Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01813 and RBAM_010810
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:32
# Commandline: needle
# -asequence dna-align/BSNT_01813___sbcD.1.9828.seq
# -bsequence dna-align/RBAM_010810___sbcD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01813___sbcD-RBAM_010810___sbcD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01813___sbcD-RBAM_010810___sbcD.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01813___sbcD
# 2: RBAM_010810___sbcD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1184
# Identity: 921/1184 (77.8%)
# Similarity: 921/1184 (77.8%)
# Gaps: 19/1184 ( 1.6%)
# Score: 3553.0
#
#
#=======================================
BSNT_01813___ 1 TTGCGGATTTTACATACGGCTGACTGGCATCTTGGAAAAACGCTTGAAGG 50
.||||.|||||||||||.|||||||||||.||.||.||||||||.|||||
RBAM_010810__ 1 ATGCGCATTTTACATACAGCTGACTGGCACCTCGGCAAAACGCTGGAAGG 50
BSNT_01813___ 51 AAGAAGCAGGCTGAGTGAACAGGCCGATGTGCTGGATGAAATAAATACGA 100
.||||||.|||||||.||.||||||||.||.|||||.||..|.|||||.|
RBAM_010810__ 51 CAGAAGCCGGCTGAGCGAGCAGGCCGAAGTACTGGAAGAGCTGAATACCA 100
BSNT_01813___ 101 TTGTAAAGGATGAGCAGATCGATGC---CATTGTAATGGCGGGGGATGCA 147
||||.|||||.||..|.||.||||| |||| |||||||||||||.|
RBAM_010810__ 101 TTGTCAAGGAAGAAAACATTGATGCGGTCATT---ATGGCGGGGGATGTA 147
BSNT_01813___ 148 TTTGACACCGTAAACCCGCCAGCTTTAGCCGAGCAGCTGTTTTATGAAAG 197
|||||.||.||.||||||||.||..|.||.||.||..|||.|||.|||||
RBAM_010810__ 148 TTTGATACGGTCAACCCGCCTGCGCTCGCTGAACAATTGTATTACGAAAG 197
BSNT_01813___ 198 CCTGTCTGCGCTTAGCGACAGAGGAAAGCGCCCGATCGTCGTCATTGCCG 247
.||.||.||||||...|||.|.||||||||||||.|.|||||||||||||
RBAM_010810__ 198 TCTTTCCGCGCTTTCTGACGGTGGAAAGCGCCCGGTTGTCGTCATTGCCG 247
BSNT_01813___ 248 GAAACCACGATAATCCTGACCGTTTGTCCGCCGCTTCACCGCTGACACAT 297
|||||||.||.|||||.|||.|..||.|.||.|||||.|||.|.|||.||
RBAM_010810__ 248 GAAACCATGACAATCCCGACAGGCTGGCGGCGGCTTCTCCGTTAACAAAT 297
BSNT_01813___ 298 GAAAACGGCATTCATTTAATCGGTTATCCGACAACAGAGCCGATTCATAT 347
||...||||||||||||||||||.||||||...|||||.||..|.|||||
RBAM_010810__ 298 GAGCGCGGCATTCATTTAATCGGCTATCCGCGGACAGAACCCGTGCATAT 347
BSNT_01813___ 348 TGAAGTGCCTTCAGCAGGA-GAGCTTTTGGCGGTTGGAGCGCTGGCGTAC 396
|||||||||.||.|| ||| |||||.||.||.||.|..||||||||.||.
RBAM_010810__ 348 TGAAGTGCCGTCGGC-GGACGAGCTGTTAGCCGTAGCTGCGCTGGCATAT 396
BSNT_01813___ 397 CCATCTGAAGCGCGGTTAAATGAAGTGCTATCCGATACGTTTGATGAAAA 446
||.||.||.|||.|.|||||.||||||||.||.|||||||||||.|||||
RBAM_010810__ 397 CCGTCAGAGGCGAGATTAAACGAAGTGCTTTCTGATACGTTTGAGGAAAA 446
BSNT_01813___ 447 GCTGCTCCGTGATCACTATGATGTGAAAATCAGGCAGGCGTTTGAGCATA 496
|||.||.||.|||||.||.|||||.||||||||..|||||||||..||.|
RBAM_010810__ 447 GCTTCTTCGCGATCATTACGATGTCAAAATCAGAGAGGCGTTTGCTCACA 496
BSNT_01813___ 497 TGACAAGCCGGTTCCGGAACGATGCAGTGAAGATTGCCGCCAGCCATATT 546
||....|.|.||.||||.|||||||.|||||.||.||.||.|||||.|||
RBAM_010810__ 497 TGTGCGGACTGTGCCGGGACGATGCCGTGAAAATCGCGGCGAGCCACATT 546
BSNT_01813___ 547 TATGTGGCAGGCGGAAACCAAACCGATTCAGAGCGGCCGATTGAAGTCGG 596
|||||.||.||.||.||.||.||||||||||||||.||||||||||||||
RBAM_010810__ 547 TATGTCGCGGGGGGGAATCAGACCGATTCAGAGCGTCCGATTGAAGTCGG 596
BSNT_01813___ 597 CGGTGCATACACGGTGGCTGCTGAAAGCCTGCCGGCAGATGCCGCTTACG 646
.||.||.||||||||.||.|||||.|||||||||||.|||||.|||||||
RBAM_010810__ 597 GGGCGCTTACACGGTCGCCGCTGACAGCCTGCCGGCTGATGCGGCTTACG 646
BSNT_01813___ 647 TTGCGCTCGGCCATTTGCATCGCCCGCAAACGATCAAGCGGGCGCGGACG 696
|.||.|||||||||.|.||.||.|||||||||||||||||.||...||||
RBAM_010810__ 647 TGGCTCTCGGCCATCTCCACCGTCCGCAAACGATCAAGCGCGCCAAGACG 696
BSNT_01813___ 697 CTTGCGCGTTATTCAGGATCTCCGCTCGCCTACAGCTTTTCTGAAGCGGG 746
..|||.|||||||||||.|||||||||||.|||||||||||.|||||.||
RBAM_010810__ 697 GCTGCCCGTTATTCAGGCTCTCCGCTCGCATACAGCTTTTCAGAAGCCGG 746
BSNT_01813___ 747 CTACGCTAAATCAGTGACGATTGTGGACGCAAAGCCTGGGGAAGAGGCCA 796
.||.||.|||||.||||||.|.||.||.||.|||||.||.|.|||.||.|
RBAM_010810__ 747 TTATGCCAAATCGGTGACGGTGGTAGAAGCGAAGCCCGGCGGAGAAGCGA 796
BSNT_01813___ 797 CTTGGCAAGAGGTGTTATTATCAAGCGGCAAGCCACTTGTGAAGTGGAAA 846
..|||.|||||.|.||..|.||...|||.||.||.||.||.||.||||||
RBAM_010810__ 797 AGTGGGAAGAGATTTTCCTGTCTTCCGGTAAACCGCTCGTCAAATGGAAA 846
BSNT_01813___ 847 GCGGCAAATGGATTGAGTGAGGTGTACAGCTGGCTGGATGAAGACAGAGA 896
||| .|.||..||||.||.||..||.|||||||.|||||||...|.||
RBAM_010810__ 847 GCG---CAGGGGCTGAGCGAAGTTCACGGCTGGCTCGATGAAGGGCGTGA 893
BSNT_01813___ 897 TCAGAATGCTTGGATTGACCTGGAAATCCGTGTCGCGGACCAGCTGTCAC 946
.|.||||||.|||||.||.||.||.||||.|.|..||||.|||||.||.|
RBAM_010810__ 894 CCGGAATGCCTGGATCGATCTTGATATCCATTTGACGGATCAGCTTTCTC 943
BSNT_01813___ 947 TTGAAGAGATTCACAGGCTGCGGAAGGCGCACCCGGGCTTTATCCATATC 996
|.||.||.|||||..|||||.|.||||||||.||.|||||||||||||||
RBAM_010810__ 944 TCGAGGAAATTCATCGGCTGAGAAAGGCGCATCCCGGCTTTATCCATATC 993
BSNT_01813___ 997 AGGCCGGTTTTTGAAGAACGGAACAAAGACCG----GGAACGGATCGAGG 1042
||||||||||||||||| ||.|.|||||| .||.|||||.||.|
RBAM_010810__ 994 AGGCCGGTTTTTGAAGA----AAAAGAGACCGAAAATGACCGGATTGAAG 1039
BSNT_01813___ 1043 TTAAACATGTCTCAATCGAGGACCGCTTTAAGAAATTTTATGAAAAACAA 1092
|.|||||....|||||.|||||.||.||||||||.|||||||||||||||
RBAM_010810__ 1040 TGAAACACACATCAATTGAGGATCGATTTAAGAAGTTTTATGAAAAACAA 1089
BSNT_01813___ 1093 ACTGGCGGTGCGGTGCCGGATGAAGAAATGGTGAAGCTGTTTTTAGAGCT 1142
||.|||||.|..|||||||||||.||.|||||.|||||||||||||||||
RBAM_010810__ 1090 ACGGGCGGCGGCGTGCCGGATGAGGAGATGGTCAAGCTGTTTTTAGAGCT 1139
BSNT_01813___ 1143 TGCATCAGGCGTTGAAGAGGAGGATGCGAAATGA 1176
|||.||||..|.|||.|||||||||||||.||||
RBAM_010810__ 1140 TGCGTCAGCAGATGATGAGGAGGATGCGACATGA 1173
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