Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01742 and RBAM_010460
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:27
# Commandline: needle
# -asequence dna-align/BSNT_01742___yhfK.1.9828.seq
# -bsequence dna-align/RBAM_010460___yhfK.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01742___yhfK-RBAM_010460___yhfK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01742___yhfK-RBAM_010460___yhfK.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01742___yhfK
# 2: RBAM_010460___yhfK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 676
# Identity: 468/676 (69.2%)
# Similarity: 468/676 (69.2%)
# Gaps: 59/676 ( 8.7%)
# Score: 1603.5
#
#
#=======================================
BSNT_01742___ 1 ---ATGAAAGTGTTTTTAATCGGAGCGAACGGACAAATCGGGCA----AA 43
||||||||.|||.|.||||||||.||||||||.|||||.|| ..
RBAM_010460__ 1 ATGATGAAAGTATTTCTCATCGGAGCAAACGGACAGATCGGACAGCGGCT 50
BSNT_01742___ 44 GACTCGTCTCTTTATTCCAAGATAATCCTGA------TCATTCCATCAGA 87
|||..|.||.||| |||.| .|| .|||.|..|..|.
RBAM_010460__ 51 GACCGGGCTGTTT----CAAAA------AGACGGCACGCATACGCTGCGG 90
BSNT_01742___ 88 GCGATGGTCAGAAAAGAAGAACAGAAAGCGTCTCTTGAAGCTGCCGGTGC 137
|||||||||.|.|||.||||.|||||||...|.|||.||||.||.||..|
RBAM_010460__ 91 GCGATGGTCCGGAAACAAGAGCAGAAAGAAGCGCTTCAAGCCGCGGGAAC 140
BSNT_01742___ 138 AGAAGCTGTGCTTGCGAATCTGGAGGGCAGCCCGGAAGAAATC------G 181
||||||.||.|||||..||.||||.||.|||||||||||.||| |
RBAM_010460__ 141 AGAAGCCGTTCTTGCAGATTTGGAAGGAAGCCCGGAAGACATCGCGAAAG 190
BSNT_01742___ 182 CCGCTGCGGCAAAAGGCTGTGACGCGATCATTTTCACAGCCGGTTCCGGC 231
|||||| ||||||||||||||||..|.||.||.|||||.||.||.
RBAM_010460__ 191 CCGCTG------AAGGCTGTGACGCGATTGTGTTTACCGCCGGATCAGGA 234
BSNT_01742___ 232 GGCAGCACAGGCTATGATAAAACGCTGCTGGTGGATCTTGATGGAGCGGC 281
||.|||||.||.||.|||||.|||||..||.|.||||||||.|||||.||
RBAM_010460__ 235 GGAAGCACCGGATACGATAAGACGCTTTTGATTGATCTTGACGGAGCCGC 284
BSNT_01742___ 282 AAAAGCCATTGAAGCTGCGGACATTGCCGGAATCAAACGGTTTATTATGA 331
.|||||.||.|||||.||..|.||.|||||.|||||.|||||.||||||.
RBAM_010460__ 285 GAAAGCGATAGAAGCGGCAAAGATAGCCGGCATCAAGCGGTTCATTATGG 334
BSNT_01742___ 332 TCAGCGCCCTGCAAGCCCATAACCGTGAAAATTGGAATGAGGCACTCAAA 381
|.||||||||.||.||.||||||||.|..|||||||||||.||.||.||.
RBAM_010460__ 335 TAAGCGCCCTTCAGGCTCATAACCGCGGCAATTGGAATGAAGCGCTGAAG 384
BSNT_01742___ 382 CCTTATTATGTGGCCAAGCATTATGCTGATAAAATTCTGGAAGCGAGCGG 431
||.|||||.|..||.|||||||||||.|||||||||||.|||||||||||
RBAM_010460__ 385 CCGTATTACGCCGCAAAGCATTATGCGGATAAAATTCTTGAAGCGAGCGG 434
BSNT_01742___ 432 TTTAACCTATACGATTATCCGTCCGGGAGGCCTTCGCAATGAGCCTGGAA 481
|.|.||.||||||||||||||.|||||.||..|....|||||.||.||.|
RBAM_010460__ 435 TCTGACGTATACGATTATCCGGCCGGGCGGGTTATTAAATGATCCCGGCA 484
BSNT_01742___ 482 CGGGAACTGTTTCAGCAGCGAAGGATCTGGAGCGGGGATTTATTTCCCGT 531
||||||.|.|...|||.|||...|||.|.||..|.||.||.|||||..|.
RBAM_010460__ 485 CGGGAAATATCAAAGCCGCGGCCGATTTAGAAAGAGGCTTCATTTCAAGA 534
BSNT_01742___ 532 GAGGACGTTGCAAAAACGGTCATTGCCTCTTTAGATGAGAAGAATACG-- 579
||.||.||.||.||.||.||.||.||.||..|.|||||...|||||||
RBAM_010460__ 535 GACGATGTCGCCAAGACCGTTATCGCATCCCTTGATGAACCGAATACGTA 584
BSNT_01742___ 580 -GAAAATCGGGCCTTTGATCTGACAGAAGG-AGATACGCCGATTGCCGAA 627
||||| .||.||.||||||||||..|| || .||||||.|
RBAM_010460__ 585 TGAAAA---AGCATTCGATCTGACAGCGGGCAG-CACGCCGGT------- 623
BSNT_01742___ 628 GCATTGAA-----GAAACTATGA--- 645
||.|||| |||||.||.|
RBAM_010460__ 624 -CAGTGAAGCGCTGAAACAATTATAG 648
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