Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01821 and RBAM_010860
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:33
# Commandline: needle
# -asequence dna-align/BSNT_01821___gerPD.1.9828.seq
# -bsequence dna-align/RBAM_010860___gerPD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01821___gerPD-RBAM_010860___gerPD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01821___gerPD-RBAM_010860___gerPD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01821___gerPD
# 2: RBAM_010860___gerPD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 177
# Identity: 140/177 (79.1%)
# Similarity: 140/177 (79.1%)
# Gaps: 0/177 ( 0.0%)
# Score: 552.0
#
#
#=======================================
BSNT_01821___ 1 ATGATCTTTACAGTCATCAACCGCAGCTTGGAAGTCGGGGACATCCGGAT 50
|||||.||||||||.||.|||||.|...|.||||||||.|||||||||..
RBAM_010860__ 1 ATGATTTTTACAGTGATTAACCGGAATATTGAAGTCGGCGACATCCGGTC 50
BSNT_01821___ 51 GAACGGTGTGTCCAGTTCCTCCGTTTTCCACATCGGAGACACTGAATCCA 100
.|.|||||||||||||||.|||.|.||....|||||.|||||.||.|||.
RBAM_010860__ 51 TACCGGTGTGTCCAGTTCTTCCTTATTATTAATCGGCGACACCGATTCCG 100
BSNT_01821___ 101 TCTACCTGTCTTCTATTTTTGATACACCGCCTGAATCTCTTATTATCGGG 150
||||.||||||||.||.|||||.||.||.||.||||||||||||||||||
RBAM_010860__ 101 TCTATCTGTCTTCCATCTTTGACACGCCTCCGGAATCTCTTATTATCGGG 150
BSNT_01821___ 151 CCGTTTGTTCCGATTGCGCCAGAATAA 177
||.|.|||.|||.|.|||||.||||||
RBAM_010860__ 151 CCTTATGTGCCGCTGGCGCCGGAATAA 177
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