Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01768 and RBAM_010600

See Amino acid alignment / Visit BSNT_01768 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:28
# Commandline: needle
#    -asequence dna-align/BSNT_01768___comK.1.9828.seq
#    -bsequence dna-align/RBAM_010600___comK.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01768___comK-RBAM_010600___comK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01768___comK-RBAM_010600___comK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01768___comK
# 2: RBAM_010600___comK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 582
# Identity:     454/582 (78.0%)
# Similarity:   454/582 (78.0%)
# Gaps:           6/582 ( 1.0%)
# Score: 1741.0
# 
#
#=======================================

BSNT_01768___      1 ATGAGTCAGAAAACAGACGCACCTTTAGAATCGTATGAAGTGAACGGCGC     50
                     |||.|.|||||||||.|||||||.||||||...||.|||||.||..|..|
RBAM_010600__      1 ATGTGCCAGAAAACACACGCACCCTTAGAAAGCTACGAAGTAAATCGTTC     50

BSNT_01768___     51 AACAATTGCCGTGCTGCCAGAAGAAATAGACGGCAAAATCTGTTCCAAAA    100
                     |||.||.||.||..||||.||.|||||||||||.|||||..|.||.||..
RBAM_010600__     51 AACCATCGCTGTTTTGCCTGAGGAAATAGACGGTAAAATGGGGTCGAAGG    100

BSNT_01768___    101 TTATTGAAAAAGATTGCGTGTTTTATGTCAACATGAAGCCGCTGCAAATT    150
                     |.|||||.|||||.|||.|..|.|||||||.||||||||||.|.||.||.
RBAM_010600__    101 TCATTGAGAAAGACTGCATTCTGTATGTCAGCATGAAGCCGATTCACATC    150

BSNT_01768___    151 GTCGACAGAAGCTGCCGATTTTTTGGATCAAGCTATGCGGGAAGAAAAGC    200
                     .||||||||||||||||.|..|||||.||.||||||||.||.||||||||
RBAM_010600__    151 ATCGACAGAAGCTGCCGCTACTTTGGCTCCAGCTATGCCGGGAGAAAAGC    200

BSNT_01768___    201 AGGAACTTATGAAGTGACAAAAATTTCACACAAGCCGCCAATCATGGTGG    250
                     .|||||.|||||||.||..||||||||.|||||||||||.||.|||||||
RBAM_010600__    201 GGGAACATATGAAGCGATTAAAATTTCTCACAAGCCGCCGATTATGGTGG    250

BSNT_01768___    251 ACCCTTCGAATCAAATCTTTTTATTCCCTACACTTTCTTCGACAAGACCC    300
                     |||||||.|||||.||||||||||||||||||||||||||..||||.||.
RBAM_010600__    251 ACCCTTCAAATCACATCTTTTTATTCCCTACACTTTCTTCTGCAAGGCCT    300

BSNT_01768___    301 CAATGCGGCTGGATTTCCCATGTGCATGTAAAAGAATTCAAAGCGACTGA    350
                     ||||||||||||||.||.||||||||.||.|||||.||..||.||||.|.
RBAM_010600__    301 CAATGCGGCTGGATATCTCATGTGCACGTTAAAGATTTTCAACCGACGGC    350

BSNT_01768___    351 ATTCGACGATACGGAAGTGACGTTTTCAAATGGGAAAACGATGGAGCTGC    400
                     |||.||.||.||.|..||.|||||.|||||.||.|||||||||||.||| 
RBAM_010600__    351 ATTTGATGACACAGCGGTCACGTTCTCAAACGGCAAAACGATGGAACTG-    399

BSNT_01768___    401 CGA--TCTCTTATAATTCGTTCGAGAACCAGGTATATCGAACAGCGTGGC    448
                      ||  |.||.|||.||||.||.||.||.|||||.||..||||.||.|..|
RBAM_010600__    400 -GAAGTATCCTATCATTCTTTTGAAAATCAGGTTTACAGAACCGCCTATC    448

BSNT_01768___    449 TTAGAACCAAGTTCCAAGACAGAATCGACCACCGCGTGCCGAAAAGGCAG    498
                     |.|||||||..||.||.|||||.||.|.|...|..||.|||||..|||||
RBAM_010600__    449 TCAGAACCACTTTTCAGGACAGGATGGGCAGTCATGTCCCGAAGCGGCAG    498

BSNT_01768___    499 GAATTTATGCTGTACCCGAAGGAAGAGCGGACGAAG-ATGATTTATGATT    547
                     |||||.||||||||.|||||.||||||||||| ||| |||||.||.||.|
RBAM_010600__    499 GAATTCATGCTGTATCCGAAAGAAGAGCGGAC-AAGAATGATCTACGACT    547

BSNT_01768___    548 TTATTTTGCGTGAGCTCGGGGAGCGGTATTAG    579
                     ||||||||||.|||||.||||||.|.||||||
RBAM_010600__    548 TTATTTTGCGGGAGCTGGGGGAGAGATATTAG    579


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