Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01778 and RBAM_010710
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:29
# Commandline: needle
# -asequence dna-align/BSNT_01778___sipV.1.9828.seq
# -bsequence dna-align/RBAM_010710___sipV.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01778___sipV-RBAM_010710___sipV.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01778___sipV-RBAM_010710___sipV.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01778___sipV
# 2: RBAM_010710___sipV
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 522
# Identity: 384/522 (73.6%)
# Similarity: 384/522 (73.6%)
# Gaps: 21/522 ( 4.0%)
# Score: 1356.0
#
#
#=======================================
BSNT_01778___ 1 ATGAAAAAACGGTTTTGGTTTCTTGCCGGTGTAGTGTCCGTTGTTCTCGC 50
.||||||||||.|||||||||.|.|||||.||..|...|||||||.|.||
RBAM_010710__ 1 TTGAAAAAACGATTTTGGTTTATAGCCGGCGTGCTTATCGTTGTTTTGGC 50
BSNT_01778___ 51 CATTCAGGTTAAA-AATGCTGTCTTTATTGATTACAAGGTAGAAGGCGTC 99
|||.|| .||||| |||||..|.|||||||||||.||.||.|||||..||
RBAM_010710__ 51 CATACA-ATTAAAGAATGCCATTTTTATTGATTATAAAGTCGAAGGAATC 99
BSNT_01778___ 100 AGTATGAACCCGACCTTCCAGGAAGGAAACGAATTGTTGGTCAATAAATT 149
||.|||||.||||||||..|..|||||||.||..||.|||||||.||.||
RBAM_010710__ 100 AGCATGAATCCGACCTTTAAACAAGGAAATGAGCTGATGGTCAACAAGTT 149
BSNT_01778___ 150 TTCGCATCGATTTAAAACCATCCATCGTTTTGACATCGTCCTTTTTAAAG 199
|||.|||||.|..|||||.||||..|||||.||.||.|||||.|||||||
RBAM_010710__ 150 TTCCCATCGTTACAAAACGATCCGCCGTTTCGATATTGTCCTGTTTAAAG 199
BSNT_01778___ 200 GCCCTGATCATAAAGTGCTGATTAAACGGGTAATCGGCTTGCCCGGTGAA 249
||||..|.|..|||||||||||.|||||.||.|||||..|.|||||.||.
RBAM_010710__ 200 GCCCGCACCGCAAAGTGCTGATCAAACGTGTCATCGGGCTCCCCGGCGAG 249
BSNT_01778___ 250 ACGATCAAATATAAAGATGATCAGCTGTATGTGAACGGAAAGCAGGTTGC 299
.|.|||..|||.|..||.|||||||||||||||||.|||||.|.|||.||
RBAM_010710__ 250 TCAATCGCATACAGGGAGGATCAGCTGTATGTGAATGGAAAACGGGTGGC 299
BSNT_01778___ 300 TGAGCCATTTTTGAAGCATTTGAA---ATCTGTTTCTGCCGGCAGCCATG 346
.||.||.|||||.||.|..||.|| |||..|.||.|||||.|||||||
RBAM_010710__ 300 GGAACCGTTTTTAAAACCGTTAAAGTCATCATTGTCCGCCGGGAGCCATG 349
BSNT_01778___ 347 TAACGGGTGATTTTTCTTTGAAAGATGTGACGGG----AACAAGCAAGGT 392
|.||.|||||||.|.|..||||.||...|||.|| || ||||| |
RBAM_010710__ 350 TGACCGGTGATTATACGCTGAAGGAAACGACCGGGCGCAA-AAGCA---T 395
BSNT_01778___ 393 GCCGAAAGGAAAATATTTTGTCGTTGGAGATAATCGCATATACAGCTTCG 442
.|||||.|||.||||.|||||..||||.||.||.||||||||||||.|||
RBAM_010710__ 396 ACCGAAGGGACAATACTTTGTTATTGGCGACAACCGCATATACAGCCTCG 445
BSNT_01778___ 443 ACAGCCGGCATTTTGGTCCGA-TAAGAGAAAAAAATATTGTCGGTGTGAT 491
|||||||.|||||.||||||| |||| ||.|||.|.||||||||.||.||
RBAM_010710__ 446 ACAGCCGTCATTTCGGTCCGATTAAG-GATAAAGACATTGTCGGAGTTAT 494
BSNT_01778___ 492 ------TTCTGATGCCGAATAA 507
.||.||.|||.|.|.|
RBAM_010710__ 495 CAGTGAATCAGACGCCAAGTGA 516
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