Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01826 and RBAM_010890
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:33
# Commandline: needle
# -asequence dna-align/BSNT_01826___gerPA.1.9828.seq
# -bsequence dna-align/RBAM_010890___gerPA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01826___gerPA-RBAM_010890___gerPA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01826___gerPA-RBAM_010890___gerPA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01826___gerPA
# 2: RBAM_010890___gerPA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 223
# Identity: 175/223 (78.5%)
# Similarity: 175/223 (78.5%)
# Gaps: 2/223 ( 0.9%)
# Score: 671.0
#
#
#=======================================
BSNT_01826___ 1 ATGCCGGCCATTGTCGGAGCGTTTAAAATTAATGCGATTGGTACGAGCGG 50
|||||.||.||||||||||||||||||||||||||..|.|||||||||||
RBAM_010890__ 1 ATGCCCGCAATTGTCGGAGCGTTTAAAATTAATGCCGTCGGTACGAGCGG 50
BSNT_01826___ 51 AGTCGTTCACATCGGGGACTGCATTACGATTTCTCCTCAGGCTCAGGTCA 100
|||||||||.||.||.||||||||.||.||||||||..|.||..||||.|
RBAM_010890__ 51 AGTCGTTCATATAGGCGACTGCATCACCATTTCTCCAAAAGCAGAGGTTA 100
BSNT_01826___ 101 GAACGTTTGCCGGTGCTGGCAGCTTTAATACCGGCGACAGCCTCAAGGTG 150
..||.||||||||.||.||||||||.||||||||.||||..||||...||
RBAM_010890__ 101 AGACATTTGCCGGAGCGGGCAGCTTCAATACCGGAGACAATCTCACACTG 150
BSNT_01826___ 151 ATGAATTATCA-AAACACGACGAATGTGTATGACAATGATGCGGTTGATC 199
|.|||||| || .||..|.|||||||||||.||.|||||||...|.||||
RBAM_010890__ 151 ACGAATTA-CAGGAATTCAACGAATGTGTACGATAATGATGTAATCGATC 199
BSNT_01826___ 200 AGCCGATCGTGGCCAATGCGTAA 222
|||||||.|..|..||.||.|||
RBAM_010890__ 200 AGCCGATGGCAGGAAACGCATAA 222
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