Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01767 and RBAM_010590

See Amino acid alignment / Visit BSNT_01767 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:28
# Commandline: needle
#    -asequence dna-align/BSNT_01767___yhzC.1.9828.seq
#    -bsequence dna-align/RBAM_010590___yhzC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01767___yhzC-RBAM_010590___yhzC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01767___yhzC-RBAM_010590___yhzC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01767___yhzC
# 2: RBAM_010590___yhzC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 235
# Identity:     203/235 (86.4%)
# Similarity:   203/235 (86.4%)
# Gaps:           2/235 ( 0.9%)
# Score: 875.0
# 
#
#=======================================

BSNT_01767___      1 ATGAAAGAGAAAAAATCGTACACTGAGCTCATGAAGTCCCGCAACACGCA     50
                     ||||||||||||||.|||||||||||||||||||||||||||||||||||
RBAM_010590__      1 ATGAAAGAGAAAAAGTCGTACACTGAGCTCATGAAGTCCCGCAACACGCA     50

BSNT_01767___     51 AAAAACAAAAGAATTCGATGTCACAATGACGGATATCTACATTCAAATGG    100
                     ||.|.||||.|||||||||||.||||||.|.|||||.|||||||||||||
RBAM_010590__     51 AATAGCAAACGAATTCGATGTGACAATGGCCGATATTTACATTCAAATGG    100

BSNT_01767___    101 TGCTCGATGAATCCTTGTATAACCGTCGGCTTGCCATGCTGACGGACCAA    150
                     ||||.|||||||||||||||||.||.|||||.|||||||||||....||.
RBAM_010590__    101 TGCTTGATGAATCCTTGTATAAACGCCGGCTCGCCATGCTGACCATGCAG    150

BSNT_01767___    151 ATTAACAAAGC-CTTGGACGAAAAAGATAAAGATGCGTTTCTTACGCTCT    199
                     |||||.||.|| ||| ||.||.|||.|||||||.|||||.||.|||||.|
RBAM_010590__    151 ATTAATAAGGCGCTT-GATGATAAAAATAAAGAAGCGTTCCTCACGCTTT    199

BSNT_01767___    200 CTAAAGAATATGCAGCGCTCAAGCAGAGCGAATAA    234
                     |.||||||||||||||.|||||.|||||.||||||
RBAM_010590__    200 CAAAAGAATATGCAGCACTCAAACAGAGTGAATAA    234


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