Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01736 and RBAM_010410
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:26
# Commandline: needle
# -asequence dna-align/BSNT_01736___yhfE.1.9828.seq
# -bsequence dna-align/RBAM_010410___yhfE.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01736___yhfE-RBAM_010410___yhfE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01736___yhfE-RBAM_010410___yhfE.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01736___yhfE
# 2: RBAM_010410___yhfE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1099
# Identity: 790/1099 (71.9%)
# Similarity: 790/1099 (71.9%)
# Gaps: 116/1099 (10.6%)
# Score: 2915.5
#
#
#=======================================
BSNT_01736___ 1 ---------ATGACGTCTGTACGTAAAACGATGGAGCTCATTAAAGAACT 41
|||| .|| |.||||||||.||.|||||||||.|
RBAM_010410__ 1 GTGGCAAATATGA------AAC---ATACGATGGAACTGATTAAAGAATT 41
BSNT_01736___ 42 GGTATCGATCCCAAGCCCGACCGGAAATACATATGAGGTGATCAATTATA 91
|||.|||||.||.||.|||||.||.||||||||.|||||.|||...||||
RBAM_010410__ 42 GGTGTCGATTCCGAGTCCGACGGGCAATACATACGAGGTTATCGCCTATA 91
BSNT_01736___ 92 TTGAAAGCCTTTTAAAAGAATGGAAGGTAGAAACGGTTC--------GGA 133
..|||||.||||||||||||||| || ||..|| |.|
RBAM_010410__ 92 CAGAAAGTCTTTTAAAAGAATGG--GG------CGTCTCCTCTTACAGAA 133
BSNT_01736___ 134 ACCACAAGGGCGG-CTTAATTGCAACGCTTCCAGGACGCG---------- 172
|||.|||.||||| ||| .|||..||..||||.||.||.|
RBAM_010410__ 134 ACCGCAAAGGCGGTCTT-TTTGTCACAATTCCCGGCCGTGATGACAAGAA 182
BSNT_01736___ 173 ACACATCCCGGCATCGCATGCTGACTGCGCACGTTGACACCCTCGGCGCT 222
||||| |..|||||||.|||||.||.||.||.||||||||.
RBAM_010410__ 183 ACACA----------GATTGCTGACGGCGCATGTCGATACGCTCGGCGCG 222
BSNT_01736___ 223 ATGGTAAAGGAAATTAAAGCGGACGGCCGGCTGAAAATCGATTTAATCGG 272
|||||||||||.||.||.|||||||||||||||||.||.||.||.|||||
RBAM_010410__ 223 ATGGTAAAGGAGATAAAGGCGGACGGCCGGCTGAAGATTGACTTGATCGG 272
BSNT_01736___ 273 CGGGTTCCGCTACAACTCGATTGAGGGGGAGTATTGCCAAATTGAAACCG 322
|||.|||||.||..||||||||||.|||||.||||||.|.||..||||..
RBAM_010410__ 273 CGGCTTCCGATATCACTCGATTGAAGGGGAATATTGCGAGATCCAAACTT 322
BSNT_01736___ 323 CCTCAGGAAAAACGTACACAGGCACAATCTTAATGCATCAAACGTCTGTG 372
|.||.||.|||||.||.||||||||.||||||||||||||.||.||.|||
RBAM_010410__ 323 CTTCCGGCAAAACCTATACAGGCACCATCTTAATGCATCAGACTTCAGTG 372
BSNT_01736___ 373 CACGTATACAAAGACGCGGGAAAGGCTGAGCGGAATCAAGAGAATATGGA 422
|||||.|||||.|||||.||.|||||.|||||||||||.|||||||||||
RBAM_010410__ 373 CACGTCTACAAGGACGCCGGCAAGGCAGAGCGGAATCAGGAGAATATGGA 422
BSNT_01736___ 423 GATCCGCCTAGATGAACCTGTTCACTGCCGGA------AAGATACGGAGG 466
..|||||||.|||||.||||| ||||| ||||.|||...|
RBAM_010410__ 423 AGTCCGCCTTGATGAGCCTGT------CCGGACGAAGGAAGAGACGTCCG 466
BSNT_01736___ 467 AGCTTGGCATTGGCGTCGGAGATTTTGTGTCGTTTGATCCCCGTGTCGAG 516
|.||.|||||..|.|||||.|||||..|.||.|||||.||.||.||..||
RBAM_010410__ 467 ATCTCGGCATCAGGGTCGGCGATTTCATCTCATTTGACCCGCGCGTGCAG 516
BSNT_01736___ 517 ATCACATCAAGCGGATTTATTAAATCGCGCCATTTGGATGACAAAGCAAG 566
||.||..|.|||||.||||||||.||.||.|||.|.|||||||||||.||
RBAM_010410__ 517 ATTACGCCGAGCGGCTTTATTAAGTCCCGGCATCTTGATGACAAAGCGAG 566
BSNT_01736___ 567 CGTCGCCTTATTGCTCCGCTTAATTCATGAAATTCAA-----------AC 605
|| |.||||.|| ||.|| ||||.|| ||
RBAM_010410__ 567 CG--------TGGCTCTGC-----TCTTG-AATTTAATCCGCCGCATCAC 602
BSNT_01736___ 606 AGAAG---ACATTGAGCTGCCGTATACAACCCATTTTCTTATTTCCAATA 652
.|||| |.||.||.||.||||||||.||.||||||||.|||||.||||
RBAM_010410__ 603 GGAAGAGAAAATCGAACTTCCGTATACGACGCATTTTCTGATTTCTAATA 652
BSNT_01736___ 653 ATGAAGAAATCGGTTACGGCGGGAATTCGAATATTCCTCCTGAAACAGTT 702
|||||||||||||.||||||||.|||||.||.|||||||||||.||.||.
RBAM_010410__ 653 ATGAAGAAATCGGCTACGGCGGCAATTCCAACATTCCTCCTGAGACCGTC 702
BSNT_01736___ 703 GAATATTTGGCGGTTGATATGGGGGCTATCGGTGACGGGCAGGCGACAGA 752
|||||.|||||.||||||||||||||.|||||.|||||.|||.|.||.||
RBAM_010410__ 703 GAATACTTGGCTGTTGATATGGGGGCGATCGGCGACGGCCAGTCTACGGA 752
BSNT_01736___ 753 TGAATATTCTGTATCAATCTGTGTGAAGGATGCGAGCGGGCCGTATCATT 802
|||||||.|.||.||.||.||.|||||||||||||||||.|||||.||||
RBAM_010410__ 753 TGAATATACCGTCTCCATTTGCGTGAAGGATGCGAGCGGCCCGTACCATT 802
BSNT_01736___ 803 ATCAGCTCAGAAAGCATTTAG------TTCAATTAGCCGAGAAGC-ATCA 845
|||||||||||||.|||.|.| || ||.||| .|| ||..
RBAM_010410__ 803 ATCAGCTCAGAAAACATCTGGCCGGGCTT------GCGGAG-CGCTATGG 845
BSNT_01736___ 846 TATTGACTATAAGCTTGATATATATCCGTACTACGGGTCTGATGCGTCAG 895
.|||||.|||.||||||||||.||||||||.|||||.||||||||.||||
RBAM_010410__ 846 CATTGATTATCAGCTTGATATTTATCCGTATTACGGTTCTGATGCCTCAG 895
BSNT_01736___ 896 CAGCGATCAAATCCGGGCATGATATTGTACATGGCCTCATAGGGCCGGGA 945
||||.|||...||.||.|||||.||.||.||.||.||.||.||.||||||
RBAM_010410__ 896 CAGCCATCCGTTCGGGCCATGACATCGTCCACGGGCTGATCGGCCCGGGA 945
BSNT_01736___ 946 ATTGACGCTTCCCATGCATTTGAACGCACCCATAAATCATCTCTTCGCCA 995
|||||||||||.||.||.|||||||||||.|||.|||.|||.||||...|
RBAM_010410__ 946 ATTGACGCTTCACACGCTTTTGAACGCACGCATGAATTATCGCTTCTTAA 995
BSNT_01736___ 996 TACCGCTAAGCTTCTGTA---TTACTATGTACAGTCACCAATGGTATAA 1041
|||.||.||||||.||.| .|||..|.|| ||.||.||||.||||
RBAM_010410__ 996 TACGGCGAAGCTTTTGCACCGGTACGTTTTA---TCGCCGATGGCATAA 1041
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