Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01723 and RBAM_010330
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:25
# Commandline: needle
# -asequence dna-align/BSNT_01723___yhgC.1.9828.seq
# -bsequence dna-align/RBAM_010330___yhgC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01723___yhgC-RBAM_010330___yhgC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01723___yhgC-RBAM_010330___yhgC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01723___yhgC
# 2: RBAM_010330___yhgC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 506
# Identity: 386/506 (76.3%)
# Similarity: 386/506 (76.3%)
# Gaps: 10/506 ( 2.0%)
# Score: 1478.0
#
#
#=======================================
BSNT_01723___ 1 ATGAAGGTTTATATTACATATGGGACAGCCGATTTTTTAAAAACGATCGT 50
||||||||||||||||||||.||||||||||||||||||||.|||||.|.
RBAM_010330__ 1 ATGAAGGTTTATATTACATACGGGACAGCCGATTTTTTAAAGACGATTGC 50
BSNT_01723___ 51 ACAGAAGCATCCCTCAGAAAATATCCTTTTGATGCAGGGGCAGGAAAACG 100
|.||||.||.||....||.|||||..|..|||||||.|||..|||.||.|
RBAM_010330__ 51 AAAGAAACACCCGAGTGAGAATATGGTGCTGATGCAAGGGGGGGATAATG 100
BSNT_01723___ 101 CCATTTTAATTCATGAAACAAACGGAGATACCGTTTTCCAGGCACCACAC 150
|..|||||||||||||||||||.|||||.||||||||.|||||.||.||.
RBAM_010330__ 101 CGGTTTTAATTCATGAAACAAATGGAGAAACCGTTTTTCAGGCGCCCCAT 150
BSNT_01723___ 151 GCTTATGAAGTCATTGACCAAGTCGGAGAGATCAAACATCCCGGTTTTGC 200
.|.||||||..|||.|||...|||||.||.||||||.||||.||.|..||
RBAM_010330__ 151 TCCTATGAAAGCATCGACAGCGTCGGGGAAATCAAAAATCCGGGCTACGC 200
BSNT_01723___ 201 AGTATTGAACAATATTGCCGTTACTCAGGAAGGGCGTCCGCTGTTTGAAA 250
.||..|.|||||.||.||||||||.||||||||.||||||||||||||||
RBAM_010330__ 201 CGTCCTCAACAACATCGCCGTTACCCAGGAAGGCCGTCCGCTGTTTGAAA 250
BSNT_01723___ 251 ACAGATTTAAAAACAGAGCGGGAAAAGTCGAAAACGAGCCTGGCTTTGAA 300
||.|.|||||||||.|.||.||.|||||.|||||.||.||.||.|||.||
RBAM_010330__ 251 ACCGGTTTAAAAACCGCGCCGGCAAAGTGGAAAATGAACCCGGTTTTCAA 300
BSNT_01723___ 301 GCAATTCGAGTGCTCCGTCCGCTTGACAGTGACACCTATGTCATTCTGAC 350
||.||.||.||..|..|.|||||.||..|.||.||.|||||||||.||||
RBAM_010330__ 301 GCCATCCGCGTATTAAGACCGCTCGAAGGCGATACGTATGTCATTTTGAC 350
BSNT_01723___ 351 CTTGTGGGAAACGGAAAGCGCCTTTCAAGACTGGCAGCAGTCCGGTTCTT 400
|.||||||||..|||||..||||||||.||.|||||||||||....||||
RBAM_010330__ 351 CCTGTGGGAAGAGGAAAAAGCCTTTCAGGATTGGCAGCAGTCAAACTCTT 400
BSNT_01723___ 401 ACAAAGAAGCCCACAAAAAACGCGATACATCTGCCGGAATTGACACAACG 450
|..|.|||||.||.||||||||||..||||||||.||.||.|||||.|||
RBAM_010330__ 401 ATCAGGAAGCTCATAAAAAACGCGGAACATCTGCAGGCATCGACACGACG 450
BSNT_01723___ 451 TCGATCTTCTCCCGGCCTTCCTATGTCACCACATATTTCGCTGTCGAATA 500
||.||.||||||||.||.||.|||||.|||.|.||||.||| ||||
RBAM_010330__ 451 TCTATTTTCTCCCGCCCGTCTTATGTAACCGCTTATTACGC-----AATA 495
BSNT_01723___ 501 G----- 501
|
RBAM_010330__ 496 GACTGA 501
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