Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01738 and RBAM_010420

See Amino acid alignment / Visit BSNT_01738 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:26
# Commandline: needle
#    -asequence dna-align/BSNT_01738___gltT.1.9828.seq
#    -bsequence dna-align/RBAM_010420___gltT.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01738___gltT-RBAM_010420___gltT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01738___gltT-RBAM_010420___gltT.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01738___gltT
# 2: RBAM_010420___gltT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1294
# Identity:    1037/1294 (80.1%)
# Similarity:  1037/1294 (80.1%)
# Gaps:           8/1294 ( 0.6%)
# Score: 4128.0
# 
#
#=======================================

BSNT_01738___      1 ATGAAAAGAATTAAG-TTTGGATTAGCCACACAAATATTCGTTGGACTTA     49
                     ||||||| |||||.| ||||||.||||.||.|||||.|||||.|||||.|
RBAM_010420__      1 ATGAAAA-AATTACGCTTTGGACTAGCGACGCAAATTTTCGTCGGACTCA     49

BSNT_01738___     50 TTCTAGGTGTCATTGTTGGCGTCATTTGGTATGGCAA-CCCAGCATTGCC     98
                     |.|||||.||..|.||.||.|||||.|||||.||||| |||..|||| ||
RBAM_010420__     50 TACTAGGGGTTGTAGTCGGTGTCATCTGGTACGGCAATCCCGCCATT-CC     98

BSNT_01738___     99 TACTTACCTGCAGCCAATCGGGGATCTCTTTTTACGCTTAATCAAAATGA    148
                     .||.||..|.|||||.|||||.|||.|.||||||||||||||||||||||
RBAM_010420__     99 AACATATTTACAGCCTATCGGCGATTTGTTTTTACGCTTAATCAAAATGA    148

BSNT_01738___    149 TAGTGATTCCTATTGTTGTCTCCAGCTTAATCATCGGTGTAGCCGGTGCA    198
                     ||||||||||.|||||.||||||||||||||||||||.||.|||||.||.
RBAM_010420__    149 TAGTGATTCCAATTGTCGTCTCCAGCTTAATCATCGGCGTTGCCGGCGCG    198

BSNT_01738___    199 GGAAATGGAAAGCAAGTCGGTAAATTAGGCTTCAGAACGATTCTGTACTT    248
                     ||||..|||||.||||||||.|||||||||||||||||||||.||||.||
RBAM_010420__    199 GGAAGCGGAAAACAAGTCGGAAAATTAGGCTTCAGAACGATTTTGTATTT    248

BSNT_01738___    249 CGAGATCATCACGACTTTTGCCATTATTCTCGGACTAGCCCTTGCAAACA    298
                     .||||||||.||.||||||||||||||||||||.||.||..|.||.||..
RBAM_010420__    249 TGAGATCATTACCACTTTTGCCATTATTCTCGGGCTGGCTTTGGCGAATC    298

BSNT_01738___    299 TCTTCCATCCGGGTACAGGAGTTAATATACACGAAGCTCAAAAATCGGAC    348
                     |.||.||.|||||..||||.|||||||||||.|||||||||||..|.||.
RBAM_010420__    299 TGTTTCAGCCGGGAGCAGGCGTTAATATACATGAAGCTCAAAAGACAGAT    348

BSNT_01738___    349 ATCAGTCAATATGTTGAAACTGAAAAAGAACAAAGTAATAAATCAGTGGC    398
                     ||||||||||||||||||||.||||||||||||||...||||||.||.||
RBAM_010420__    349 ATCAGTCAATATGTTGAAACAGAAAAAGAACAAAGCGGTAAATCCGTTGC    398

BSNT_01738___    399 AGAAACGTTCCTCCATATTGTGCCGACAAACTTCTTCCAGTCATTGGTCG    448
                     .||.||.|||||.|||||.||.|||||||||||||||||.|||||.|.||
RBAM_010420__    399 GGACACATTCCTGCATATCGTACCGACAAACTTCTTCCAATCATTAGCCG    448

BSNT_01738___    449 AAGGGGATCTTCTAGCCATCATTTGCTTTACAGTACTATTTGCATTGGGT    498
                     ||||.|||||.||.||||||||.||||||||.||.||.||||||.|.||.
RBAM_010420__    449 AAGGAGATCTGCTTGCCATCATCTGCTTTACCGTGCTGTTTGCACTCGGC    498

BSNT_01738___    499 ATTTCCGCAATCGGTGAAAGAGGCAAGCCTGTATTAGCCTTTTTTGAAGG    548
                     ||.||.|||||||||||||.|||.|||||.|||||.|||||.||||||||
RBAM_010420__    499 ATCTCGGCAATCGGTGAAAAAGGAAAGCCCGTATTGGCCTTCTTTGAAGG    548

BSNT_01738___    549 TGTATCCCATGCCATGTTCCACGTTGTAAACCTTGTGATGAAAGTGGCGC    598
                     |||.||.|||||.||||||||.|||||.|||||.||.||||||||.||||
RBAM_010420__    549 TGTTTCTCATGCGATGTTCCATGTTGTGAACCTCGTCATGAAAGTTGCGC    598

BSNT_01738___    599 CATTCGGCGTTTTCGCTCTTATCGGAGTGACTGTGTCTAAATTCGGACTC    648
                     |.||.||.|||||.||..|.|||||.||.||.||.||.|||||.||.|||
RBAM_010420__    599 CGTTTGGTGTTTTTGCGTTGATCGGTGTTACCGTTTCCAAATTTGGGCTC    648

BSNT_01738___    649 GGTTCTCTTATCTCTCTCGGAAAGCTCGTTGGATTGGTTTATGTCGCGCT    698
                     .||||.||..|.||.|||||.||.||.||.||.||.||.|||||.||..|
RBAM_010420__    649 AGTTCCCTGCTTTCACTCGGTAAACTGGTCGGTTTAGTATATGTAGCTTT    698

BSNT_01738___    699 TGCTTTCTTCTTAATTGTTATTTTCGGGATTGTCGCAAAAATTGCCGGCA    748
                     .||||||||..|.||||||.|.|||||.||.||||.|||..|||||||..
RBAM_010420__    699 GGCTTTCTTTCTCATTGTTGTATTCGGAATCGTCGGAAAGCTTGCCGGTT    748

BSNT_01738___    749 TCAGCATCTTCAAGTTCCTTGCTTACATGAAGGACGAAATCTTACTGGCG    798
                     |.|.|||.|||||.|||||.||.||.||||||||.|||||.|||.|||||
RBAM_010420__    749 TAAACATTTTCAAATTCCTCGCCTATATGAAGGATGAAATTTTATTGGCG    798

BSNT_01738___    799 TTCAGTACGTCCAGCTCTGAAACGGTTCTTCCGCGCATCATGGAAAAAAT    848
                     |||||||||||.|||||.|||||.||.||.||.|||||||||||.||.||
RBAM_010420__    799 TTCAGTACGTCAAGCTCCGAAACCGTACTCCCCCGCATCATGGAGAAGAT    848

BSNT_01738___    849 GGAGAAAATCGGATGTCCGAAAGGAATTGTTTCATTTGTCATTCCGATCG    898
                     ||||||||||||.|||||||||||.||||||||.|||||..|.|||||||
RBAM_010420__    849 GGAGAAAATCGGCTGTCCGAAAGGTATTGTTTCCTTTGTTGTGCCGATCG    898

BSNT_01738___    899 GTTACACGTTTAACTTAGACGGTTCCGTTCTCTATCAATCTATTGCCGCA    948
                     |.||.||.||||||||||||||.||.||.||.||.|||||.||.|||||.
RBAM_010420__    899 GATATACCTTTAACTTAGACGGATCTGTGCTGTACCAATCAATCGCCGCT    948

BSNT_01738___    949 CTCTTTTTAGCACAGGTATATGGCATTGATTTGACGATTTGGCACCAGAT    998
                     .|.||..|.||.||||||||...||||||.|||||.||||||||.|||||
RBAM_010420__    949 TTATTCCTCGCTCAGGTATACCACATTGACTTGACCATTTGGCAGCAGAT    998

BSNT_01738___    999 TACGCTTGTGCTCGTCTTAATGGTGTCATCTAAAGGGATGGCTGCCGTGC   1048
                     |||.||||||||.|||||.|||||..|.||.|||||.|||||||||||||
RBAM_010420__    999 TACCCTTGTGCTTGTCTTGATGGTCACTTCCAAAGGAATGGCTGCCGTGC   1048

BSNT_01738___   1049 CTGGTACTTCTTTTGTTGTCTTGCTTGCAACGCTTGGCACCATCGGCGTT   1098
                     |.||.||||||||.||.|||.|||||||.||.||.|||||.|||||||||
RBAM_010420__   1049 CCGGGACTTCTTTCGTCGTCCTGCTTGCGACACTCGGCACAATCGGCGTT   1098

BSNT_01738___   1099 CCGGCTGAAGGACTTGCCTTTATTGCCGGCGTAGACCGCATCATGGATAT   1148
                     ||.||.|||||.|||||.||.||.|||||.||.|||||.||.|||||.||
RBAM_010420__   1099 CCTGCAGAAGGCCTTGCATTCATCGCCGGTGTTGACCGGATTATGGACAT   1148

BSNT_01738___   1149 GGCACGAACAGTTGTCAACCTGACTGGTAACGCGCTTGCTGCCGTTGTGA   1198
                     |||.||.||.||.|||||.|||||.||.||||||||.||..|||||||||
RBAM_010420__   1149 GGCCCGTACGGTCGTCAATCTGACCGGAAACGCGCTGGCATCCGTTGTGA   1198

BSNT_01738___   1199 TGTCTAAATGGGAAGGCATGTTTAATCCTGCGAAAGCAGAAACTGTTATG   1248
                     ||||.||||||||||||..||.|.||||.|..||||..|..|..||.|||
RBAM_010420__   1199 TGTCAAAATGGGAAGGCCAGTATGATCCCGTTAAAGGCGCGAAGGTCATG   1248

BSNT_01738___   1249 TCCCAATCG--AAAACAGAACAAAACGCAACCATTTCTGGTTAA   1290
                     ..||  |||  |||||||||||||||.|||||||.||.||||||
RBAM_010420__   1249 AGCC--TCGCCAAAACAGAACAAAACACAACCATCTCAGGTTAA   1290


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