Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01745 and RBAM_010490
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:27
# Commandline: needle
# -asequence dna-align/BSNT_01745___yhfN.1.9828.seq
# -bsequence dna-align/RBAM_010490___yhfN.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01745___yhfN-RBAM_010490___yhfN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01745___yhfN-RBAM_010490___yhfN.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01745___yhfN
# 2: RBAM_010490___yhfN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1313
# Identity: 954/1313 (72.7%)
# Similarity: 954/1313 (72.7%)
# Gaps: 94/1313 ( 7.2%)
# Score: 3416.0
#
#
#=======================================
BSNT_01745___ 1 ATGCGCAAGTGGATTGCGGCAGCAGGACTTGCTTACGTGCTGTACGGGCT 50
||||||||.|||||.||||||||.||||||||.||.|||||||||||.||
RBAM_010490__ 1 ATGCGCAAATGGATAGCGGCAGCCGGACTTGCCTATGTGCTGTACGGCCT 50
BSNT_01745___ 51 GTTTTTTTATTGGTATTTTTTCCTGTCGGGTGATTCCGCAATACCGGAAG 100
.|||||.|||||||||||.||..||.|.||.||.|||||..|.|||||.|
RBAM_010490__ 51 TTTTTTCTATTGGTATTTCTTTATGACAGGCGACTCCGCCGTCCCGGAGG 100
BSNT_01745___ 101 CCGTGAAAGGG-ACGCAGGCTGATCCGGCTTCTTTCATGAA-----GCCG 144
|||| |||||| |||.|.||.||||||.|.||.||.|||.| ||||
RBAM_010490__ 101 CCGT-AAAGGGAACGAAAGCCGATCCGTCCTCGTTTATGGACCCGGGCCG 149
BSNT_01745___ 145 TCTGAGTTGGCAGTGGCCGAGCAGTATTCGAATGTCAAGAATTTTTTATT 194
.| |||.||..||.||..|.|.|||.|||||.|||.||||||||||
RBAM_010490__ 150 CC-----TGGAAGCCGCTGAAAACTTTTCAAATGTAAAGGATTTTTTATT 194
BSNT_01745___ 195 TTTTATCGGGGTACCACTTGATTGGTTTCTGTTTTTTGTTCTGCTTGTCA 244
|||.|||||.|..||..|.|||||||||.|.||||||.|.|||||..|.|
RBAM_010490__ 195 TTTCATCGGTGCGCCGTTAGATTGGTTTTTATTTTTTCTGCTGCTCATTA 244
BSNT_01745___ 245 GCGGTGTTT--CAAAGAAAATCAAGAAATGGATCGAAGCGGCCGTGCCTT 292
|||.|.|| |||| |||||.|||.|.|||.|.|||||.||.||||..|
RBAM_010490__ 245 -CGGGGCTTGCCAAA-AAAATAAAGCATTGGCTGGAAGCAGCGGTGCGCT 292
BSNT_01745___ 293 TTCGGTTTTTGCAGACCGTTGGTTTTGTGTTTGTGCTTTCGCTGA---TT 339
|||||.|..||||.|.||...|.||.||.||||||.||||.||.| ||
RBAM_010490__ 293 TTCGGGTGCTGCAAATCGGAAGCTTCGTATTTGTGATTTCACTCATCGTT 342
BSNT_01745___ 340 ACAACATTGGTGACGCTGCCTTTAGATTGGATAGGCTATCAAGTATCGCT 389
||..| ||...||||.||..|.||.|||||.||.||||..||.|||||
RBAM_010490__ 343 ACGGC---GGCTTCGCTTCCGCTTGAGTGGATCGGATATCGGGTTTCGCT 389
BSNT_01745___ 390 TGACTATAACATTTCCACACAGACAACGGCCAGCTGGGCTAAG-GATCAG 438
||..|||.|.|||||.||.||||||||.||.|||| ||.|||| ||.||.
RBAM_010490__ 390 TGCGTATCATATTTCGACGCAGACAACAGCAAGCT-GGATAAGAGACCAT 438
BSNT_01745___ 439 GTTATCAGCTTT-TGGATCAGCTTTCCAATCTTTACGCTTTGCGTTCTCG 487
||.|| .|.||| ||||||||.|||||..|.|||.|..|.||.||.||.|
RBAM_010490__ 439 GTCAT-TGATTTCTGGATCAGTTTTCCGCTGTTTGCCGTGTGTGTGCTTG 487
BSNT_01745___ 488 TTTTTTATTGGCTGATCAAAAGGCATGAAAAAAAATGGTGGTTATACGCC 537
|.|||||.||||||||||.||.||||..|||||||||||||||.|||||.
RBAM_010490__ 488 TGTTTTACTGGCTGATCACAAAGCATACAAAAAAATGGTGGTTTTACGCT 537
BSNT_01745___ 538 TGGCTGT-TAACAGTGCCGTTTTCGCTGTTTCTGTTTTTTATTCAGCCGG 586
||| ||| |.||.|||||||||.|.||||||.|||||||..|.|||||||
RBAM_010490__ 538 TGG-TGTCTTACTGTGCCGTTTACCCTGTTTTTGTTTTTCCTGCAGCCGG 586
BSNT_01745___ 587 TCATTATCGATCCTTTATACAATGATTTTTATCCGCTGAAAAACAAAGAG 636
||.|.||.|||||||||||||||||||||||||||||||||.||||.|||
RBAM_010490__ 587 TCGTGATTGATCCTTTATACAATGATTTTTATCCGCTGAAAGACAAGGAG 636
BSNT_01745___ 637 CTTGAAAGCAAAATTTTAGAGCTGGCAGATGAAGCCAATATTCCGGCTGA 686
||.|||||||||||.||...|||.||.||..|||||.|.||||||||...
RBAM_010490__ 637 CTGGAAAGCAAAATCTTGTCGCTTGCCGACAAAGCCGACATTCCGGCCAG 686
BSNT_01745___ 687 CCATGTATATGAAGTGAACATGTCAGAAAAAACAAATGCGCTGAATGCCT 736
||||||.||||||||.||.|||||.||.|||||.||||||||||||||.|
RBAM_010490__ 687 CCATGTTTATGAAGTAAATATGTCGGAGAAAACGAATGCGCTGAATGCGT 736
BSNT_01745___ 737 ATGTTACAGGAATTGGGGCCAATAAACGGATTGTATTGTGGGATACGACG 786
||||.||.|||||.||..|.|||||.|||||.||.|||||||||||||||
RBAM_010490__ 737 ATGTGACGGGAATCGGTTCGAATAAGCGGATCGTTTTGTGGGATACGACG 786
BSNT_01745___ 787 CTGAACAAACTTGACGATTCAGAAATCCTGTTTATTATGGGCCACGAAAT 836
||.||||||||..|.|||...|||||..||||.||||||||.||.||.||
RBAM_010490__ 787 CTTAACAAACTGAAGGATCGGGAAATTTTGTTCATTATGGGGCATGAGAT 836
BSNT_01745___ 837 GGGCCATTATGTCATGAAGCACGTTTACATCGGTCTGGCTGGTTATTTGC 886
|||.||.|||||.|||||||||||.||||||||.|||||.||.|||.|.|
RBAM_010490__ 837 GGGGCACTATGTGATGAAGCACGTGTACATCGGACTGGCCGGGTATCTCC 886
BSNT_01745___ 887 TCGTGTCGCTCGCCGGATTTTATGTCATTGATAAGCTTTACAAGCGGACG 936
|..||||..|.|||||.||.|||.|||||||.||||||||.|||||| |.
RBAM_010490__ 887 TGCTGTCATTAGCCGGGTTCTATATCATTGACAAGCTTTATAAGCGG-CT 935
BSNT_01745___ 937 GTTCGCCTAA----CCCGCAGCATGTTTCATTTAGAAGGACGGC---ATG 979
|| ||.|| .|.||.|.|||.|||||.|| |||| ||| |.|
RBAM_010490__ 936 GT---CCAAATTCTTCGGCCGAATGCTTCATATA-AAGG--GGCCTGAAG 979
BSNT_01745___ 980 ATCTTGCGGCACTTCCGCTGTTATTGCT-------TTTGTTTTCTGTTTT 1022
||||.||.||.||.|||||||||||||| |..|||.||.|||||
RBAM_010490__ 980 ATCTGGCCGCCCTCCCGCTGTTATTGCTGCTCATATCCGTTCTCAGTTTT 1029
BSNT_01745___ 1023 GAGCTT----TGCGGTGACGCCTTTTTCTAATGCTGTCTCGCGTTATCAG 1068
|||| |.||.|.||| |||||.|||||.||.||||||
RBAM_010490__ 1030 --GCTTCTGATCCGATTACG---------AATGCCGTCTCCCGGTATCAG 1068
BSNT_01745___ 1069 GAGAATAAGGCTGACCAGTATGGGATCGAGTTGACAGAGAACAGAGAAGC 1118
||.||....||.||||..||.||.||||||.||||.|..|||.|.|||||
RBAM_010490__ 1069 GAAAACGCCGCCGACCGTTACGGCATCGAGCTGACCGGAAACCGGGAAGC 1118
BSNT_01745___ 1119 CGCTGTTAAAACGTTTCAGGATTTGGCCGTGACGGGGCTGAGCCAGGTTG 1168
.||..||.|.|||||||||||||||||||..|||||.|||||||.|||..
RBAM_010490__ 1119 GGCGATTGAGACGTTTCAGGATTTGGCCGATACGGGACTGAGCCGGGTCA 1168
BSNT_01745___ 1169 ATCCTCCGGTGCTTGTGAAGATTTTCAGAGGCAGCCATCCTTCGATCATG 1218
|.||.|||.|.||.||.||.|||||||||||.|||||.||.|||||||||
RBAM_010490__ 1169 ACCCGCCGTTTCTCGTCAAAATTTTCAGAGGGAGCCACCCGTCGATCATG 1218
BSNT_01745___ 1219 GAACGGATTCAACATGCGGAGAAAGAAGAGAATGCGCCGGAACATCAGGA 1268
||.||||||.|||||||.|||.|||||
RBAM_010490__ 1219 GAGCGGATTGAACATGCTGAGGAAGAA----------------------- 1245
BSNT_01745___ 1269 TGCTGACAAATAA 1281
||||||
RBAM_010490__ 1246 -------AAATAA 1251
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