC 1140
|..||||.||||||||.||.||.|||||.||.|||||.||.||.||||||
RBAM_010970__ 1091 TGCTGATCGCCATGACGATCATTCTTGAGCCCGGCCGTTCATTCAATGTC 1140
BSNT_01843___ 1141 ATTATCATTAACTCTCTGCGGGCCGCGGGGGATGCGAAATTCCCGGTTTA 1190
||||||||.|||||.||||||||.||.||.|||||.|||||.||.||.||
RBAM_010970__ 1141 ATTATCATCAACTCGCTGCGGGCTGCCGGAGATGCAAAATTTCCCGTCTA 1190
BSNT_01843___ 1191 CATGGCGATGATTTCAATGTGGGGCATTGGCCTCCCGCTTGCTTATCTTT 1240
|||||||||||||||.||||||||.||.||.||.||.||.||||||||.|
RBAM_010970__ 1191 CATGGCGATGATTTCCATGTGGGGTATCGGACTGCCTCTCGCTTATCTGT 1240
BSNT_01843___ 1241 TTGGCATCCACCTCGGTTTCGGTCTTGCCGGTATTTGGATTTCTTTTATC 1290
|.||||||||..||||.||.||.|||...||.||.||||||||.||||||
RBAM_010970__ 1241 TCGGCATCCATTTCGGATTAGGGCTTATGGGCATCTGGATTTCATTTATC 1290
BSNT_01843___ 1291 GCGGATGAATGGGTCCGGGGAATCTTAATGTACAGAAGATGGCGCTCACG 1340
|||||||||||||||.|.||.|||.|.|||||||||||||||||.||.||
RBAM_010970__ 1291 GCGGATGAATGGGTCAGAGGCATCCTTATGTACAGAAGATGGCGGTCGCG 1340
BSNT_01843___ 1341 TATCTGGATTCAAAAAGGTATGGCGTAA 1368
.||.||||||||||||||.||.||.|||
RBAM_010970__ 1341 GATTTGGATTCAAAAAGGGATTGCATAA 1368
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