Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01723 and RBAM_010330

See Amino acid alignment / Visit BSNT_01723 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:25
# Commandline: needle
#    -asequence dna-align/BSNT_01723___yhgC.1.9828.seq
#    -bsequence dna-align/RBAM_010330___yhgC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01723___yhgC-RBAM_010330___yhgC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01723___yhgC-RBAM_010330___yhgC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01723___yhgC
# 2: RBAM_010330___yhgC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 506
# Identity:     386/506 (76.3%)
# Similarity:   386/506 (76.3%)
# Gaps:          10/506 ( 2.0%)
# Score: 1478.0
# 
#
#=======================================

BSNT_01723___      1 ATGAAGGTTTATATTACATATGGGACAGCCGATTTTTTAAAAACGATCGT     50
                     ||||||||||||||||||||.||||||||||||||||||||.|||||.|.
RBAM_010330__      1 ATGAAGGTTTATATTACATACGGGACAGCCGATTTTTTAAAGACGATTGC     50

BSNT_01723___     51 ACAGAAGCATCCCTCAGAAAATATCCTTTTGATGCAGGGGCAGGAAAACG    100
                     |.||||.||.||....||.|||||..|..|||||||.|||..|||.||.|
RBAM_010330__     51 AAAGAAACACCCGAGTGAGAATATGGTGCTGATGCAAGGGGGGGATAATG    100

BSNT_01723___    101 CCATTTTAATTCATGAAACAAACGGAGATACCGTTTTCCAGGCACCACAC    150
                     |..|||||||||||||||||||.|||||.||||||||.|||||.||.||.
RBAM_010330__    101 CGGTTTTAATTCATGAAACAAATGGAGAAACCGTTTTTCAGGCGCCCCAT    150

BSNT_01723___    151 GCTTATGAAGTCATTGACCAAGTCGGAGAGATCAAACATCCCGGTTTTGC    200
                     .|.||||||..|||.|||...|||||.||.||||||.||||.||.|..||
RBAM_010330__    151 TCCTATGAAAGCATCGACAGCGTCGGGGAAATCAAAAATCCGGGCTACGC    200

BSNT_01723___    201 AGTATTGAACAATATTGCCGTTACTCAGGAAGGGCGTCCGCTGTTTGAAA    250
                     .||..|.|||||.||.||||||||.||||||||.||||||||||||||||
RBAM_010330__    201 CGTCCTCAACAACATCGCCGTTACCCAGGAAGGCCGTCCGCTGTTTGAAA    250

BSNT_01723___    251 ACAGATTTAAAAACAGAGCGGGAAAAGTCGAAAACGAGCCTGGCTTTGAA    300
                     ||.|.|||||||||.|.||.||.|||||.|||||.||.||.||.|||.||
RBAM_010330__    251 ACCGGTTTAAAAACCGCGCCGGCAAAGTGGAAAATGAACCCGGTTTTCAA    300

BSNT_01723___    301 GCAATTCGAGTGCTCCGTCCGCTTGACAGTGACACCTATGTCATTCTGAC    350
                     ||.||.||.||..|..|.|||||.||..|.||.||.|||||||||.||||
RBAM_010330__    301 GCCATCCGCGTATTAAGACCGCTCGAAGGCGATACGTATGTCATTTTGAC    350

BSNT_01723___    351 CTTGTGGGAAACGGAAAGCGCCTTTCAAGACTGGCAGCAGTCCGGTTCTT    400
                     |.||||||||..|||||..||||||||.||.|||||||||||....||||
RBAM_010330__    351 CCTGTGGGAAGAGGAAAAAGCCTTTCAGGATTGGCAGCAGTCAAACTCTT    400

BSNT_01723___    401 ACAAAGAAGCCCACAAAAAACGCGATACATCTGCCGGAATTGACACAACG    450
                     |..|.|||||.||.||||||||||..||||||||.||.||.|||||.|||
RBAM_010330__    401 ATCAGGAAGCTCATAAAAAACGCGGAACATCTGCAGGCATCGACACGACG    450

BSNT_01723___    451 TCGATCTTCTCCCGGCCTTCCTATGTCACCACATATTTCGCTGTCGAATA    500
                     ||.||.||||||||.||.||.|||||.|||.|.||||.|||     ||||
RBAM_010330__    451 TCTATTTTCTCCCGCCCGTCTTATGTAACCGCTTATTACGC-----AATA    495

BSNT_01723___    501 G-----    501
                     |     
RBAM_010330__    496 GACTGA    501


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