Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01819 and RBAM_010840
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:33
# Commandline: needle
# -asequence dna-align/BSNT_01819___gerPF.1.9828.seq
# -bsequence dna-align/RBAM_010840___gerPF.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01819___gerPF-RBAM_010840___gerPF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01819___gerPF-RBAM_010840___gerPF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01819___gerPF
# 2: RBAM_010840___gerPF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 219
# Identity: 196/219 (89.5%)
# Similarity: 196/219 (89.5%)
# Gaps: 0/219 ( 0.0%)
# Score: 888.0
#
#
#=======================================
BSNT_01819___ 1 ATGCCAGCAATTGTCGGGCCTATAGCTATCAATTCCATATCGGGCGGAGT 50
||||||||||||..|||.||||||||||||||||||||||||||||||||
RBAM_010840__ 1 ATGCCAGCAATTACCGGACCTATAGCTATCAATTCCATATCGGGCGGAGT 50
BSNT_01819___ 51 CGTAAACTTTGGTGATTCCTTTTACCTTTCTCCGAAAAGCTCTTCAAAAT 100
|||||||||||||||||||||||||||||||||.|||||||||||.||||
RBAM_010840__ 51 CGTAAACTTTGGTGATTCCTTTTACCTTTCTCCAAAAAGCTCTTCTAAAT 100
BSNT_01819___ 101 CTGCGCTCGGTTCGGGAGCAGGAAACACGGGAGATTTCCTTCTATTAAAT 150
||||||||||||||||||||||.||.||.|||||||||||..|||||||.
RBAM_010840__ 101 CTGCGCTCGGTTCGGGAGCAGGCAATACCGGAGATTTCCTGTTATTAAAC 150
BSNT_01819___ 151 AATGCAGTCAACGCGACAAATTATATAGACCCCGATGTCAACGATCAGGA 200
||.|..|||||.||||||||.|||||||||||||||||||.||||||..|
RBAM_010840__ 151 AACGTTGTCAATGCGACAAACTATATAGACCCCGATGTCAGCGATCAAAA 200
BSNT_01819___ 201 TATGGTTGGAAACGGATAA 219
|.||||.|||||||..|||
RBAM_010840__ 201 TGTGGTAGGAAACGCCTAA 219
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