Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01839 and RBAM_010950
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:34
# Commandline: needle
# -asequence dna-align/BSNT_01839___asnO.1.9828.seq
# -bsequence dna-align/RBAM_010950___asnO.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01839___asnO-RBAM_010950___asnO.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01839___asnO-RBAM_010950___asnO.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01839___asnO
# 2: RBAM_010950___asnO
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1867
# Identity: 1454/1867 (77.9%)
# Similarity: 1454/1867 (77.9%)
# Gaps: 47/1867 ( 2.5%)
# Score: 5602.0
#
#
#=======================================
BSNT_01839___ 1 ATGTGTGGAATTACGGGTTGGGTCGATTTTAAAAAGCAGCTCGTCCAGGA 50
||||||||||||.|||||||||||||||||.||||||||||||||||.||
RBAM_010950__ 1 ATGTGTGGAATTGCGGGTTGGGTCGATTTTCAAAAGCAGCTCGTCCAAGA 50
BSNT_01839___ 51 AAAACAAACGATGGACAGAATGACAGACACTCTTTCCAAACGAGGGCCTG 100
.|||||.|..|||.|||..||||.||||||||||||.|||||||||||||
RBAM_010950__ 51 GAAACATATTATGAACAATATGATAGACACTCTTTCAAAACGAGGGCCTG 100
BSNT_01839___ 101 ATGATTCAAACGTTTGGGGGGAGCACCATGTTTTATTCGGACATAAAAGA 150
|||||||||||||.|||||.||||.|||||||||||||||||||||||||
RBAM_010950__ 101 ATGATTCAAACGTCTGGGGAGAGCCCCATGTTTTATTCGGACATAAAAGA 150
BSNT_01839___ 151 CTTGCAGTTGTTGATATTGAAGGAGGACGCCAGCCGATGGCGTGTACCTA 200
|||.|.||.|||||.||||||||.||.||||||||||||||.||.||..|
RBAM_010950__ 151 CTTTCGGTCGTTGACATTGAAGGCGGCCGCCAGCCGATGGCCTGCACGCA 200
BSNT_01839___ 201 TAAAGGGGATACGTACACCATTATTTACAATGGCGAGCTGTATAACACGG 250
|.|||.|||.|||||||||||.|||||.||||||||||||||||||||||
RBAM_010950__ 201 TCAAGAGGAAACGTACACCATCATTTATAATGGCGAGCTGTATAACACGG 250
BSNT_01839___ 251 AAGATTTGCGCAAAGAATTGCGGGCGCGGGGCCATCAATTCGAGCGTACG 300
|.||.|||||.||.||..|.|.||||.|||||||.|..||.|||.|.||.
RBAM_010950__ 251 AGGAATTGCGGAAGGAGCTTCAGGCGAGGGGCCACCGTTTTGAGAGGACC 300
BSNT_01839___ 301 TCAGATACCGAGGTGCTTCTGCACAGCTACATCGAGTGGCAGGAAGACTG 350
||.|||||.||.|||||.|||||||||||.||.|||||||.|||.||.||
RBAM_010950__ 301 TCTGATACTGAAGTGCTGCTGCACAGCTATATTGAGTGGCGGGAGGAGTG 350
BSNT_01839___ 351 TGTCGACCATCTCAATGGCATATTCGCTTTCGCTGTGTGGGATGAAAAGC 400
.||.||||...|.||.||.||.||||||||.||..|.|||||||||||||
RBAM_010950__ 351 CGTGGACCGCTTGAACGGTATTTTCGCTTTTGCCATCTGGGATGAAAAGC 400
BSNT_01839___ 401 GTAATCTGCTGTTTGCCGCGAGAGACCGTCTCGGTGTAAAGCCGTTTTTT 450
|.||.|.||||||.|..||.||||||||.|||||.||.||.|||||||||
RBAM_010950__ 401 GCAAGCGGCTGTTCGGGGCAAGAGACCGGCTCGGCGTCAAACCGTTTTTT 450
BSNT_01839___ 451 TACACGAAGGAA---GGCTCTTCATTTCTCTTCGGGTCGGAAATCAAAGC 497
|| .||.||| ||||||||.|||||.||.|||||||||.|.|||||
RBAM_010950__ 451 TA---TAAAGAACACGGCTCTTCCTTTCTGTTTGGGTCGGAATTGAAAGC 497
BSNT_01839___ 498 AATCCTCGCGCACCCTGATATAAAAGCGCGAGTGGACAGAACG--GGACT 545
.|||||.||.||.||||||.|.|||||.||....||||| || |||||
RBAM_010950__ 498 CATCCTTGCTCATCCTGATGTGAAAGCCCGCACAGACAG--CGGCGGACT 545
BSNT_01839___ 546 TTCTGAAATTTTCGGTCTTGGACCGTCCAGAACCCCGGGCACTGGCATAT 595
|.|.|||.|.|||||.||.||.|||||||||||.||||||...||..|.|
RBAM_010950__ 546 TGCGGAAGTATTCGGACTCGGGCCGTCCAGAACTCCGGGCTGCGGAGTGT 595
BSNT_01839___ 596 TTAAAGGTATAAAAGAAATCCGCCCGGCTCATGCGCTGACATTTTCCAAA 645
|||||||.||..|.||..|.||.||.||.||||||.|.||.||.||.||.
RBAM_010950__ 596 TTAAAGGAATCCACGAGGTGCGTCCCGCCCATGCGTTCACTTTCTCAAAG 645
BSNT_01839___ 646 GACGGACTTAAT--ATTTGGCGTTATTGGAATGTTGAAAGCGAAAAACAT 693
||||| ||..| ||.|||||||||||||||||..|.||||||||.|||
RBAM_010950__ 646 GACGG--TTTGTCCATATGGCGTTATTGGAATGTAAAGAGCGAAAAGCAT 693
BSNT_01839___ 694 ACGGACAGTTTTGATGACACGGTTGCCAATGTCAGA-TCG----TTATTT 738
||.|||||.||.|||||.||.|..|| |||.| ||| ||||||
RBAM_010950__ 694 ACAGACAGCTTGGATGAAACCGCGGC-----TCACATTCGGTACTTATTT 738
BSNT_01839___ 739 CAGGACGCGGTGACGCGGCAGCTTGTGTCGGATGTGCCTGTTTGCACATT 788
|||||.||.|||||.||.|||||.||.||.||.|||||.||||||||.||
RBAM_010950__ 739 CAGGATGCAGTGACACGCCAGCTCGTATCTGACGTGCCGGTTTGCACGTT 788
BSNT_01839___ 789 CCTATCAGGCGGTCTGGACTCAAGCGCAATTACAGCGATTGCGGCGGGCC 838
..|||||||.||.||.||.||.|||||.||.||.|||||.||.||.|..|
RBAM_010950__ 789 TTTATCAGGGGGGCTTGATTCGAGCGCGATAACCGCGATAGCCGCCGCTC 838
BSNT_01839___ 839 ATTTTGAAAAGGAAGGAAAAGCACCGCTTCATACTTATTCGATTGATTAC 888
|||||||.||..||||.|.||..||.||||||||||||||.||||||||.
RBAM_010950__ 839 ATTTTGAGAAACAAGGCAGAGATCCCCTTCATACTTATTCAATTGATTAT 888
BSNT_01839___ 889 GAAGAGAACGATAAATTTTTTCAAGCAAGCGCTTTTCAGCCGAATGATGA 938
||.||||||...|||||||||.||||.|||||.|||||||||||||||||
RBAM_010950__ 889 GAGGAGAACAGCAAATTTTTTAAAGCGAGCGCCTTTCAGCCGAATGATGA 938
BSNT_01839___ 939 CGGACCATGGATTGAAAAAATGACAGAGGCTTTCGGCACAACGCACCACA 988
|||.||.|||||.||.|||||||||.|.||.|||||||||..|||.||.|
RBAM_010950__ 939 CGGCCCGTGGATCGATAAAATGACAAATGCATTCGGCACACAGCATCATA 988
BSNT_01839___ 989 AATGCGTCATCA-GCCAAAAAGAT---CTCATTGATCATTTGGAGGAAGC 1034
|.|||||.||.| || |.||| ||..||||.|||.||||||||.|
RBAM_010950__ 989 AGTGCGTGATTACGC----AGGATCAGCTGGTTGAACATCTGGAGGAATC 1034
BSNT_01839___ 1035 TGTACTGGTCAAAGACTTGCCGGGAATGGCGGATGTCGACTCATCCCTGC 1084
.||.||.||||.||||.|||||||.|||||.|||||.||.||.||.||..
RBAM_010950__ 1035 CGTTCTCGTCAGAGACCTGCCGGGCATGGCTGATGTTGATTCCTCGCTAT 1084
BSNT_01839___ 1085 TGTGGTTTTGCCGGGAAATCAAAAAGGACTTTGTCGTCAGCCTATCGGGA 1134
|.|||||.|||||||||||.|||||.||.||||||||.|||||.||.|||
RBAM_010950__ 1085 TATGGTTCTGCCGGGAAATTAAAAAAGATTTTGTCGTGAGCCTTTCCGGA 1134
BSNT_01839___ 1135 GAGTGCGCGGATGAGATTTTCGGCGGGTACCCGTGGTTCCATA---CGGC 1181
||.||.|||||.||.|||||||||||.||.||||||||.||.| ||||
RBAM_010950__ 1135 GAATGTGCGGACGAAATTTTCGGCGGATATCCGTGGTTTCACACCGCGGC 1184
BSNT_01839___ 1182 AGATGTTGAGTCTGGCTTTCCATGGATGAGATCAACGGAGGAGCGGATCA 1231
|||.|..|| .||.|||||.||||||||.||.||.||||||.||||||
RBAM_010950__ 1185 AGAAGAAGA---CGGATTTCCTTGGATGAGGTCGACTGAGGAGAGGATCA 1231
BSNT_01839___ 1232 AGCTGCTT-TCTGACTCATGGCAGAAAAAATTGAATCTGAAAGAATACGT 1280
.||| ||| ..|||....|||||.|||....|||||||.|.|||||||||
RBAM_010950__ 1232 CGCT-CTTGGATGAAAAGTGGCAAAAACGGCTGAATCTTAGAGAATACGT 1280
BSNT_01839___ 1281 AAATGCCAAATATGAAGAAACCTTGGCAGAAACGCCATTATTAGATGGTG 1330
.|||||.|.|||||||||||||.|.||.||||||||..|.|||||.||||
RBAM_010950__ 1281 GAATGCGAGATATGAAGAAACCATTGCGGAAACGCCGCTGTTAGACGGTG 1330
BSNT_01839___ 1331 AAACGGGTGTGGATAAAGCAAGAAGACAGCTGTTCTATTTAAATATGCTT 1380
|.|||||....||||||||.|||.|.||||||||.||.||||||||||||
RBAM_010950__ 1331 AGACGGGAACAGATAAAGCGAGACGGCAGCTGTTTTACTTAAATATGCTT 1380
BSNT_01839___ 1381 TGGTTTATGACGAACCTTTTGGATCGGAAGGATCGCATGAGCATGGGGGC 1430
|||||||||||.||.||..|.||.||.||.||.||.|||||||||||.||
RBAM_010950__ 1381 TGGTTTATGACAAATCTGCTCGACCGCAAAGACCGAATGAGCATGGGCGC 1430
BSNT_01839___ 1431 GAGCCTGGAAGTGCGGGTGCCGTTCGCCGATCACCGGCTTGTGGAATATG 1480
.||.||.|||||.|||||||||||||||||.|||.|.|||||||||||.|
RBAM_010950__ 1431 AAGTCTTGAAGTACGGGTGCCGTTCGCCGACCACAGACTTGTGGAATACG 1480
BSNT_01839___ 1481 TTTGGAATATTCCGTGGGAAATGAAAATGCATGATAATCGGGAAAAAGGC 1530
|||||||||||||.|||||||||||||||||||..|..||||||||||||
RBAM_010950__ 1481 TTTGGAATATTCCTTGGGAAATGAAAATGCATGGCAGCCGGGAAAAAGGC 1530
BSNT_01839___ 1531 ATTTTACGCAAAGCGCTTGAAGGTATTTTGCCTGATGACATTCTGTATCG 1580
||.||.||.||||||||||||||..|..|.|||||.||.|||.||||.||
RBAM_010950__ 1531 ATCTTGCGAAAAGCGCTTGAAGGACTGCTTCCTGAAGATATTTTGTACCG 1580
BSNT_01839___ 1581 CAAAAAAAGCCCGTATCCGAAAACACATCATCCGGAATATACAAAAGGCG 1630
||||||||||||.|||||||||||.|||||.|||.||||.||..|.||.|
RBAM_010950__ 1581 CAAAAAAAGCCCTTATCCGAAAACGCATCACCCGAAATACACGCAGGGGG 1630
BSNT_01839___ 1631 TCAGCGAATGGCTGAAAACGA--TCAGAAGCCAAAAGGACTCCGTGCTCC 1678
|||..|||||||||||||||| |.|.|| ||.||.||.||||||||.|
RBAM_010950__ 1631 TCACAGAATGGCTGAAAACGATTTTACAA--CAGAAAGATTCCGTGCTTC 1678
BSNT_01839___ 1679 ATACCTTGCTGGACAGAAAACAATTAGATCAGCTTTTAGAAACGGAAGGC 1728
|.|||.||||.||||||||..|..|.||...|||..|.||.||.|||||.
RBAM_010950__ 1679 ACACCCTGCTTGACAGAAAGAAGCTGGAAATGCTGCTGGAGACAGAAGGT 1728
BSNT_01839___ 1729 TCCTCCTTCAAGGTGCCGTGGTTCGGACAGCTCATGAAGGGACCTCAGCT 1778
||.||.||..||||.|||||||||||.|||||.|||||.||.||.|||||
RBAM_010950__ 1729 TCATCTTTTCAGGTCCCGTGGTTCGGCCAGCTGATGAAAGGCCCGCAGCT 1778
BSNT_01839___ 1779 GATCGCCCATCTTGCTCAAATTCATACATGGTTTGAAGCGTATCGCATTG 1828
|||||||||||||||.||.||.||||||||||||||.|||||.||.||.|
RBAM_010950__ 1779 GATCGCCCATCTTGCCCAGATCCATACATGGTTTGAGGCGTACCGTATCG 1828
BSNT_01839___ 1829 ATATTGATGAAGGATAA 1845
|||| .||||.||||
RBAM_010950__ 1829 ATAT---AGAAGAATAA 1842
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